Bufo gargarizans (Asiatic toad): 122933422
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Entry
122933422 CDS
T07965
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgar03000
]
122933422 (SOX13)
Transcription factors [BR:
bgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122933422 (SOX13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122933422
NCBI-ProteinID:
XP_044144339
EnsemblRapid:
ENSBGGG00000003785
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All DBs
Position
3:419554643..419625036
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AA seq
574 aa
AA seq
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MDSSVKQDALKCYSGNLQEQSVALKVPTSPAEFCPKMEEDSKDEIFKHVTTLQQNSPLRE
ASYITDSWSIAPLANGLSPEVSKTINDAMPALEKLLTSEWKEKLLGNGALHSKDVKGTHE
SLAEKELQLLLMIRQLAGLRDQLLSAHSEHRNMAAMLLEKQQQQMELARQQQEQIAKQQQ
QLIQQQHKINVLQQQIQQVNMPYVMIPAFPSAQAVSTDPQMSPLMQQIPCKPVDYPMSLI
HNPTPPRASTTGKQEPSQPLNLTAKPKSEQSPRSSCSPTLKSSPAPSNGVGNCIDNTSSP
ARSNLPLGFLGEGDAITKAIQEARQLLHGQNKTPEQRDGHSVKDVFESVTQRELHDESSL
QESEDSLLRCGMDIDGSRHFSESRGSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISK
ILGSRWKAMSNSEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKAL
MKNRRQDSRHGYALPSQGSVASPPSPSGFQSLTGMSHLPTSDIYQAQDGNLPVILNTRSL
QNQDPRGPVPCMPDVCSDSEDSIKSEGELVVITD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcagtaaagcaggatgctctaaaatgctattctggaaacctacaggagcaa
agtgttgctttgaaggtgcctacctctccagcagaattctgccccaagatggaggaagat
tctaaagatgaaatctttaaacatgtgaccactttacaacagaattcacctcttcgggaa
gcctcatatatcactgattcttggagtattgcacctctggctaatggactaagtcctgaa
gtgagcaaaaccataaatgatgcaatgccagccctagagaaactgctcactagtgagtgg
aaagagaaactactgggaaatggagcacttcacagtaaagatgtgaaaggcactcatgag
agcctggcagagaaggagctgcagttgttgctgatgatccgtcagctggcgggactgagg
gaccagttgcttagtgcacactctgaacataggaacatggcggccatgttgttggagaaa
caacagcagcagatggagcttgcaagacaacaacaggagcagatcgctaaacagcagcag
cagctgatccagcagcagcacaaaatcaatgtgttacagcagcagatccagcaagtaaac
atgccgtatgtcatgattccagcattcccttcagctcaggcagtttctacagatcctcag
atgtcacctcttatgcaacaaattccttgcaagcctgttgactatcccatgtcgctgatt
cataatcccactccaccaagagcctctactactggaaaacaggaaccatctcagcctttg
aatctgacagccaaacccaaatctgagcagtctccaagatcaagttgctctccaactttg
aaatcttcaccagcaccaagcaatggtgttggaaattgcatagataatacatccagcccc
gcaagatccaatctgccacttggtttccttggtgaaggagatgccattactaaagcaata
caagaagcaaggcagcttcttcatggacagaacaaaacaccagagcagcgtgatggccac
agtgttaaggacgtgtttgaatcagtaactcaaagggaacttcatgacgagtcttctttg
caagaaagtgaagactctttgctgcgatgcggcatggacattgatggatctcgccacttc
tctgagagccgtggcagccatattaagaggccgatgaatgcttttatggtatgggcaaag
gatgaacggcgaaagatcttgcaagcattcccagacatgcacaattccagcatcagcaaa
attcttggctctcgctggaaggctatgagtaattctgaaaagcagccatactacgaagaa
caggcacggctgagccgacagcacttggagaagtatcctgactacaaatacaagccacga
ccaaaacgtacctgcattgtggagggaaagaggctgagagtgggagaatacaaagctctg
atgaagaaccggagacaagactcgcggcatggatatgctctcccatcccaggggtcggtg
gcaagtcctccatcaccatctggattccaatctctgacaggaatgtctcatctgcccact
tctgatatttaccaagcccaggatggcaatttgccagtaatcctcaacaccagaagtctt
caaaatcaggatcccagagggcctgtgccatgtatgcctgatgtctgcagcgactctgaa
gactctatcaagagtgaaggagagcttgtagttataacagattaa
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