Bufo gargarizans (Asiatic toad): 122934110
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Entry
122934110 CDS
T07965
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122934110 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122934110 (HBS1L)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122934110 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
DO-GTPase2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122934110
NCBI-ProteinID:
XP_044145249
LinkDB
All DBs
Position
4:complement(322074214..322178848)
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AA seq
682 aa
AA seq
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MARHRNVRGYNYDDDFCDDDMYGQSVEDDYCISPATAAQFIYSKRDRLSSCTEPLEEEED
ECEDDDKSKASCTTLSPLDQARLYSCLDHMREVLGESVSEKIMIDAVLQSGFDVAKALDR
IFKQDSNSSKKPVTQDVSSAERPGKGKAREMPSPDAQIVPKIAKLTVSGNKQTMGFSVPS
SAPSETNGQSVTACTRSQATDDPMEETDNSVLCPSSSNTPQISEDLNSTPSQGKSSGKSK
RKINVKEELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGHVNKRTMHKYEQESKKA
GKASFAYAWVLDETGEERQRGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQA
DVAILVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVVVNKMDQVNWQEERFREVT
SKLGHFLKQAGFKDSDVYYIPTSGLSGENLSKKSEISELTSWYKGPCLIDQIDSFKAPKR
SVEKPFRLCASDVFKDQGSGFCVTGKIEAGYIQTGDHLVVMPPNDRCTVKGITLHDEAVD
WAAAGDHVSLTLTGVDIIKINVGCVFCSPSEPIRACTRFRARVLIFNFDVPVTQGFPVII
HYQTVSEPATIRRLISVLHKSTGEVVKKKPKCLTKGMNAMIELQTQRPIALELYKDFKEL
GRFMLRYSGSSIAAGVVTEIKE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcaccgcaatgtgcgcgggtacaactatgatgacgatttctgtgatgatgac
atgtatggacagtcagtagaggatgactactgtatctcaccagcaacagctgctcagttc
atatattctaaaagggacaggctttcaagctgtacagagcccttggaagaggaggaagat
gagtgtgaagacgatgacaaatccaaagcttcctgtactaccctaagtcctcttgatcaa
gctcggttgtattcatgccttgatcacatgagagaagtcttaggagaatctgtatcagag
aagatcatgattgatgcagtattgcaaagtggctttgacgtggcaaaggccctggaccga
atctttaagcaggacagcaactccagcaagaagcccgttactcaagatgtctccagtgct
gaaagaccaggaaaaggaaaagcaagagaaatgccatctccagatgcacagattgttccc
aaaattgccaagttgactgtttctggaaataagcaaacaatgggattttctgtaccaagc
agtgcaccatctgaaacaaatggtcagagtgttactgcatgtacgagaagccaggctacg
gacgaccctatggaagaaactgacaacagtgtgctatgtcccagctcatctaacacacct
cagatctcagaagacctgaattctaccccatcccaagggaaaagttctggcaaatccaag
cgaaagataaatgttaaagaagagctggagaaaagacaaggaggaaaacagctactgaac
cttgttgttataggtcatgttgatgccgggaaaagtactcttatgggccatttattatat
ctcttggggcatgtgaacaaaaggactatgcacaaatatgagcaagagtccaagaaagca
ggaaaagcttcttttgcatatgcgtgggtgctagacgagacgggagaagaaaggcaaaga
ggagtaactatggatgtaggcatgaccaaatttgaaacgaagactaaagttattactctg
atggatgcaccggggcacaaagatttcatcccaaacatgataactggagctgcacaagct
gacgtggccattttggttgtagatgccagtcgtggggagtttgaagcaggctttgaagct
ggtggacagacacgtgaacatgcacttctggtccgatctcttggagtgactcagttagct
gttgtagtcaataaaatggatcaggttaactggcaggaggaaaggtttcgggaagttact
agtaagcttggacacttcctaaagcaagctggtttcaaggacagtgacgtttattacatt
cctaccagtggtcttagtggggaaaatttgtcgaaaaagagtgaaataagtgaactgaca
agttggtacaaaggaccgtgccttattgaccaaattgattcgtttaaagctccaaaacgt
tcggttgagaaaccttttaggttgtgtgcatctgatgtttttaaagatcaaggttctgga
ttttgcgtgactggcaaaatagaagctgggtacatccagactggagaccacttagtagtt
atgccccctaatgatagatgcacagttaaaggaatcacattacatgatgaagcagttgat
tgggccgcggccggagatcacgttagtctcactttgaccggcgtggatatcatcaaaatc
aatgtgggctgtgtgttctgcagtcctagtgaacctatcagagcctgtacacgtttccga
gccagagttctcatctttaattttgatgttcctgtaacacaaggattcccagttattata
cactaccaaactgtgagtgagcccgccaccatcaggaggctgatcagtgtactacacaag
agcacaggagaagtggttaagaaaaagccaaaatgtctcacaaaaggaatgaatgccatg
atagagcttcagacacaaaggcctatcgctttagaattatacaaagactttaaagaactt
ggccggttcatgcttcgatacagtgggtcatctatagcagctggagttgtcacggagata
aaagaatga
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