KEGG   Bufo gargarizans (Asiatic toad): 122935352
Entry
122935352         CDS       T07965                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar04510  Focal adhesion
bgar04512  ECM-receptor interaction
bgar04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122935352
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122935352
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122935352
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:bgar00535]
    122935352
Proteoglycans [BR:bgar00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   122935352
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 122935352
NCBI-ProteinID: XP_044147052
LinkDB
Position
4:complement(241474264..241589935)
AA seq 719 aa
MSVRRFYTGVTELGNYVTYLTDDIIEFDLQWMLIHCDPLRPERESCTELEAKRAVTQVMI
QRGPPGPPGPEGPPGPPGVPGIDGIDGDRGPDGPPGPPGADGDSGKPGSPGLPGEPGADG
LTGPEGNAGPPGSRGQKGEPGLPGSRGLSGGGVSGPRGSPGPSGLPGELGRSGPVGDAGG
RGLPGPPGPPGPPGTVALPEGDPLCPNSCPPGRPGYPGLAGMKGHKGVKGEAGEPGKQGH
KGEEGEQGEIGEIGSQGPPGPQGLRGITGIIGLKGSKGARAVDGEPGPRGVAGAAGDQGQ
RGSLGEAGPKGDRGTVGPRGITGMPGSKGESGLPGVDGRDGIPGMPGSKGDSAEPGAPGE
AGLQGLPGLPGNQGAKGVAGEKGNSGAPGVAGLMGKSGKPGDQGPQGEVGPRGPVGPSGD
RGEAGPVGPPGAPGKQGPRGDPGFLGLPGPPGLPGLKGDRGGVGETGPKGEQGGAGEEGF
GGEKGEQGEIGNPGPKGTTGSPGEPGNRGPEGGRGLPGVEGPQGSSGPRGMQGEHGAPGL
PGSQGPAGREPTDQHIKQVCMRVLQEQLANLAASLRRPESGAAGLPGRPGAPGPPGSPGD
NGVPGHVGARGLPGLKGPPGEIGLKGPKGDAGERGERGLPGRGPKGLPGMQGLTGEPGKP
SYGRDGRDGERGPPGPAGQPGIPGPPGPAGHAGYCDPSSCSLQAIAAPQSAKDSNMKGP
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgtctgttagaagattttacactggggtcactgagttaggaaattatgtcacctattta
acagatgacatcattgaatttgacctccagtggatgttaattcattgtgatcctctgaga
cctgagagagagtcctgcacagagctagaggccaagagagcggtcacccaggtcatgatc
cagagagggcccccgggaccccctggaccagaaggtcctcccggaccacccggtgttcct
ggcatagatggcattgatggagacaggggtccagatggtcctccaggccctccaggtgca
gatggggattcaggcaaaccaggatctcccgggttaccaggcgagccaggagccgatggg
ctgactggacctgaaggaaatgctgggcctcctggatcaagaggtcaaaagggtgagcct
ggattgccaggttcgcgcggtttgtcgggcggaggagtttcagggccacggggatcacct
ggtccctctgggcttccaggagaattgggtcggtcgggtccagtgggtgatgctggtgga
cgaggacttccaggaccaccagggccaccgggaccaccagggacagttgctctgcccgaa
ggagatcccctgtgccctaattcatgcccaccaggccgtccaggatatccaggtttggct
ggaatgaagggccacaaaggtgtcaagggagaagctggcgaaccaggaaaacaaggtcat
aagggagaagaaggtgaacaaggagaaattggtgaaattggttcccaaggacctccagga
ccacaaggcttaagaggaattactggcataatcggactaaaaggaagcaagggtgctcgt
gcagttgacggagagcctggtcctcgaggggttgctggagctgctggtgaccaaggtcag
agaggctcactaggagaagctggaccaaaaggcgataggggaactgttggacccagagga
atcactggaatgccaggctcaaagggagaatcgggattgccaggcgttgatggccgtgat
ggaatccctggaatgccaggatcaaagggtgactctgcagaacctggagccccaggagaa
gcaggtcttcaaggattgccaggtttgccaggcaatcagggagcaaaaggagtagctgga
gagaagggaaacagtggtgccccaggtgtagctggattaatgggaaaatctggtaaacct
ggtgatcaaggacctcaaggggaagttggcccaagaggacctgttggaccttcaggtgac
agaggagaagcaggtcccgtaggcccacccggagcacctggaaaacaaggtccacgaggt
gatcctggctttttaggtctgcctggtccccctggtcttccaggacttaaaggtgacagg
ggtggtgtcggggagactggacctaaaggagagcagggtggtgccggagaagagggattt
ggcggagaaaaaggtgaacagggtgaaattggaaatccaggccccaagggaacgactgga
agccccggagagcccggtaatcgtggcccagaaggaggtcgtggtctgccaggtgtagaa
ggtcctcaaggttcttctggtcctcgtggtatgcaaggtgaacatggtgcacctggttta
ccaggaagtcagggcccagcaggtagagaaccaacagatcagcacattaagcaagtctgc
atgagagttttgcaagaacagttagcaaacttggcggctagtctacgaaggccagaatct
ggagcagctggtttaccaggacgaccgggtgcaccaggaccacctggatcaccaggagat
aatggtgttcctggacatgttggagcaagaggacttcctgggttgaaagggcctcctgga
gaaattggtcttaaaggtccaaaaggtgatgctggtgaaagaggagagagaggactacca
ggcagaggtccaaaaggattgccaggaatgcaaggacttacaggtgaaccaggaaagcca
agttatggacgagatggtcgtgatggagagagagggccacctggccctgctgggcaacct
ggaattccaggaccaccaggtcctgctggccatgctggatactgtgatccttcctcttgc
agccttcaggccattgctgctccccagtctgctaaagattccaacatgaaagggccttga

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