Bufo gargarizans (Asiatic toad): 122933987
Help
Entry
122933987 CDS
T07965
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04136
Autophagy - other
bgar04140
Autophagy - animal
bgar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122933987 (ATG16L1)
04136 Autophagy - other
122933987 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122933987 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bgar04131
]
122933987 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
bgar03029
]
122933987 (ATG16L1)
Membrane trafficking [BR:
bgar04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122933987 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
122933987 (ATG16L1)
Mitochondrial biogenesis [BR:
bgar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122933987 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
WDR90_beta-prop_4th
eIF2A
Beta-prop_RIG_2nd
WD40_RFWD3
NBCH_WD40
PAC11
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_DCAF12
CCDC93_CC
ASA1
CCDC39
ANGPTL8
CCDC186_middle
DUF6468
HEF_HK
BEGAIN_coil
AP5B1_middle
V_ATPase_I
Rv0250c
DUF1664
FliD_N
DUF7310
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
122933987
NCBI-ProteinID:
XP_044145021
LinkDB
All DBs
Position
4:complement(107471650..107530720)
Genome browser
AA seq
621 aa
AA seq
DB search
MAAGCRAGAYPGWKVHISRELRRRDREQRQAFEELILQYNKLLEKSDFQSVLADKLQTDK
YDQSRHDISPGPDGMRHEALLQDMAQMRIKHQEELTDLHKKRGELAQTVIELNNQMQQKD
KEIQANKETIEEYQRTIGELQTECQDLRNKLQELERINQTLKDEYDALQITFNALEEKLR
KTTEDNQELVTRWMAEKALEANRLNAENEKDTKRRQAKLQKELAEAAKEPVSVEQDDDIE
VLNDNADPSGDAMAPPVSGRMSGKRLSQPAVGGLLDSITNMFGLSESPLLGHHSDTSRRR
SISSFPASQDSTDAQAGGNREVRVPVTALHSFDAHDGEVNAVRFSPGSRLLATGGMDRRV
KLWEVIAERCEAKGSLTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDLRLRHTLTG
HSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRNKVCIKTVFAGSSCNDIVCTEQCVMSGH
FDKKIRFWDIRTECIVRELELQGRITALDLNHERTELLSCSRDDLIKIIDLRASAVRQTF
SAQGFKCGSDWTRVIFSPDGRYVSAGSADGALYFWNVMTGKVEKILGKQHCSSINAVAWS
PSGAYVVSVDKGSKGVLWSDF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggctgcagggcaggggcttaccctggatggaaggttcacatctcccgggag
ctgaggaggagagaccgggagcagagacaggccttcgaggagctcatcctacagtataac
aagttgcttgaaaagtctgactttcaatctgtattggctgacaagctgcaaacggacaag
tacgatcagagccgccatgacatcagcccaggaccagatgggatgcgacatgaggctctg
ctacaggacatggctcagatgaggataaagcaccaagaggagttgactgatcttcataaa
aagcgtggcgagctagctcagacagtgatagaactgaacaaccagatgcagcagaaggac
aaagagatccaagccaacaaggaaacgatagaggaatatcagcgcacaatcggtgaactc
cagacagagtgtcaggatttacggaataagctgcaggaacttgagcgcatcaaccaaacc
ctgaaggacgaatacgacgctctgcagatcacttttaacgcactagaagagaagctgcgg
aaaactacagaggataaccaggagctggtcactcgctggatggcagagaaagctctggaa
gccaaccggctcaatgctgaaaatgagaaggacacaaagaggaggcaggccaaactacag
aaagaactggctgaagcagccaaggaaccagtgtctgtagagcaggatgatgatattgaa
gtattgaatgataatgcagatccctccggggatgccatggcccctccagtttctggacga
atgtctggtaagagactctctcagcctgccgtaggaggccttctggactctatcactaat
atgttcggcttgtctgagtctcccctcttgggccatcattctgacacctccaggaggcgc
tctatatcttctttcccagcctcacaggacagcacagatgctcaggctggaggtaaccgg
gaggttcgcgttccagtgacggctcttcactcatttgatgctcatgatggcgaggtcaat
gcagtgcggttcagcccaggctcacgactgttggctacaggagggatggaccgccgggta
aagctgtgggaggtgattgcagagaggtgcgaggcaaagggatcattgacgggaagcaat
gcaggcattacaagcatagagtttgacagtgcaggttcctaccttttggctgcgtctaat
gattttgccagcaggatctggacagttgatgaccttcgccttcggcatacactgacggga
cacagtggaaaggtgttgtcagctaaattcctactggacaacgctcgcatcgtgtcagga
agtcatgaccgtactttgaaactctgggatctgcgtaacaaagtgtgtatcaagactgtt
tttgctggctctagctgcaatgacattgtctgcacggagcagtgtgtgatgagcgggcac
tttgacaaaaagattcgtttttgggatataagaacggagtgtatagtacgggagttggag
ctacaaggtagaatcacggctctagatctgaaccacgagaggacggagttgctcagttgc
tcccgggacgacctgatcaagatcatagatttgcgtgccagtgcagtacgacagaccttt
agtgcgcaaggtttcaagtgtggatctgattggactagagtcatatttagccctgatggt
agatatgtgtcagccgggtcagctgacggggctctatatttctggaatgtgatgactggg
aaagtggaaaagattcttggcaagcagcattgttccagtattaatgccgttgcctggtct
ccctctggtgcctacgtagtgagtgtggacaaaggaagcaaaggcgtattgtggtcggac
ttttga
DBGET
integrated database retrieval system
