Bufo gargarizans (Asiatic toad): 122934457
Help
Entry
122934457 CDS
T07965
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgar03021
]
122934457 (SCAF8)
03041 Spliceosome [BR:
bgar03041
]
122934457 (SCAF8)
Transcription machinery [BR:
bgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122934457 (SCAF8)
Spliceosome [BR:
bgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122934457 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122934457
NCBI-ProteinID:
XP_044145868
LinkDB
All DBs
Position
4:441266570..441475552
Genome browser
AA seq
1328 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKSAIKAIKFYKHVVQGVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDLFAPRFSNNIINTFQNLYRCPTDDKSKIVRVLNLWQKN
NVFRSEIIQPLLDMAAGIPPPVVTPVFPSTAAAVSNTPGTPATPVTPANVVQGIPDPWIA
QITNTDTIAAVAQILQSPQGQQLQQLVQSLHVQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAAASNTLNPLEQSVSLSKKLIDRFDFGEENSQNEDSKKDGSQIPLVPDSVNNSLFHQ
LAEHLQQQNLEHLRHQFLEQQQQQQHTPKMTAQENQDMMSESENSATPSQDDSQQAFMEK
EAQLHTSLSLQQEDMDIEEMQDVTEEMFEKEEKKMIKDEKPRVRSKSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKTSRSYSSERRAREREKERMKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNVFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSCKI
GSKIIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGMIDQETVNSEW
QAQRIPEPVVVKEPVPVPTTTVQSPIVPKTSIITTQPEAYNPPVAMLQIPVTPTVPAVSL
VPPAFPVSMAVPPPGYTALPPPPFMRASFNPSQPPPGYMPPPVPPPTIPPPSMGSAIPTA
LVPRLPMSTDSIKEVSYGGLMLPMPSVVTTSVSTPSVFNTSLSTQADQEEKRVPPTESAN
ERTAATSTQSTVVSSTGILGVQPQHITASVAPLTMGGRIAAMPFLDIRPGLLHQPATARF
GLLTPAMPPPPPPRSMLPPGLIDPTLHSLQFTQGEIFPRPTIPPRLNNDNALPQEEGISL
QSSTIRQERDQDYRFPPIESRETVGHSSGGEQKKEGMQLVASRENEGVSSAEDIDINIRH
IEDDHEPQDMAVVDPSESQEKIVTGPILGQLSAEGAHKDEREDEMHSLESLRGPDHHSFE
NKLKNIPDDHEVPIRPQLDPRQHFGSPPADLLLPFGRHPLEIRETFGRPPLEGRDHYGRP
PPEGRDHLGRPPVDGRDHYGRPILEGRNSFGRLPVDGREIFGRPPLDMRDHFGRPPPDIG
RREHFPPDKPWGHRGDFDERPHPSFTGFGGQKGFPDDRPSRHGNYRHEQRNAPGWNRGFE
SDDHRDYDDRRRSWERHRDRDDRDFGFRREVNGNRFGRERQTSNWMPPQQQYFEYFPEAT
TTKEKADEVSQVNGEKPETESQQQTLKNANEPELCEKETPDKKNEERGAVEAEVKSQPVV
ESTETEGT
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtcaaaacctttaacagcgagttatactcgctcaatgactacaagcctcca
atttccaaggccaaaatgacacagattacaaagtctgcaattaaagccataaagttctac
aagcatgttgttcagggcgttgagaaatttatccaaaagtgtaaacccgaatacaaagta
cccggactctatgttattgactccattgttcggcagtccagacatcagtttggacaagag
aaggatctttttgctcctcggtttagcaataacataataaacacttttcagaatttgtat
cgctgcccaacagatgacaagagcaaaattgtaagagtactgaacctgtggcagaagaat
aacgtgttcaggagtgaaattattcagccgcttttggatatggctgctggcattcctccc
cctgttgtcactcctgtctttcccagtactgcagcagctgttagcaacacaccaggcacc
ccagcaacccctgttaccccagcaaatgtagttcaaggcatacctgatccatggattgct
cagataaccaatacagatacaattgcagcagtggcacagattttacaaagcccccaggga
cagcagcttcagcagttggtccagtcgttgcatgtccagcaacagaagccacaaccctca
cttctacaagctctagatgctggcttagtggttcagttgcaagcccttacagcacagcta
acagcggcagctgctgcctcgaacacactcaacccgctagagcaaagtgtatctctcagt
aagaagctgatagaccggtttgattttggggaggagaattcacagaatgaggactcaaaa
aaggatggttcacaaattccgcttgtaccagattctgtgaacaactcacttttccatcag
cttgcagaacatttacagcagcaaaatctagaacatctacgccaccaattcttggagcag
cagcagcagcagcagcatactccaaagatgacagctcaggagaaccaggatatgatgtct
gaatcagaaaattctgctaccccatcgcaggatgacagccagcaagcctttatggagaaa
gaggcacagcttcatacttcgctatcattacagcaagaggatatggatattgaagaaatg
caagatgtaacagaagagatgtttgaaaaggaagagaagaaaatgataaaagatgaaaaa
ccaagggttcgttccaaatcacgatctagatcacccagaaaaaggcgttctagatcccgt
tcaggatccaggaagcgcaagcatcgaaaacgttctcgttcaaggtcaagggaaagaaaa
cgtaagacttcaaggtcatactcaagtgagagaagagcacgagagcgagaaaaagaacga
atgaaaaaaggactgcctccgattcgatccaaaactctaagtgtatgcagtacaacttta
tgggtgggacaggttgataaaaaggcgactcaacaagacctgaccaatgtttttgaagag
tttggacaaattgaatctatcaatatgattcctccccgtggttgtgcatatgtctgcatg
gttcacaggcaagacgcataccgggctcttcagaagctgagttcgggctcttgtaagatc
ggatctaaaattattaagatcgcttgggcgttgaataaaggtgtgaaaactgagtacaag
cagttctgggatgtggatcttggcgtcacatacataccatgggagaaagtaaagctggat
gatttagatgactttgcagaaggaggaatgattgatcaggagactgttaatagtgaatgg
caagcacagaggatcccagagcctgttgtagtgaaggagcctgtccccgtccctactact
acagtgcagagtccaattgttccaaaaacctccataataacaacacagccagaggcatat
aacccacctgtggcaatgcttcagattcctgtgacaccaactgtccctgctgtaagcttg
gtaccgcctgccttccccgtctccatggctgtcccaccaccaggctacactgcacttccc
cctcctccttttatgcgtgcaagttttaaccctagtcagccacctccaggctatatgcct
ccacctgtaccaccacccactattcccccaccttctatgggctcagctattcctacagcc
ttggttcctcgactgcccatgtctacagacagcattaaagaagtgtcgtatggtgggttg
atgctgcctatgccatcagttgtaaccacttcagtatcgacaccatctgtctttaatact
tccttaagtacgcaagcagaccaggaagaaaaaagagtacctccaacagagagtgccaat
gaaagaactgctgcaacttcaacacaaagtacagttgttagcagtactgggatcttaggc
gtgcagccacaacatattacggcatctgttgctcctttaactatgggtggaagaatagca
gccatgccttttttggatattcgtcctgggttacttcaccaaccagcaacagcaagattt
ggtttattaactccagcgatgcccccaccgccaccaccaaggagcatgcttcctccagga
cttattgatcctactctacattctcttcagttcacacaaggagagatttttccccgtccc
actattccccctagactaaataatgataatgctctgcctcaagaagaaggaatctccctg
caaagcagcaccattcgccaagaaagagatcaggactaccgcttccctcccatagagagt
cgtgagactgtgggtcactcttcaggaggtgaacagaaaaaagagggcatgcagttagtt
gctagccgggaaaatgaaggtgtgagctctgcagaggacattgatattaatattagacat
atagaggatgaccatgaaccacaggacatggcggttgttgatccaagtgagagtcaggag
aaaattgttacaggacctattttaggacagttgtctgcagaaggtgcacataaagacgaa
agggaagatgaaatgcattctcttgaaagtctaagaggtcctgatcatcattcttttgaa
aacaagctaaaaaatattcctgatgatcatgaagtaccaataagaccacagttagatccc
agacaacattttggcagccccccagcagatttattactaccctttgggagacatcctctt
gagattagagaaacatttggcagaccaccactagagggtagagatcattatgggagacca
cccccagagggtagggatcaccttggcagacctcctgtggatggtagagatcactatgga
cgcccaattttagagggtaggaactcctttggacgtttaccagtggatggtagagagatt
tttggaaggccaccattagatatgcgggatcattttggaaggcctccaccagatattggt
agaagggagcatttccccccagataaaccatggggccatagaggcgattttgacgaaaga
ccacacccgtctttcactggttttggtggccaaaagggctttcctgatgacagaccttct
cgtcatggaaattatcggcatgagcagaggaatgcgccaggttggaacagaggatttgaa
tctgatgatcacagggattatgatgaccgccgtcgttcttgggaaagacatagggatagg
gatgatcgagattttggtttccgcagagaagttaatggcaaccgatttggaagagagaga
caaacaagcaactggatgccacctcagcagcaatattttgaatatttcccagaggctact
accacgaaggaaaaagctgatgaggtgtctcaggttaatggtgaaaagccagagactgag
agtcaacaacaaactcttaaaaatgctaatgaacctgaactgtgtgaaaaggaaacccct
gacaaaaagaatgaagagagaggtgccgtggaggctgaagtaaagagtcaaccagttgtt
gaaagcacagaaactgaggggacataa
DBGET
integrated database retrieval system
