Bufo gargarizans (Asiatic toad): 122933129
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Entry
122933129 CDS
T07965
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122933129 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgar03021
]
122933129 (SMARCC2)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122933129 (SMARCC2)
Transcription machinery [BR:
bgar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122933129 (SMARCC2)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122933129 (SMARCC2)
PBAF complex
122933129 (SMARCC2)
GBAF(ncBAF) complex
122933129 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Chromo
Motif
Other DBs
NCBI-GeneID:
122933129
NCBI-ProteinID:
XP_044143860
LinkDB
All DBs
Position
3:complement(157825109..157904924)
Genome browser
AA seq
1189 aa
AA seq
DB search
MAVRKKDGGPNVKYYESSDTISQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPMKCFLDFKVGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMNIEKSLVQNNCLSRPNIYLHPDIDSKLQSKLKDIVKRHQGTVTEDKSHASHVVVP
VPGSLEEEEWVRPILKRDKQVLLHWGYYPDSYDTWIPSSEVEAPVEDAPTPEKPRKVHAK
WILDTDLFNEWMNEEDYEVIDERSTVTRRKKISAKTLTDEVRSLLQTDLVEVSSPDSDRR
DKKGPNNKKRKRSPSPPPSAEAKKKNVKKGPTTPYNKSKRGHRDEEQEDLTKDMDEPSPV
PNVEEVTLPKTVNTKKDSESAPVKGGTVTDLDEQEDESMDAITKEEEENSTVIKSEQVKT
SDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFM
IDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTS
HFHVLADTPSGLVPLQTKTPQTSASQQMLNFPDKNKEKPTDLQNFGLRTDMYSKKNTTSK
SKSAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE
DSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALDEFSKMKEEVPAA
LVEAHVRKVEDAAKMTGKADPSYGLESSGIAGTTCEENERIDGDTESRGPPCINKENSTE
EPPPEPQPTEEKKEPKDSPSESVSEDDTKERISDVTKKEDDKNKDDTDKDSDKSDVDMAD
GEKVSDSKEGSEETDKEETEVKNKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEL
RARQQHFQQIQSQHQQQHQTPPGGQPVPPVAHSIPVPQQSVTPGPGNSANSSEGIVQPSI
PSVQPPVNSQQQGATQPSPAHSSGAYTVQPTPNPMIPTAVPVPSQPPVPGNQYPSMPLPV
PFNMSSDLVDSLHHNPSTNPYSIHHSMHGTFPPTACRVGGAPPLTHNPAITMSPAPPNLP
SSLGSAASHSPAIVAAMQGGSAITSSPVSDPATSLPPESMGNTVAPAQQ
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggcccgaacgtgaaatattacgagtcctctgacacc
atttctcagttcgacaacgtgcggctatggctggggaaaaactacaagaagtacatccag
gcagagccccccaccaataagtctctgtccagcctggtggtccagctcctgcagttccag
gaagaagtgtttggaaagcatgtcagcaatgctcctcttaccaaactgccgatgaaatgc
ttcctagatttcaaagtgggtggagctctttgtcatatcctcgctgctgcttataaattt
aagagtgaccaaggatggcgtaggtttgatttccagaacccttcacgcatggatcgtaac
gtagaaatgttcatgaacattgagaagtctcttgtgcagaacaactgtctttcccgacca
aatatataccttcatccagacatagactcgaaactgcagagcaagctgaaagacattgtg
aaaagacaccagggcacagtaacggaggacaaaagtcatgcatcccatgtcgtcgttcca
gttcctggctccttggaggaagaggaatgggtgagacccatactgaagagagacaagcag
gttcttcttcactggggttattatccagatagttatgacacttggattccatctagtgag
gtagaagctccagttgaggatgcacctaccccagaaaagccccgcaaggtccatgccaag
tggattcttgacactgatctctttaatgagtggatgaatgaagaagattatgaggtgatt
gatgagaggagtacagtgacacgccgcaagaagatctctgccaagaccttgactgatgaa
gtgagatcattgctccaaactgatctagtagaggtaagcagtcctgactcagatcgcagg
gacaagaaaggacctaataataaaaagaggaaacgttctccttcacctcctccgagtgca
gaagcaaagaaaaagaatgtcaagaagggaccaactactccttataacaagtcaaaaagg
ggtcatcgcgatgaagaacaggaggatttgacaaaagatatggacgaaccttccccagtg
cctaatgtagaagaagttacgctcccaaaaacggttaataccaagaaagattctgagtcg
gccccagtgaaaggtggcaccgtgacggacctagatgaacaggaagacgagagtatggac
gctataactaaggaagaagaagagaactctacagtgatcaaaagtgaacaagtgaagacc
tctgaccttcatgaggataatgtaactgaacaaacacaccacattatcatccccagctat
gctgcatggtttgattataacagcgtacatgccattgagcgtagagcactacctgagttt
ttcaatggcaagaacaagtctaaaactccagagatatatttagcatatcgaaacttcatg
attgacacatatcggctcaaccctcaggaatacctcacttcaacagcgtgccgtcggaac
ctggcaggggatgtttgtgccattatgagggttcatgccttcttggaacagtggggtcta
atcaactatcaggttgatgctgagagccgcccaacacccatgggaccaccacctacttct
catttccatgttttagctgataccccatcagggctggtaccactgcaaactaaaacacca
cagacctctgcttcacaacagatgctgaatttccctgacaagaataaagaaaaaccaacg
gacctacaaaactttgggcttagaactgatatgtacagcaagaagaacaccacttccaag
agtaaatctgctgcaagtgccacgagggagtggacagaacaggagactctactacttctt
gaggctctagaaatgtacaaggacgactggaacaaggtgtctgaacacgttggcagccgt
actcaagatgaatgtattttgcatttccttcggctgcccattgaagatccttatttggag
gactctgaagcgtcacttggtcctctggcctatcaacctataccatttagccaatctggt
aacccagtaatgagcacagtagctttcctagcatctgtggtggaccctcgtgtggcatct
gctgctgccaaatctgctcttgatgagttctccaagatgaaggaagaggtccctgcagca
ttggtggaagctcatgttcgcaaagtggaagacgctgccaaaatgacgggtaaagctgac
cccagttatggacttgagagcagtggtattgctggaacaacctgtgaagaaaatgagcgg
atagatggggacacagaaagcagagggcctccgtgcataaacaaggagaatagtacagaa
gagccccctcctgaaccacagcctacagaggaaaagaaagagccaaaggattctcccagt
gaatcagtctctgaggatgacacaaaggagcgcataagtgatgttacaaaaaaagaagat
gataagaacaaagatgacacagataaggactcggacaagagtgacgttgatatggctgat
ggagaaaaagtttctgacagcaaagaaggatcagaagaaaccgataaggaagagactgaa
gtaaagaataaggtagaaagagacattggagaaggcaacctgtccacagctgctgctgct
gctctggctgctgctgctgtcaaagctaagcacctggcagcagtggaggagcgcaagatc
aagtccctggtggctctgctagtggagacccagatgaagaagctggaaattaaactgagg
cactttgaagagcttgaaaccatcatggacagagagagggaagctcttgaataccaaaga
caacagcttctagcagacagacaatcatttcacatggagcagttaaaatatgcagagctg
agggcccgtcagcagcacttccagcagattcaaagccaacaccagcagcaacaccagacc
cctcctggtggtcagcctgtgcccccggtggctcactctatcccagtgccacagcagtct
gtcacacctgggcctgggaattcagcaaacagttcagaggggattgttcagccaagtata
ccttcagtgcagccaccagtgaatagtcagcagcaaggagcaacacagcccagtccagca
catagttctggtgcatacacagttcaaccaactcctaacccaatgatcccaacagcagtg
ccagttccttcccagccaccggtgcccggtaatcagtaccccagcatgcctctgcctgtt
ccatttaatatgagtagtgacttagtggactctcttcatcacaacccttcaactaacccc
tactcaattcaccattccatgcatggcaccttccctccaacagcatgccgtgttggtggg
gcacctccacttacacataaccctgccataactatgtctccagcccctcctaacttgcca
tcctccctgggttcagctgcatctcatagccctgccatcgtagccgcaatgcagggaggc
tctgccatcacttccagtcctgtttcagatcctgcaacatctctgcctccagaatccatg
ggaaacacagttgctcctgcccagcagtaa
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