Bufo gargarizans (Asiatic toad): 122934967
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Entry
122934967 CDS
T07965
Symbol
WDR43
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122934967 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgar03009
]
122934967 (WDR43)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122934967 (WDR43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_IFT122_1st
WD40_like
DUF2415
Paf1
WD40_MABP1-WDR62_1st
UTP15_C
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
122934967
NCBI-ProteinID:
XP_044146587
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Position
4:complement(527187741..527208382)
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AA seq
658 aa
AA seq
DB search
MAAAGGVYEPLPPPCAFSPRSRDLLALSGVDGRIQVWDTRGAGLRREYVPSAHLSATCTC
LAWAPARGIQEAHQKKRRKSEAVDKDEQYDLLTIGTATGTILLYSIVKGELQSKLVGGHD
RKVTCIRWHQDNGFLYSCSEDKHIVEWNTQTFKVKCKWKGDNSSVSSLCISPDGKMLLSA
GRTIKLWDLETKEVTRQFTGHSSAVTSLMFIPVRAPADAQTAPDTSGLYFLSGSVHDRLI
SVWQVRTEKKEKSAVLSFTLTESPVSVDLVPSDSKEEPLKLAVVCRDGQLHLFEHILNGT
HKKPVVPTCTVQIAMSGSDEASTPKPLPIQSAGFCPDKQTVVLYYGSTMQPAIERVVLKT
DEPHLCLIRDVQKTLTLRKEMAVTKVKTPIVKAADTKVLVPGIPGHSSAVAAVSSKSERR
DWKRKPGDKEVSIEDRLGAMDIDLPKVPTKSGLPQTDNFSVLLVQGLESNDFNILNKVFQ
TKNESQIKKTVARIPVYSVIPLVHELTKRLQGHPNSAVLMVRWIKAVLVHHASYLSTLPD
LVPQLGSLYQLMETRVKTLQKMSRLNGKLYLLITQLAASEISQRIKTNQEAKMVYEEESS
EDESGGEEHNTDSDDNWEEGEEEEEEGGSGNEGSEEEMNVDKVNGDSDVDPGNESEEE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgggcggcgtgtacgagccgctcccccctccctgcgccttctcgccgagg
agccgggacttgctcgctctctccggggtagacgggcggatacaggtgtgggacacccgc
ggggccggcctgaggagagagtacgtgccctccgcgcacctcagcgcgacctgtacgtgt
ctggcctgggctccggcccgggggatccaggaagcgcaccagaaaaaacgtaggaaatcc
gaagcggtagataaagatgaacagtacgacctcctcaccatcggcacagccaccggcacc
atattgttgtacagtatcgtcaaaggggaattacagagcaaattggttggcggccatgac
aggaaagtgacctgcatccggtggcatcaagacaatggtttcttgtacagttgttcagag
gacaaacacattgtggaatggaacacacagaccttcaaagtaaaatgcaaatggaaaggc
gacaacagcagcgtcagcagcctgtgtataagtccggacgggaaaatgttgctgtctgcg
gggcggacgatcaaactgtgggatctggaaaccaaagaagtcaccaggcaattcacaggt
cattcctcagcggtcacctcactcatgttcatcccagtccgagcaccagcggacgcccag
actgcacccgacaccagcggcctctacttcctgtccgggtctgttcacgaccggttaata
agcgtgtggcaggtccggaccgaaaaaaaagagaagagtgcagtcctgtcattcacactc
acagaatcgcccgtctctgtagacctggtaccatctgacagcaaagaggagcctctgaag
ctggccgtcgtctgcagggatggacagttgcacttatttgaacatatattgaatgggacc
cacaagaagcccgtcgttcccacatgtacagtacagatagcaatgtcaggcagcgatgag
gcctccacgccaaagccgctgcccatccagagtgccggcttctgcccggacaagcagact
gtggtgctgtattatggcagcaccatgcagccagctattgagagagtggtgctgaagacg
gacgagcctcatttatgtttaatcagagacgtccagaagacgctgacgctccggaaagag
atggcagtgaccaaggtaaaaactccgattgtcaaggctgccgacaccaaggttctggtc
cctggaattccgggtcacagctcagcagtggcggccgtgtcctccaaatcagagaggcgg
gattggaagcggaaacccggagacaaggaggtcagcattgaggacagacttggtgccatg
gacatcgaccttcctaaagtgcccaccaagagtggcctgccccagacggacaacttctcg
gtgctcctcgtacaaggcctggagagcaatgacttcaacatcttaaataaagtattccag
accaagaacgagtctcagatcaagaagactgtggcgaggataccagtgtactcggtcata
ccgctggtgcatgagttgacgaaacgattacaaggacatcccaacagtgccgtattgatg
gtgcgctggatcaaggcggtcctggtgcaccacgcgtcctatctgtccactttaccggat
ttggtgcctcagttgggttccctctatcagctcatggagacccgggtgaagaccctccag
aagatgtcacgtctgaatggaaagctttacctcctcatcacacagttggcagcatctgag
atctcacagaggataaaaaccaatcaagaggccaaaatggtgtacgaagaagaatcctca
gaagacgagagcgggggcgaggaacacaacactgactccgatgataactgggaagaagga
gaggaggaggaggaagaaggaggatccggcaatgagggttcagaggaagagatgaatgta
gacaaagtgaacggtgattcagacgttgaccctggaaatgaaagtgaagaagaataa
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