Bufo gargarizans (Asiatic toad): 122934298
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Entry
122934298 CDS
T07965
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122934298 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122934298 (MSH2)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122934298 (MSH2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
122934298
NCBI-ProteinID:
XP_044145602
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Position
4:complement(491974979..492098387)
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AA seq
932 aa
AA seq
DB search
MAVQPKEKLSMDSGAESGFISFYYSMPEKPDTTVRVFDRNDYYTVHGGDALFAAKEVFKT
NGVIKYLGSGSKKLESVVLSKMNFESVVRDLLLVRQYRVEVYKNKSGGKSSKDSDWHLAF
KASPGNLTQFEEILFGNNDMSSAVGVVGVRLVTSEGQRLVGVGFVDSTLRKLGVCEFPDN
DQFSNLEALLVQIGPKECVMPGGDAGGDMGKIRQIIQRGGILITDRKKSEFTTKDCVQDL
NRLLKAKKGEQITSAALPEMEKQVAMSALSAVMKYLELLSDESNFGQFAMTSFDLNQYMR
LDNAAVGALNVFPGSAEDTSGTQSLAGLLNKCKTPQGQRLINQWIKQPLMDKNRIEERLN
LVEAFVTDVELRQCLQEDLLRRIPDLNRLAKKFQRQNANLQDCYRIHQAVNHLPSVIQTL
EKYEGSHQMLLLAVFVTPLTDLTSDFSKFQEMIETTMDMDQVENHEFLVKASFDPNLTEL
REKMDDLEKNMQSTLNSAARELGLDPGKSIKLESNAQLGHYFRVTCKEEKALRNNKKFTT
IDIQKNGVRFTNSKLSSFNEEYIRHREEYEEAQNAIVKEIINISSGYVDPMQTLNDVIAQ
LDAVVSFAHVSNAAPMPYVRPVILEKGQGRIVLKSARHPCIEMQDDVAFIPNDITFEKGK
QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVSIVDCILARVGAGDSQLKG
VSTFMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIQAFCMFA
THFHELTALADQEPTVNNLHVTALTTDETLTMLYRIKTGVCDQSFGIHVAELANFPKHVI
ENAKAKALELEEFQFVGSGRDSEDEPACKKRYTEKEEGEKIIQDFLSKVKTLPLTEMSEE
DLKLQLNQLKADVLAKNNRFVNEVISRAKTVS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcagccgaaagagaagctgtccatggacagcggggcagagagcggcttcatc
agcttctattactccatgccggagaagccggacaccacggtgcgggtgtttgaccggaac
gattactacacggttcacggcggagatgcgttatttgccgccaaggaagtcttcaagacc
aacggggtcatcaagtacctgggatcaggaagcaagaagctggagagcgtggtgcttagt
aagatgaactttgaatcggtggtgcgggatcttctccttgttcgtcagtatcgtgtggaa
gtttataagaacaagtctggagggaaatcctccaaggacagtgattggcatctggctttt
aaggcctcacccggaaacctgacgcagtttgaggagattctgtttggcaacaacgatatg
tcctctgctgttggagtggtcggtgtccggctggtcacttctgaagggcagagattggtt
ggtgttggttttgtagactccacgttgaggaagctcggagtgtgcgaatttccagataat
gaccagttttccaatctagaggctttactggttcaaattggacccaaagagtgtgtgatg
cctggaggagatgctggtggagacatggggaaaataagacagattattcagcgaggtggg
attctcattacagataggaagaagtcagagtttaccacaaaggattgtgtacaagatctt
aaccgtctactgaaggctaaaaaaggcgagcaaatcacgagtgcagcattaccagagatg
gagaaacaggttgccatgtcagccctgtctgcagtcatgaagtatctggagctgttatcg
gatgagtctaactttggacagtttgcgatgaccagctttgacctgaatcagtacatgaga
ttagataacgctgcagtcggcgcactgaacgtcttccccggctccgctgaggacactagt
gggacacagtcactggccggattgttaaataagtgtaaaaccccccaggggcaaaggttg
atcaaccagtggattaaacaacccctaatggacaagaacaggattgaagagaggttgaac
ctggtggaagcgttcgtgactgatgtcgaactcagacagtgtctgcaggaagatttacta
cgacgcatcccagatctcaaccgcttggccaaaaagttccagagacagaatgccaacctt
caagattgctacaggatccaccaggcggtgaaccacctgcctagtgtcatccagacctta
gagaagtacgaaggtagtcaccagatgctgctgctggccgtctttgtcactcctctcacc
gatcttacttcagacttttccaagttccaagaaatgattgagaccaccatggacatggat
caggtagaaaaccatgaatttctggtgaaagcttcttttgatcccaacttgacagaactg
agagaaaagatggacgaccttgagaagaacatgcagtctactctgaacagtgcagccaga
gagcttggtctggatcctgggaaaagcataaaactggaatccaacgcgcagctcggtcac
tatttccgggtgacgtgcaaagaggaaaaggctctgaggaacaacaagaagttcactacc
attgatattcagaagaatggagtgaggttcacaaacagtaagttgagctctttcaacgag
gagtacattagacaccgggaggagtatgaggaggcacagaatgcgattgtgaaggaaatc
attaacatctcctctggatacgtggatccgatgcagacgctaaacgatgtcattgctcag
ttggatgcggttgtcagctttgctcacgtttcgaatgcggcgccaatgccatatgttcgc
ccagtcatcttggagaaaggacagggaagaattgtgctcaaatctgccagacacccatgt
attgaaatgcaggatgatgtggcgttcatccccaatgacataacattcgagaaggggaag
cagatgttccatattatcactggccctaacatgggtgggaagtccacatatattcgccag
accggagtgattgttctcatggctcagattggctgctttgtaccatgtgactctgcagaa
gtgagcatagtggactgcattctcgcccgagttggagccggagacagtcaactaaaagga
gtgtctacgttcatggctgagatgctagaaacggcttcgatcctcagatcagccacagag
aattccctgattatcatcgatgaactagggagagggacctcaacctatgacggctttggc
ttggcatgggccatctcagagtacatctctactaaaatccaggcgttttgtatgttcgcc
actcactttcatgaactgaccgctctggctgaccaggagcctacagtgaacaatctacat
gttaccgctttaacaaccgatgaaacgctcaccatgctttaccggatcaaaacaggcgtt
tgtgaccagagttttggaattcacgtagcggagcttgctaacttcccaaagcatgtgata
gaaaacgctaaagcaaaagccttggagctagaagaatttcagtttgttggaagcggcagg
gacagcgaggatgagccagcctgtaagaagcgctacacagaaaaagaggaaggtgagaag
atcatccaggactttctttccaaagtaaaaactctgccacttacagaaatgtctgaggaa
gacctgaaactccaactgaaccagctgaaggcggatgttctggccaagaataaccgtttt
gtaaatgaagttatttcccgggcaaagacagtgtcctga
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