Bufo gargarizans (Asiatic toad): 122937955
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Entry
122937955 CDS
T07965
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122937955 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122937955 (TRIM55)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122937955 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
PHP
Flagellin_C
Cbl_N
Sof1
Zn_ribbon_FGT1_2
GP67
Motif
Other DBs
NCBI-GeneID:
122937955
NCBI-ProteinID:
XP_044149108
LinkDB
All DBs
Position
5:complement(105822943..106043484)
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AA seq
552 aa
AA seq
DB search
MSTSLSYQSMSKEQQTMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGNTVATGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTKTTRPER
KSNQPMCEEHEEEKINIYCLTCEVPTCSMCKVFGAHKNCEVAPLSHVFQGQKTELSDGIA
ILVGCNDRIQAVISQLEETCKAVEENSRRQKEQLSEKFDYLYAVLEERKGELTQVITRNQ
EEKLEYVKSLMKKYADHMEIVAKLVESGIQFMDEPEMAMFLQNAKGLLQKITEASRGSQM
EKIESGYENMNHLTVELNREEKIIREIDFYREVEEEEEEVAVDEDSEDAHTESSGEEDVS
ERVTQKPTPTSDTTITTTNQNEEQTTPQEAERPMPQGGVEPSGIQQTPNVQVLSTAETSD
HLFYPSWYKSQVRQQSKPNKLPLNDAVRQIDPSIPKEMTVKKVEPAAGLLKESVVVAGKE
TSPSADNPQISLHTSSPQEMRPLMLERSTGEWTGSETLVQEDAQGTTESNQSDNTDALRH
VFSFSWLNTLPE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctctctgtcctaccagtccatgagcaaagagcagcaaactatggataacttg
gagaagcaacttatttgtccaatatgtttagaaatgttttccaaacccgtggtaatcctt
ccttgtcagcataacctgtgcaggaagtgcgccagcgacatatttcaggcctccaatcca
tatttaccaacaagaggaggaaatactgtagccacgggaggtcgcttccgctgtccatcc
tgtaggcatgaagtggtactggatcgacatggcgtatatggattacagagaaacctgctt
gttgaaaatatcattgatatttataagcaagaatcaaccaaaactacaaggcccgaaaga
aaatctaaccaaccaatgtgcgaagaacacgaagaagaaaaaattaacatttactgtctg
acttgtgaggtgccaacatgttccatgtgtaaagtatttggagctcacaaaaattgtgaa
gtagcccctctttctcacgttttccagggtcaaaagactgaattatcagatggcattgct
atactggttggatgtaatgatcggattcaagcagtgatcagtcaactagaagagacctgt
aaagctgtagaggaaaacagtagaagacagaaagaacagctgagtgagaaattcgattac
ttatatgcagttcttgaagaaaggaaaggtgaactgactcaagttatcacaagaaaccaa
gaagagaaacttgaatatgttaagtcgttaatgaagaagtatgcagatcatatggaaatt
gtcgcaaagctagtagaatcaggaattcagttcatggatgagcctgaaatggcaatgttc
cttcaaaatgctaaaggtttactacaaaaaattacagaagcatctagaggatcccagatg
gaaaaaattgagtccgggtatgaaaatatgaaccacttaacagtggagctcaaccgagaa
gagaaaataattcgagaaattgatttttatagggaagttgaagaggaggaagaagaagtg
gcagtggatgaagactcagaggacgctcatacagagtcttcaggtgaagaggatgtctca
gagagagtgactcaaaaacctacccctacctctgacaccacaattacaaccacaaaccaa
aacgaagaacaaactacacctcaggaagcagaacggccaatgcctcaaggtggtgttgag
ccaagtggtattcaacagactcctaacgttcaagtactctcaactgcagaaacctcagat
cacttgttttatcctagctggtataagagccaagtgcggcaacaatccaaaccaaacaag
cttccgctgaatgatgctgtgcgtcaaatagatccttccattcctaaggaaatgactgta
aagaaagtagagccagcggcaggactccttaaggagagtgtggtagtggctggtaaggaa
accagtccatctgcagataatcctcagattagtcttcacacttccagtccacaagagatg
agacccttgatgctggaacgtagcaccggtgaatggactgggtctgagacattggtccaa
gaagatgctcaagggactacagaatctaatcagtctgacaacacagacgctttacgtcat
gtattctctttctcctggcttaatacattacctgaatag
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