Bufo gargarizans (Asiatic toad): 122937889
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Entry
122937889 CDS
T07965
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122937889 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgar03032
]
122937889 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122937889 (TOPBP1)
DNA replication proteins [BR:
bgar03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122937889 (TOPBP1)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122937889 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
BRCT_TopB1_SLF1
LIG3_BRCT
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
122937889
NCBI-ProteinID:
XP_044148992
LinkDB
All DBs
Position
5:complement(193432061..193606930)
Genome browser
AA seq
1513 aa
AA seq
DB search
MAKGENDPFFVKFVKTPDNTDFFYEAHEEIKAFQSDEYLHLIDEKEAVSLKEKDKSLYIC
DPFSGPVFNHLKKLGCRIVGPQVVIFCMKHQRCVPRAEYPVFNMAMADITISCTSLDKET
REEVHQYVQLMGGCVYKDLNVSVSHLIAGEVGSKKYLVAASLKKPILLPSWVKALWERSQ
QRIISHTDVDMEEYLCPIFLGCTICVTGLSSLDRKEVQRLSSLHGGQYTGQLKMNESTHL
IVHEAKGQKYECARKWNVHCVSIQWFFDSIERGFCQDESMYTMEPMLSTKIMPETSTPTS
STNKLDNRALSDVSHISNISINSCVNESAFNSVMSTRLEPPPDTLENLDISSLQAPEDLL
DGCRIYVCGFGGRKLDKLRRLINSGGGVRFNQLTGDVTHVIIGENDEELTQFLNKNNHRP
YILSVKWLLDSFSKGTLQPEETYFHSSYKPAEIQAPAQPVLSSSMQKTSSKVPVKTDNLA
QNHQADEDLLSQYTENDITLIGPKSHETSNLNYFSHSSVQGDMPSYSSQSGFGETSTIIE
GGLFSKKRFLVLGFVEEDEACIIDIIKKNAGKVLSAQKRIIAQYAVVPLLGCEVEATVEE
VVTNAWLGMCIEQETLLDPQSNSLFTPVVYVEGSTPLKDCVLSVSQFMGAERDSLVYLAG
LLGAKVQEFFVRKANPKKGMFASTHLVLREPEGSKYEAAKKWNLPAVTMAWLLQCAKTGK
KADESRFLVENACENDKEESFVSQTYRPTIARPTLDTPDRQVNCPDALKKAAVTPLDMNR
FQSKAFQSVLSRHNRNVPTPSGENKLPAREPSLHLDTPSKFLCKDKLFKPSFDVKDALAA
LETPGGPIQKHRAQNTPLSEVIGRNLQLALANSNRQTAALTASPQLKTTEPKEVNQEPKI
LTDVVICVSKKLSKRQGDLNGIAASLGAEYRWCFDEGVTHFIYQGKQSDTNREFRSVKDR
AGIHIVSEHWLLSCAEEQRKVPESLYPYTYNPKMSLDISATQDGAHSSSKLSTAVSKHDE
NNGLTDDDDQIAEISPLKTNNNGNAQNEGSEVKGALTQTLEMRENFQRQLQELMSATSIV
KAQGQRTSLSRAGFDNSPSTPEGVRSSRNGRSWVLEARRNTRQPTADLNTEPSQNEQIIW
DDPTAREERAKLASNLQWPNSSSQYMEPPQPNIKTQNDDQAQFKESLTDTELADMEACEM
DNTAAEVFRKAKDFQSPAKEDQIIPTPQAPSIAFPLAKPMVAPQPKEMNEGPVMEERDKE
RRFQLSSLNPQERIDYCQLIEELGGIVIDKQCFDPSCTHIIVGHPLRNEKYLASMAAGKW
VLHRSYLEACRATKHFIKEDDYEWGSTSVLNAVSAINPQQRMLAEAAMRWRKKIQRIKQD
TGSVEGAFSGWRVILNVDQAKEAGFKRLLQSGGAKVFAGHSSSLFKEATHLFADFSKLKP
EDAKVNISEAASQGVNCLKPEYIADYLMKEPPPPPSSYCLPAAAPYLQVANNTVSRKRKN
SEESNDVKRSRLY
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtgaaaatgacccattctttgtgaaatttgtgaagacgcctgacaataca
gatttcttctatgaagctcatgaggaaatcaaagcatttcagtcagatgagtatctacac
ctaattgatgaaaaagaagctgttagcttaaaagagaaagacaagtctctttacatatgc
gaccccttcagtggtcctgtttttaaccatctcaagaagcttggttgtagaatagttgga
cctcaggtagttatattctgcatgaaacatcaacgatgtgttcctcgagctgaatacccc
gtcttcaacatggcaatggctgacatcacaatttcctgcacaagtcttgacaaagaaacc
agggaagaagttcatcagtacgtgcagttgatgggtggttgtgtctacaaagatcttaat
gtttcagtcagccatctaattgctggagaggttggcagcaaaaagtatcttgtggcagcc
agtctcaaaaaacctattctactgccttcatgggtaaaagccctatgggagaggtcacaa
caaaggattattagccacacagatgttgatatggaggaatatttgtgtcccatcttcctt
ggctgtaccatctgtgtgactggattaagcagtttggatagaaaggaggtccaaaggctt
tcttcccttcatggtggccaatatactggtcagctcaagatgaatgagtccacacatctt
attgtgcatgaggctaaaggtcagaaatatgagtgtgctagaaaatggaatgtgcattgt
gtctcaatccagtggttctttgatagtattgagagaggtttttgtcaggatgagagcatg
tacacgatggaacccatgttatccactaagattatgccagagacttccaccccaacaagc
agcactaacaaactagataatcgggcattgtctgatgtcagccatatttctaacattagt
attaacagctgtgtgaatgaatctgcctttaattctgtgatgagtacaagactggagccc
ccaccagatactcttgaaaacttggacattagttctttacaggctccagaagatctgctt
gatggctgcaggatatatgtatgtggttttggaggaagaaagctagataagctgaggagg
ctcattaacagtggaggaggagtacgatttaatcagctcactggtgacgttacccatgtt
atcattggagaaaatgatgaggaactgacacagtttttaaacaagaataatcacaggcct
tacattctatctgtaaagtggttattagacagtttttcaaaagggactctgcaaccggag
gaaacttactttcattcctcttataaacctgccgagatccaggcaccagctcaaccagtt
ctcagttcgtctatgcagaagacaagcagtaaagtcccagtaaaaacagacaacctggct
cagaatcatcaggctgatgaagacctgctatctcagtatacagaaaatgatataacacta
ataggtccaaaaagccatgaaacttcaaacttgaattatttttcccactcaagtgtacag
ggtgatatgccctcttacagcagccaaagtggttttggagaaacttctactataattgaa
ggaggcttgttcagtaagaaaagattcttggtcttgggttttgttgaggaggatgaagct
tgcataatagacataataaagaagaatgctggtaaagtattatctgcgcagaagagaatc
attgcccaatatgctgtggtgcctttactgggctgtgaagtggaggctacagttgaagaa
gttgtgactaatgcctggctaggaatgtgcatagaacaggagacgcttctggacccgcaa
tcaaattctctcttcacaccggtggtgtatgttgaaggcagcacaccactaaaagactgt
gttctttctgtgagccagtttatgggtgctgagagggattcattagtttatcttgcaggc
cttcttggagccaaagttcaagaatttttcgtaagaaaggcaaaccccaaaaaagggatg
tttgccagtactcaccttgttctcagagaacctgagggctctaaatatgaggcagctaag
aagtggaatctgcccgcagttactatggcatggcttctacaatgtgccaaaactggcaaa
aaagcagatgaaagccgctttcttgttgagaatgcctgtgaaaatgataaagaagaaagt
tttgtaagtcagacatatagaccaacaatagccagacctacactagatacaccagatcgt
caagtgaattgtccagatgcattgaaaaaagctgcagtaacccctttagatatgaatcgc
tttcagagcaaagcgtttcagtctgtattgtccaggcacaacagaaatgttccaacccct
agtggagagaataaactacctgcgagggaaccgtctttacatcttgatacaccatccaaa
tttctgtgcaaagataaactcttcaagccctcatttgacgtcaaggatgcccttgctgca
ctggaaacaccaggtggaccaattcagaaacatagggcccaaaatactcctttgtcagaa
gttataggcagaaatttgcagcttgctcttgcaaacagtaatagacaaactgccgctctc
actgcaagtcctcagctaaagactacggagccaaaagaggtaaatcaagaacctaaaata
cttactgatgtagttatatgtgtaagcaagaagcttagcaaaagacaaggagaccttaat
ggtatagcagcctcacttggagcggaatacaggtggtgctttgatgagggtgtaactcac
tttatttatcagggaaaacagagtgacaccaacagggaatttagatctgtaaaggacagg
gctggcatccacatcgtttctgaacattggctattgtcttgtgcagaagagcaaagaaaa
gtcccagagtctctttacccttatacatacaatccaaaaatgagtcttgacatcagtgct
acacaagatggagcgcacagtagcagtaaactttctacagcagtctcaaaacatgatgag
aataatggactaacagatgatgatgatcaaatagctgaaatttcgcctctaaagacgaat
aataatggaaatgctcaaaatgaaggaagtgaagtaaaaggagctcttacacagactcta
gaaatgagagagaatttccagcgacagcttcaagagctgatgtcagcaacatcaattgtg
aaggcacaaggacagaggacgtcattaagcagagcagggtttgataactctccttccact
cctgaaggagttcgttctagtagaaatggtcgtagctgggtgctggaagcaagaagaaat
actcgccagcccacagcagatctgaacacagagccatcacaaaatgaacaaattatttgg
gatgaccccacagcaagagaggagagagctaaactggcgagcaacttgcagtggcccaat
agttcttctcaatatatggaacctcctcagccgaatataaaaactcaaaatgatgatcaa
gcccagtttaaggaatccttaacggacacagaactagctgatatggaagcctgtgaaatg
gataacactgcagctgaggtatttagaaaagcaaaagatttccaatctccagccaaagag
gaccagataatccccactccgcaggctcccagtattgcctttccactagccaagccaatg
gtggctccacagcccaaggaaatgaatgaaggtccggtaatggaagagagagataaggaa
cgtcgattccagctttcttccttaaatccgcaggaaagaattgactactgccagctcata
gaagagctaggtggtatagtgatagacaagcagtgttttgacccaagttgtacacacatt
attgttggacatccactccgtaatgagaagtatcttgcttcaatggcagcagggaaatgg
gtgcttcatcgatcttacctggaggcctgtcgagctacaaagcattttatcaaggaagat
gactatgaatggggaagcacttcagtattgaatgctgtcagtgccattaatccgcaacaa
cgtatgttggccgaggcagcaatgaggtggaggaagaagatacagagaataaagcaagat
actggcagtgtggagggagctttcagtggatggcgagttatattaaatgtggaccaagcg
aaagaagctggatttaaacgtctcctgcagtctgggggagcaaaggtatttgctggccat
tcctcctctctgtttaaggaagcaactcacttgtttgcagattttagtaagctgaaacct
gaagatgcaaaagtcaatatatctgaagctgcatcacaaggggtgaactgtttaaagcca
gagtacattgcagattacctaatgaaggaaccaccccctcctcccagcagctattgtctc
ccagctgctgctccctatctacaggttgcaaacaacacagtatcccgaaaaaggaaaaac
tctgaagaatccaacgatgtgaaaagatctaggctgtattaa
DBGET
integrated database retrieval system
