KEGG   Bufo gargarizans (Asiatic toad): 122935061
Entry
122935061         CDS       T07965                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar03030  DNA replication
bgar03410  Base excision repair
bgar03420  Nucleotide excision repair
bgar03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122935061 (RFC5)
   03410 Base excision repair
    122935061 (RFC5)
   03420 Nucleotide excision repair
    122935061 (RFC5)
   03430 Mismatch repair
    122935061 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bgar03032]
    122935061 (RFC5)
   03036 Chromosome and associated proteins [BR:bgar03036]
    122935061 (RFC5)
   03400 DNA repair and recombination proteins [BR:bgar03400]
    122935061 (RFC5)
DNA replication proteins [BR:bgar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122935061 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    122935061 (RFC5)
Chromosome and associated proteins [BR:bgar03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122935061 (RFC5)
DNA repair and recombination proteins [BR:bgar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122935061 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    122935061 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_11 AAA_22 RuvB_N AAA_assoc_2 AAA_24 AAA_14 ResIII DEAD AAA_16 DUF815 PhoH AAA_30 AAA_7 AAA_5 AAA_19 DNAX_ATPase_lid TIP49 ATPase_2 AAA_2 Mg_chelatase bpMoxR Thioredoxin_6
Other DBs
NCBI-GeneID: 122935061
NCBI-ProteinID: XP_044146722
LinkDB
Position
1:586698710..586757406
AA seq 335 aa
MVSDEKARAGQSRNLPWVEKYRPQTLDDLISHQDILSTIQTFISEDKLPHLLFYGPPGTG
KTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILD
EADAMTQDAQNALRRVIEKFTENTRFCMICNYLSKIIPALQSRCTRFRFGPLSSEMMVPR
LEHVVQQENVDITPDGMKALVTLSSGDMRRALNILQSTNMAYGKVTEDTVYTCTGHPLRA
DIANILDWMLNKDFTTAYKQIMELKTLKGLALHDILTEVHVYVHRVDFPPSVRMHLLTKM
ADIEYRLASGTSEKIQLSSLIAAFQVTRDMIAAEA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggtatccgacgagaaagctcgggccggacaaagcagaaacctgccatgggtggaaaag
tatcgaccacaaacactggatgatttgatctcccatcaggatattcttagtacaattcaa
acgttcataagtgaagacaaactgcctcaccttttattctatggacctcctgggactggc
aaaacttccacaatcctagcttgtgcaaagcagctttataaagataaggagttcaattct
atggtactagagttaaatgcatctgatgatcgtggcatagatattgtcagaggccccatt
ttaagttttgccagcacaagaacaatatttaaaaagggttttaagcttgtgatcttggat
gaagcagatgcaatgactcaagatgcacagaatgctttgagacgagtgattgagaagttc
acagaaaacacgagattttgcatgatttgcaattacttgtcaaagatcatcccagcttta
cagtcccgatgcacaaggtttcgctttggtcccctcagctcagaaatgatggtgcccagg
ctggaacatgtagttcaacaggagaatgtggatattactccagatggaatgaaggctttg
gtcaccctgtctagtggcgatatgcgtagagctctaaatatattgcagagtacaaacatg
gcttatggaaaagtgactgaggatacagtatatacctgcactggtcatccactgagagca
gacattgctaacattctggattggatgctaaacaaggatttcaccacagcatataaacaa
atcatggaactgaagaccctcaaaggcctggctcttcacgacattctcactgaagtacat
gtctatgtacacagagtggattttccaccatctgttcgaatgcatttgctaacaaagatg
gctgatatagagtacagactggcttctgggaccagcgagaagattcagctcagttccctt
atagccgcattccaggtcactcgagacatgattgctgcggaagcttag

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