Bufo gargarizans (Asiatic toad): 122932465
Help
Entry
122932465 CDS
T07965
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03013
Nucleocytoplasmic transport
bgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122932465 (SRRM1)
03015 mRNA surveillance pathway
122932465 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122932465 (SRRM1)
03041 Spliceosome [BR:
bgar03041
]
122932465 (SRRM1)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122932465 (SRRM1)
Spliceosome [BR:
bgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122932465 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
122932465
NCBI-ProteinID:
XP_044142823
LinkDB
All DBs
Position
3:complement(311195905..311236775)
Genome browser
AA seq
929 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVEMSKVNLEVIKPWITKRVTEIL
GFEDDVVIDFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLATLKKQDDDKDRRDKEDRDKRDRSRSPRRRKSRSSSPRR
RSSSPRRRSPSRRERKRSPSHSPPPRHKTKSPSPSPPPPPPPPPVLDKGELEVQEPEPSL
KVKEPFVQEATSSSDIVKISKPDSAPDTKDVSPEPNLRKVKEERHRHRSRTRSKSRSRSP
SHSRPRRRHHSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHKRSRSPVRRRRRSSA
SLSGSSSSSSSSRSPPPPPKKQPKRISSSPPRKPRRSSPSASPPRRRYRQSPPPSPPQKR
RSPSPQQSLRSRKPRGSVSPAHTSASKHKIIEKRKTPSPPPKPRRREISESDDDKGGKMG
TSDSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRAGVKNGEVGRRRRQSTSRSPSPSRK
RPKDPSPQMQTVKRWQSPPPKSRRRRSPSPPPPPRRRRSPSPAPPPRRRRSPSPQRRRSP
SPCRQSPSQRRYSPPIQRRYSPSPPPKRRTSSPLAQQPSKRRVSQSPPPAKRRVSQSPPP
AKRRVSQSPPPAKRRVSQSPPVKHKGSPGGKRRSPSVPSKHRKGSSPSRSGREARSPQQP
KRLSHSPRPRVARSPESPPVHRRVPSSSPPRIQQSPSPSTRPIRRVSRTPEPKKLKKDSP
SPGPRRGSSSRSVSRSPEPAPKNQAVSPSRSRSRSANWSPAPAPAKKVKSATPSPSLAQT
SDQEAGGGKKKKKKKDKKHKKEKKHKKHKKHKKEKAAAAASPEVTEANVETEAKKETESD
GEGTLDDLEKHLREKALRSMRKAQVSPQS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcttcttccgcggcaccagtgcggagcaggataatcgtttcagcaacaag
cagaagaagctcttgaagcagcttaagtttgcagaatgcctggaaaagaaggtggaaatg
agcaaagtaaatctggaggtcataaaaccttggataacgaagcgtgtgacagaaatattg
ggcttcgaggatgatgtggttatagactttattttcaaccagctggaagtgaagaaccca
gattccaaaatgatgcagattaacttgactggctttctaaatggcaaaaatgcccgggaa
ttcatgggagagttgtggccgcttcttttgagtgcacaagaaaatattgctggcattcct
actgcatttcttgaattaaaaaaagaagaaataaaacagagacagattgagcaggagaag
ttggcaactctgaagaagcaagacgatgataaagatagaagagataaagaggacagagat
aaaagagatcgatctagaagtccaagaaggcgaaaatctaggtcatcttcaccaaggagg
agatcatcctcaccgcgaaggaggtctccaagtaggagagagagaaaaagaagcccctct
cattctccacctccacggcacaaaacaaaaagccctagtccttctcctcctcctcctcca
cctccacctccagttcttgacaagggagagctggaagttcaagaacctgagccatctcta
aaagtaaaggagccatttgtacaagaggccacatcgtctagtgacatagttaagatctct
aaacctgattctgcaccagatactaaggatgtatcgccagagccaaatttgcggaaagtt
aaagaggagcgacatcgccacaggtctcgtacacgttcaaagtccaggtctcgttcccct
tcccattctagaccacggagacggcatcattcgagatccaggtcttacagtccaaggagg
cgtcctagcccccgacgtagaccatctcctcgaaggagaagcccccctcgacgaatgccg
cctcctcctagacacaagagaagcagaagtcctgttagacgtaggagacgttcatcagca
tctttgtctggaagtagtagctcatcatcttcatccagatcaccgccaccacctcctaag
aagcaacccaaaagaatttcttccagcccaccacgtaagccacgccgctcatctccatct
gctagtcctccacgaaggcgatatagacagtctccaccaccaagtcctccacagaaaagg
cgttccccatctccacagcagtcattacgttcaagaaagcctcgagggtctgtttcacct
gctcatacttcagcatcaaagcacaaaattatagagaagcggaagacgccatcacctcct
ccaaaaccacgcagaagggaaatatcagagtctgatgatgataagggaggcaaaatggga
acatcagattccgtacagcagcgtcgtcagtataggagacaaaatcagcagtcctcatca
gattctgggtcatcctcctcatcagaagatgaacggccaaagcgcgcaggagtaaagaat
ggggaagttggcaggagacgtaggcagtctacatcaagaagtccgtccccttctcgaaaa
cggcccaaggatccttctccacagatgcagactgtgaaaaggtggcaatcacctccgcct
aaaagccgcaggcggaggagcccatcacccccaccaccacccagaaggagacgcagccct
tcccctgccccacccccgaggagaagacgttctccttctccacagaggcgcaggtcccct
tctccttgtaggcagtctccctctcaaagacggtactcaccaccaattcaaagacgatac
tctccttctccacctcctaaaaggagaacttcttcaccactagctcagcagccttcaaaa
cgcagagtatcacagtcacctcctccagcaaaacgcagagtatcacagtcacctcctcca
gcaaaacgcagagtatcacagtcgcctcctccagcaaaacgcagagtatcacagtcacct
ccggtaaaacataaaggatctcctggaggaaaaagacggtctccatctgtaccatccaag
cacagaaaaggatcatccccaagtagatctggaagagaggcacgttctcctcaacagcct
aaacgtttatcacactctccacgtccaagagttgcacgtagccctgagagccctccagta
cataggagggtaccatcttcttcacctccaaggatccaacagtccccttctccaagtaca
cggcctattcgacgagtgtccagaacaccagaaccgaaaaaactgaaaaaagattctcca
agtccaggtccgagaagaggctcgtcttcaagatctgtttctcgatcccctgaacctgct
cctaaaaatcaagctgtgtcaccatctcggtctcgatcacgctctgccaactggtctcca
gctccagccccagctaagaaagtcaagagcgccacaccaagcccatctcttgctcagaca
tcagatcaagaggccggtggagggaaaaagaaaaagaagaaaaaggacaagaaacacaaa
aaagaaaagaagcacaagaaacacaaaaaacataagaaagagaaggctgcagcagctgct
tctccagaggtcactgaggcaaatgtggaaactgaagcaaagaaggagactgaaagtgac
ggagaaggaactctagacgatttggagaagcatttacgagagaaggctctgcgttccatg
agaaaagcgcaagtttcccctcagtcctaa
DBGET
integrated database retrieval system
