Bufo gargarizans (Asiatic toad): 122932534
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Entry
122932534 CDS
T07965
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03030
DNA replication
bgar03420
Nucleotide excision repair
bgar03430
Mismatch repair
bgar03440
Homologous recombination
bgar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122932534 (RPA1)
03420 Nucleotide excision repair
122932534 (RPA1)
03430 Mismatch repair
122932534 (RPA1)
03440 Homologous recombination
122932534 (RPA1)
03460 Fanconi anemia pathway
122932534 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgar03000
]
122932534 (RPA1)
03032 DNA replication proteins [BR:
bgar03032
]
122932534 (RPA1)
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122932534 (RPA1)
Transcription factors [BR:
bgar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122932534 (RPA1)
DNA replication proteins [BR:
bgar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122932534 (RPA1)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122932534 (RPA1)
MMR (mismatch excision repair)
122932534 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
122932534 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Por_Secre_tail
RADX
Motif
Other DBs
NCBI-GeneID:
122932534
NCBI-ProteinID:
XP_044142942
LinkDB
All DBs
Position
3:499423392..499497769
Genome browser
AA seq
607 aa
AA seq
DB search
MALPKLSEGAIAAILQGDTSCKPILQVINTRPINTANGPPRYRLLMSDGLNTLSSFMLAT
QLNSLVDENRLAANCICEVSRYIVNNLKDGRRVIIIMELDVLKSADSVYGKIGNPQPYND
GQGAPQPAAVAPAPPPPSKPAQNSAPLLSNKGLSKPFGGGGAPNTPGGSQSKVVPIASLN
PYQSKWTIRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNDQADKFFSLIEV
NKVYYFSKGTLKIANKQYTAVKNDYEMTFNSETSVIPCDDSSDVPTVQFEFVPVSELENR
NKDTLLDIIGVCKSFEDVTKVTIKSNNREVSKRTIHLMDTSGKVVSTTLWGEDADKFDGS
RQPIVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRGWFDSEGQVLEGSSISESR
GGMAGGGNTNWKSLLDVKNDNLGHGEKADYFTSVATIVYLRKENCLYQACPSPDCNKKVI
DEHNGLFRCEKCNKDFPNFKYRLILSANIADFGENQWITCFQESAEAILGQNAAYLGELK
DKNEQAFEEVFQNANFRSYTFRIRVKLEMYNDESRIKATAMDVKPVDYKEYSRRLIMNIR
KLASQGA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccaaagctgagtgaaggggccatagcggctatcttacagggcgatacctca
tgcaagcctattctgcaggtcattaatacacgtccaatcaacactgcgaatggtcctccg
cgctatcgactgctgatgagcgatggattgaacactctttcatcttttatgttggcaaca
cagctgaacagtcttgtggatgagaaccgccttgcagctaactgcatctgtgaggtctcg
cggtacattgtgaacaacttgaaagatggaaggagagtgattattataatggaattggat
gtgctgaagtcagcagattctgtttatggaaagattggaaatcctcaaccatacaatgat
gggcaaggagcaccccagcctgcagctgttgctccagctccaccacctcctagcaagcct
gcacaaaactctgctccacttttatccaacaaagggctatctaaaccatttggaggaggg
ggtgcgccaaatacacctggtggctctcagagtaaagttgtgccaattgccagccttaac
ccttaccaatcaaagtggactatccgagcacgagtgaccaacaaaggccagatacgtaca
tggagcaattcccgtggcgaagggaagttattttccattgagatggtggatgagagtggt
gagatccgggctactgctttcaatgatcaagctgacaagtttttctctcttattgaagtg
aataaggtgtattacttctcaaaaggcactttgaagattgctaacaagcagtataccgct
gtaaagaatgactatgagatgactttcaatagcgagacctctgttatcccttgcgatgac
tcttcagatgtccctacggtgcagtttgagtttgttcccgtttctgagcttgaaaacagg
aataaagacaccctattagatatcataggagtttgcaaaagttttgaagatgtcactaag
gtgacaataaaatcaaacaaccgtgaagtttcaaagagaacgatccacttaatggataca
tcgggcaaagtggtttccacaactctatggggtgaagatgcagataaatttgatggctcc
agacaacctattgtggcaatcaaaggagcgcggctttcagattttggggggagatccctg
tctgttttatcatccagcacagtcatgataaatccagatattcctgaagcattcaagctc
agaggatggtttgactcggagggtcaagtacttgaaggatcctctatttcggagtctcgc
ggaggtatggcaggaggagggaacacaaactggaagtctttgctggatgttaagaatgat
aacctgggtcacggagaaaaagctgattattttaccagtgtggcaacaattgtttatctc
cggaaagagaactgcctgtatcaggcctgcccttctccggattgtaataaaaaggtgatt
gatgaacataacggacttttccgctgtgagaagtgcaacaaagattttcccaactttaaa
taccgtctcattctatctgcaaatattgcggattttggagagaatcagtggattacttgt
tttcaggagtcagctgaagccatccttggccagaatgctgcttatcttggagaactcaaa
gacaagaatgaacaagcttttgaggaggtatttcaaaatgccaacttccggtcttacacc
tttagaattcgagtcaaattggagatgtacaatgatgaatcccgcatcaaagcaacagcc
atggatgtgaaaccagtggattacaaagaatactccagacgtcttatcatgaatatccgg
aaactggcctctcaaggagcctaa
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