KEGG   Bufo gargarizans (Asiatic toad): 122936372
Entry
122936372         CDS       T07965                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122936372 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgar03019]
    122936372 (WDR33)
Messenger RNA biogenesis [BR:bgar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     122936372 (WDR33)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_IFT140_1st EIF3I Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR75_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_WDR11_2nd Beta-prop_WDR41 PEP5_VPS11_N Ge1_WD40
Other DBs
NCBI-GeneID: 122936372
NCBI-ProteinID: XP_044148481
LinkDB
Position
4:complement(111881807..111971100)
AA seq 1499 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDYAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPLNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLLVSGSKDSQQPIKFWDPKNGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLREELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWN
VGVEKEVGGMEIAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDVEPNNLAVIPGMGIPEQLKMAMEQEQMGKEEANSVEMTIPGLDWGMDE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWLQNKVPLMPTSEAVPERKEEVKSDEKKKNQAE
IEQEMATLQYTNPQLLEQLKIERIAQKQAEAPGQSQGLASPLGAPPQVPSAFPASGPQSQ
PPQNFQQPHPSQPMAMNMQHGPQGQFRPQGPQVSGGPQGFMGPGPQNMRPQEMHPGMPRL
PVPVGPMGPQGPPGNSGPPGHLAPQIPQGPRGGPPPHHGMQGGPGPQGPLMGVAPRGVQQ
GPNQGMLMGHPAQDLRGPSAPILGHGPDVRGPMDMRGPSDIRGPQDMRGPPELHGPQDMR
GLPDMRGPQDMRGAPDMRGPLDLHGSQEIRAPDLRGPQDMRGLSDMHGSVDMRGPPDMRG
PHDMRGPPDMRGPHDMRGPQDMRGPPDMRGPPDMRGPQDIRGPPDMRGPQDMRGPPDMRG
PPDMRGLQDMRGPPDMRGPPDMRGGPDMRGPPDMRGGPDMRGPPDMRGGPDMRGLPEMRG
GPDMRGPPEMRGGPHDMRGPHDMRGPPDVRGQQDMRRSDVRGPLDMRGQQHMRGTQDTRG
PSDMHISPDIRSPQDIRGSQDMRNLQDVRGPPDMSGPHEMRGPQNRGSNLGLSQDTRGQS
VAQGPTGNSQGPHNSQTAARASHQSQQKTPLLGDGPRPFNQGGKGQAPPPLLPGLGGQPN
AQGRPPALGQGPNPNKGDMRGPSNHQSERRREPSPFRGGPEWMDSRDSRGPPDRRGPHSE
GLEHPDDYNQDDRYGPRGRDFDARSGSAPLQDEKWRRGTGPQFTPNHRDFPDREARDSNR
WEGRRHSDDQFARDSEDGRFRGQRDDSFRRSGPSRHEGRGSRGREGFSNSDDFGSSDSYE
KDEHGRGRESSRGRGRGPQREARKGLLPTPDQFSGSDRGPNHQSRDPSRDSGPDHFQGSP
QRDIPTPESHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTPDHRDMDAGLSDDSGKGP
PNRSQRLSRSSSQEQDEGSSRGTRGNWGRGGSGTSSNMNSQWRGGPRGSGSSSGGGRNR
NT seq 4500 nt   +upstreamnt  +downstreamnt
atggcaacagaaattggttccccgcctcgcttcttccacatgccacgctttcagcaccag
gctcctcgccagctcttctacaaacgccctgactatgcacagcagcaggccatgcaacaa
ctcaccttcgatggcaagcgcatgaggaaggctgtgaatcgcaagactatagattacaat
ccctctgtcataaagtatcttgagaatcgtgtatggcagagagatcagcgagacatgaga
gccatccagcctgatgccggatattacaatgatttggtgcctcccattgggatgcttaac
aatcctctcaatgctgtgactacaaagtttgtgcgtacatctaccaacaaagtaaagtgc
cctgtatttgttgttcggtggactcctgaaggccgccgattagtaactggagcttcaagt
ggggaattcactttatggaatggtctcacatttaattttgaaactattttacaggctcat
gacagcccagtccgagctatgacctggtcccataatgacatgtggatgctgactgctgat
catagtggatatgtgaagtactggcaatccaacatgaataacgtcaagatgttccaggcg
cataaggaggcgattagagaggccagtttctcccctactgataataaatttgccacctgt
tctgatgacggtacagttagaatttgggactttcttcgttgccatgaagagagaattcta
cgaggacatggtgctgatgttaagtgtgttgattggcacccaacgaaagggcttctggtt
tctggaagtaaagacagtcaacagccaatcaaattttgggatcccaaaaatggtcagagt
cttgcaacactacacgctcataagaatacagtgatggaggtgaagtggaacttgaatgga
aactggctcctcactgcctcacgggatcatctctgtaagctttttgacatccgtaatctt
cgagaagagcttcaggttttcagaggacataaaaaagaggcaacagctgttgcatggcat
ccggtacatgagggcttgtttgctagtggtggttctgatggctcgctgctgttctggaat
gttggtgtggagaaagaagtgggaggtatggagattgcacatgaaggaatgatctggagt
cttgcctggcacccccttggccatattctgtgttctggatctaatgatcacaccagtaaa
ttctggaccagaaatcgtcctggggacaaaatgagagatcgctataatctgaatcttctt
cctggcatgtcagaagatggtgttgaatatgatgatgttgagccaaacaatctagcagtt
atccctggcatgggcattccagagcagctgaaaatggcaatggaacaagaacagatgggg
aaagaagaggctaattcagtggaaatgacaatcccgggcttggactggggaatggatgag
gtgatgcagaaggatcagaaaaaagtcccacagaagaaagttccatatgctaaacctatt
ccagctcagttccaacaagcctggctgcagaataaagtgccccttatgcccacttcagaa
gctgtcccagaacggaaggaagaagtaaaatctgatgagaagaaaaagaatcaggctgaa
attgaacaggagatggcaactctacagtatactaacccccaactacttgagcaattaaag
attgaaaggatagcacagaagcaagccgaagctccagggcaatcccagggccttgcttcc
cctttaggggcacctccacaagttccttcagcatttcctgcctcaggaccacaatcccag
ccaccacaaaatttccagcagcctcatccatcacaaccaatggcaatgaacatgcagcat
ggccctcaaggacagttcaggccacaaggacctcaagtatctggaggtccacaaggtttc
atgggtccaggtccacaaaacatgcgacctcaggaaatgcatcctggaatgcctagactt
ccggtgcctgttggacctatgggtccacaaggtcctccaggtaattctgggccacctggt
catttggctcctcagattccacaaggtccaagaggaggtccgcctcctcatcacgggatg
caaggaggtcctggtcctcagggtcctttaatgggtgttgctcctagaggtgtccaacaa
ggtcctaatcaaggaatgcttatgggccatccagcacaagatttgagaggtccttcagcg
ccaatacttggacatggacctgatgttagaggaccaatggatatgagaggaccctcagat
attcgtgggccccaggatatgaggggaccccctgaacttcatggacctcaagatatgaga
ggccttcctgacatgcgaggccctcaagacatgaggggtgctccagatatgcgaggtcct
ctagacttacacggctctcaggagatcagggctccagacttgcgtggacctcaggatatg
agaggactttctgatatgcatggctctgtagatatgcgaggacccccagatatgcgaggt
cctcatgatatgcgaggacccccagatatgcgtggacctcatgacatgcgtggcccccaa
gatatgcgcggacctccagacatgcgcggacctccagacatgcgtggcccccaagatata
cgcggacctccagacatgcgtggcccacaggatatgcgcggtcctccagacatgcgtggg
cccccagacatgcgtggacttcaggatatgagaggaccaccagacatgcgtggtcctcct
gacatgaggggtggccctgacatgcgtggtcctcctgacatgaggggtggccctgacatg
cgcggtcctcctgacatgaggggtggcccagatatgcgtggccttccggaaatgagaggt
ggtcctgacatgcgtggcccacctgaaatgaggggtggtccacatgacatgcgaggccca
cacgatatgagaggaccacctgatgtacgtggtcaacaggatatgaggagatctgatgta
agagggccacttgatatgcgtggccagcaacatatgaggggtactcaggacactaggggg
ccatctgatatgcacatttctccagacatacgaagccctcaagatataaggggttctcaa
gacatgcgcaatcttcaagatgttcgaggacccccggatatgagtggtcctcatgaaatg
agaggaccccaaaatagggggtcaaatttgggactttctcaagatactcgtggacagtca
gtagcccaaggtcccacaggaaattctcaaggtcctcacaattcgcagactgcagcaagg
gcatcccaccaatcacaacagaaaaccccattactgggagatggtcctaggccttttaac
cagggtggcaaaggccaggcccctcctcctttattaccaggcctcggaggacagccgaac
gcacaaggacgcccgccagcactgggacaaggacccaatcctaacaaaggtgacatgcgt
ggtccttcaaatcatcagtctgaacggagacgtgagccaagtcctttcagaggtggacca
gagtggatggactcgagagacagtagagggcctcctgacagaaggggtccacactctgag
ggacttgagcacccagatgattacaatcaggatgaccgttatggaccacgaggacgcgac
tttgatgcaagaagtggcagtgccccattacaagatgaaaagtggaggcgtggtacaggc
ccacagtttactccaaatcaccgagattttcctgatcgagaagctcgagattcaaatcga
tgggagggaaggagacactcagatgatcagtttgccagggactctgaagatggaaggttc
cggggacaaagagatgatagttttcgccggagtggtccctcaagacacgagggccgtgga
tctcgtggaagagaaggattttctaattctgacgactttggttctagtgatagctatgaa
aaggatgaacatggtagagggcgagagagttccagaggacgaggtcgtggtcctcagaga
gaagcaagaaaaggacttctccccacaccagatcagttttctggttcagaccgtggtcct
aatcaccagtcccgggatccaagcagagattcaggtccagatcacttccaaggcagccct
caacgggacattccaactcctgaaagtcactccccagctagcagggaacgctcctcttct
ttgcaaggaatggacatggcctccttaccaccacgcaagagaccctggcatgatggccct
ggaacccctgatcatagagatatggatgctggtttatcagatgacagtgggaaagggcca
ccaaaccggtcacaaagactaagccggtcaagctctcaagaacaagatgaaggctcgtct
aggggtactagaggaaactggggtagagggggatctggaacaagcagcaatatgaactct
cagtggagagggggtcctcggggtagcggaagcagcagtggaggtggaagaaatcgataa

DBGET integrated database retrieval system