Bufo gargarizans (Asiatic toad): 122934937
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Entry
122934937 CDS
T07965
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04140
Autophagy - animal
bgar04148
Efferocytosis
bgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122934937 (VPS11)
04148 Efferocytosis
122934937 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122934937 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bgar04131
]
122934937 (VPS11)
Membrane trafficking [BR:
bgar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122934937 (VPS11)
Hops complex
122934937 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
TPR_Vps41
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3H2C3
TPR_11
zf-ANAPC11
Beta-prop_EML_2
zf-RING_11
DLP_helical
TSGP1
zf-C3HC4_3
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
122934937
NCBI-ProteinID:
XP_044146549
LinkDB
All DBs
Position
4:479878529..479907713
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AA seq
904 aa
AA seq
DB search
MAAYLQWRRFVFFEKEPVRLTGEGGEPLTLPPGLSVCDSSRGSLLFGDMTGQIWFLPRSL
QLTSFQAYKLRVTHLHQLKQHNILVSVGEDEEGVNPVVKVWNLEKRDGGNPLCTRIFPAI
PGNKPTVVSCITVHENLNFMAIGFADGSVILTKGDITRDRHSKTQILQEGSYPVTGMAFR
QTGKTTHLFVVTTESVRAYELSQKDYPYTELDSHGCGLRCSALSDPSQDMQFVVAGNECV
YLYQPDERGPCFAFEGQKLIVHWYRGYLVIVSRESHAPDRQTLTIYDLGNKFIAYSCVLN
DVVDVLAEWGSLYVLTRDGLLHGLHERDTQTKLEMLFKKNLYVMAISLAKGQHLDSDGLS
EIFRQYGDHLYSKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQALHLQSL
ANADHTTLLLNCYTKLKDSARLEEFIKASEGEVHFDVEIAIKVLRQAGYHSHALYLAEKH
AHHEWYLKIQLEDIKNFQEALRYIGRLPFPQAESNMKCYGKILMSHVPNETTQLLNDLCT
DFPNPGGGNRANPEEFIPIFANNPCELKTFLEHMTRVQSDSPQGVYDTLLELRLQNWAHE
NDPRAKQQLQNDAMTLLKSGRFKNVFDKALVLCQMHNFQKGVLYLYEQGKLFQQIMHYHM
QNDQYQEVIEACKQYGEQESCLWEQALSYFARKEEDCKEHIATVLRHIESKNLMPPLLVV
QTLAHNSTATLSVIRDYLINKMQKLSQQSEEDERTVSQYREDTARIRQEIHELRNSPKIF
QKTKCSICSSALELPSVHFLCGHSFHQHCFESYAESDSDCPTCLPENRQVLDMIRAQEEK
KDLYDHFQHQLKYSHDGFSVVAEYFGRGVFNKLTLITDAPAGRIAGVKEAGLQRDLLINT
RRNM
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtatctgcagtggaggcgattcgttttctttgagaaggagccggtgcggctt
accggggagggcggggaacctctcaccctgccgcccgggctgagcgtctgcgactccagc
cgcggtagcctgctgtttggggatatgaccggccagatttggttcctgccccgttccctc
cagctcacctctttccaggcttataaactccgcgtcacccacctgcatcagctaaagcaa
cacaacatcctggtctctgtcggcgaggatgaggagggggtgaatcctgtggtcaaggtt
tggaacctggagaaacgggatggaggaaaccccctttgcacaagaatctttcctgcaatt
cctggtaataagccgacggttgtttcgtgcatcacagttcatgaaaatctcaactttatg
gccatcggttttgccgatggaagtgttatcttaaccaagggggatataactcgagacaga
catagcaagacgcagattctgcaagaggggagttatccggtcacaggcatggctttcaga
cagaccggcaagaccacccatctctttgtggtcacaactgagagtgtcagggcctatgag
ttaagccagaaggattacccatacaccgagttggactctcacggctgtggcctgcgttgc
tctgcgttgtctgatccctctcaagacatgcaattcgtagtggccggtaatgaatgcgta
tacctttaccagccggacgagaggggaccctgctttgcctttgaaggacaaaagcttata
gtacattggtatcgcggttatctagtcattgtatcaagagaaagccatgcaccggacagg
cagacgctgaccatatatgacctgggaaacaagttcattgcttatagctgtgttctgaat
gacgtggtggatgtactggcagagtggggctctctctatgttcttacacgggatggactc
ctgcatggcttacatgagagagacacgcaaaccaagctggagatgcttttcaagaagaat
ctttatgttatggctatctctttggccaagggccagcacctggacagtgatggactgtct
gagatcttccgccagtatggagaccacctgtacagcaaaggagaccacgacggagctatc
cagcaatatatacgaacaattgggaagttggagccgtcttacgtcatccgcaaatttcta
gatgcccagcgcatacacaatttgacagcgtacctacaggcattacatttgcaatctcta
gccaatgccgatcacaccactcttctactgaattgctatactaagctaaaggacagtgcc
cgtctagaagaatttatcaaggccagtgagggtgaagtacatttcgatgtggaaatagca
atcaaagttcttcggcaagctggctaccattcacatgcgctctacttggcagaaaaacat
gcccatcatgaatggtacttgaagatccaactggaagacattaagaacttccaagaagct
ctgcgatacattggacgcctgccctttcctcaagctgagagcaatatgaaatgttacggg
aaaatactcatgtcccatgtgcccaacgagacaacccagctgctgaatgacctttgcact
gacttccccaatcctggcggagggaacagggcaaatcctgaagaattcattccaatattt
gctaacaatccctgtgagctgaagacctttctggagcatatgacaagagtgcagagcgat
tctcctcaaggagtttatgacactttacttgagctacgtttgcagaactgggcgcatgag
aacgaccctcgggcaaagcagcagctgcagaacgacgccatgaccctcctgaagagcgga
cgcttcaagaacgtgtttgataaagccctagtcctgtgccagatgcataattttcagaaa
ggagtgctgtatctgtatgagcaaggcaaactcttccaacagattatgcattaccacatg
cagaatgaccagtaccaggaggtcatcgaagcctgtaagcagtatggggagcaagagagc
tgtttgtgggagcaggcacttagttactttgcacgcaaggaggaagactgcaaggagcac
attgcaacagtattgaggcatattgaaagcaaaaacctcatgcctccactgttggtggtg
cagaccttggcacataactccaccgccaccctgtctgtgatcagagattatctgatcaac
aagatgcagaagctgagccagcagtcagaggaagatgaaaggactgtcagtcagtaccgg
gaagacactgctcgcatccgccaggagatccatgaattacggaacagccctaagatcttc
cagaagacaaagtgcagcatctgtagcagtgctctggagctgccatctgtacatttcttg
tgtggccattctttccaccaacactgctttgagagttatgcagagagcgactcggactgc
cccacctgcctgccagagaaccgacaggtgcttgatatgatcagggctcaggaagagaag
aaggatctgtatgaccacttccagcaccagttaaagtactctcacgatggattcagcgtg
gtggcagaatactttggccgtggtgtattcaacaaattgacgttgatcacagatgcccct
gcagggaggatagctggggtgaaagaggcaggactgcagcgggatcttcttatcaacacc
aggagaaacatgtga
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