Bufo gargarizans (Asiatic toad): 122937971
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Entry
122937971 CDS
T07965
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122937971 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122937971 (DROSHA)
03009 Ribosome biogenesis [BR:
bgar03009
]
122937971 (DROSHA)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122937971 (DROSHA)
Enzymes [BR:
bgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
122937971 (DROSHA)
Messenger RNA biogenesis [BR:
bgar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
122937971 (DROSHA)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
90S particles
RNase
122937971 (DROSHA)
Prokaryotic type
rRNA processing factors
122937971 (DROSHA)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
122937971 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
122937971
NCBI-ProteinID:
XP_044149140
LinkDB
All DBs
Position
5:complement(302377845..302683601)
Genome browser
AA seq
1326 aa
AA seq
DB search
MSLQTGREGQSARGAQTASMQTYRPQNVRPTQLQQSSGQYSYDTQSAPPPMFSSLPNTSY
MPPRPDYMCYPPPVTPPTQSTVNQCLPRPTYPVRQSYPMPPCFPPVPPSTLGPSNPPPAG
PPTAQSTYPYMVPPLMPPPPIMPPPLPHVGYQPVYPSGYPPQSFPPPPPPLQPVSNFSSY
QQNSASFQGSSHYRHTSHSQYQADKPQSDHRAADRGKHYDAHRHREYSHSDRHRSEKHCD
RRDRGRSPDRTRRSDSSRRRSEYEYSRTPSHGRTPPRHGSYERSRDRHRHRESRRSPSPD
RSYRKRPKSPSPTRDRKKARWEEEKDTASESPSSRKESSYTLLKDKELLDEGLLDRNDEE
DEDLLKPVWVRCTHSESYYSSDPMDQVGDSTVVGTSRLRDLFDKFEEELGKRQSKARAAR
PAWEPPKTKLDEDLESSSDSDCDTDDDSCSSSSDSEVFDVIAEIKRKKAHPDRLHEELWY
NDPGQMNVGPLCKCSIKAKRTGIRHSIYPGEESIKACRPMTNNAGRLFHYRITVSPPTNF
LTDRPTVIEYDDHEYIFEGFSMFSHAPLTNIPLCKVIRFNIDYTIHFIEEMMPEHFCVKG
LEVFSSYLFRDILELHDWNLIGPPVEETSSKCPQFHFMPRFVRFLPDGGKEVLSMHQVLQ
YLLRSNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPEMKPSSVRIDQLDREQFNP
EVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLVQREEA
LQKIRQKNTMRREVTVELSSQGFWKSGIRSDVCQHAMMLPVLTHHIRYHKCLMHLDRLIG
YVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHYMHMRKKGINT
LINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYFLFPNLEEGGLATYRTAIV
QNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALMGAVYLEGGLEEAKQLF
GRVLFFNKDLRDVWLNYPLHPLQLQEPNTDRQLIETSPVLKKLTKFEEVIGVKFTHIRLL
ARAYTLRTVGFNHLTLGHNQRMEFLGDSIMQLVASEYLFIHFPGHHEGHLTLLRSSLVNN
RTQAKVAEELGMQEFAIANDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVC
FFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYF
KGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRLEREQQDN
TEDVRK
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcaaacaggaagagaagggcaatcggctagaggagctcagacggcttcgatg
cagacatatcggccacaaaatgtaaggcccacccagttacagcaatcttctggccagtat
tcctatgatacccaaagtgctccacctcccatgttttctagccttccaaatactagttac
atgcctcctaggccggattacatgtgctacccaccgcctgtgactccaccaacacaaagt
actgtaaaccagtgtctgcccaggccaacgtatcctgtcaggcaaagttacccaatgcca
ccctgttttcctcctgtccctccttctactcttgggccaagtaatcccccgcctgcgggc
cctcccactgcccaaagcacttatccttacatggtgcctcctctaatgccaccgccacct
attatgccccctcctttgccccatgtaggctatcaaccagtatatccctctggttatccg
ccacagtcctttccaccaccaccacccccactgcagccagtatctaactttagtagctac
caacagaattcagcctcttttcagggcagtagccattaccggcacactagtcacagtcag
taccaagccgacaaaccacaaagcgatcacagggcagcagataggggtaagcactatgat
gctcatcgacacagagagtacagccatagtgacagacatcgttctgaaaaacattgtgat
cgaagagatcgtggaaggagtcctgaccggacaagaagatcagacagcagtcgacgtaga
tcggagtatgaatacagtaggaccccgtctcatggaaggacccctccccgacatgggagt
tatgaacgaagcagggataggcacaggcatcgggagagtcgaagatcaccaagtcctgac
agaagttatcggaagaggccaaaaagtccttcccctactagagatcgtaagaaagcaaga
tgggaagaagaaaaggatacggcctctgaaagcccatcgtcccgcaaagaaagcagttat
actttgctgaaagacaaggagcttctggatgagggcctcctggacaggaatgatgaggaa
gatgaggatttgctaaaacctgtgtgggtccgttgcacccactctgaaagttactactct
agtgatcccatggaccaagtaggcgattccacggtggtcggcacaagcaggttacgggat
ttgtttgacaagtttgaagaagaacttggcaagcgtcaatcaaaagctagagctgctagg
ccagcgtgggagccaccaaagaccaaattagatgaggatttagagagctccagtgactct
gactgtgatacagatgatgacagctgctccagcagctccgattctgaggtctttgatgtg
attgctgaaataaagaggaagaaagctcatcctgaccgtcttcatgaagaactgtggtat
aacgaccctggccagatgaatgttggtcccctatgcaagtgcagcattaaagccaaacgg
acggggatccggcacagtatctatccaggagaggagtcgatcaaagcgtgccgtccgatg
accaacaatgcagggcgcctttttcactacaggattacagtgtctccaccgacaaatttc
ttaactgaccggcccacggtgatagagtatgatgatcacgaatacatctttgaaggcttt
tctatgttctctcatgctccactcacaaacattcccctgtgcaaagtaatccggtttaac
attgactacacaattcatttcattgaggaaatgatgcccgagcatttctgtgtgaaggga
ctggaagtgttttcctcctatctgttcagggacatattagagcttcatgactggaatctt
attggtcctcctgttgaagaaactagctccaaatgcccacagtttcattttatgcctcgc
tttgtaagatttctgccagatgggggtaaagaagttctctccatgcaccaagtcctgcag
tacttactaaggagtaacaaggctttagtgccggaagaagagattgcaaacatgctccag
tgggaggaacttgaatggcagaagtatgcagaagaatgtaaaggaatgattgtcaccaac
cccgaaatgaaaccaagctcagttcgaattgatcagcttgaccgggagcaatttaatcca
gaagtaattacgttccctattattgtccatttcggtataagacctgcccagctcagctat
gccggagacccacagtaccagaagctatggaaaagctacgtaaaactgcgccatctactg
gctaatagccccaaagtcaaacaagctgataagcagaaattggtccagagggaggaggct
cttcagaagatcagacagaagaacacaatgaggcgtgaagtgacagtagaactgagtagc
cagggtttttggaaatctggcattcgctcggatgtctgccagcatgcaatgatgctgcca
gtgctgacccatcacattcgctatcataagtgccttatgcatttagacagactaattgga
tatgtgtttaaggagcgctgtttgctgcagctggcaatgactcatccgagtcaccattta
aattttgggatgaaccctgatcacgcccgcaactctctttctaattgtggaattaggcag
ccaaagtatggagatcgtaaagtccattacatgcacatgcggaaaaagggaataaatacg
ctgataaacatcatgtcccgtctgggtcaagatgatccgaccccttcacgaataaaccat
aatgaacggctggagttcttgggtgatgctgtggttgaatttttaacaagtgtccacctg
tactttctgtttcctaatcttgaggaaggaggtttggctacgtataggacggctattgtt
caaaatcagcatcttgcaatgttggctaagaagttggagctggatcgtttcatgctgtac
gcacacggaccagacttgtgtagagagtcagatctgcggcatgccatggccaactgcttt
gaagcattaatgggggcggtgtatctggaaggtggccttgaagaagcaaagcagctattc
gggagagttctgttttttaataaggacctgcgggacgtgtggcttaattatccactacac
cctcttcaactgcaagagcctaacactgatcgacaactgattgagacatcaccggtacta
aagaagctgaccaaatttgaagaagtgattggagttaagtttacgcacatacgacttctg
gctcgagcatacaccttgagaacagtgggatttaaccatctgaccttaggccacaaccag
aggatggaattcttgggcgactctataatgcagctggtagcctccgaatatttattcatc
catttccccggtcatcacgagggccacttaacgctgctgcgtagttcactggtgaacaac
aggactcaggccaaggtagcagaagagctgggtatgcaggagtttgccattgctaatgat
aaaacaaagagacctgtggccctcaggaccaagactttggctgacctgcttgaatctttt
attgctgcactttatatcgacaaggacttggaatacgtccacacatttatgaatgtatgc
ttcttcccaagactcaaggagttcattttaaatcaagactggaatgatccaaagtcacag
cttcagcagtgttgtctgaccttgagaactgaagggaaggaaccagacatccccctgtac
aagactcttcaaactgttggaccttctcacgcaaggacgtacaccgttgctgtgtatttc
aaaggcgaacgcattggctgcggtaaagggccgagtattcagcaggctgagatgggggct
gccatggacgccttggaaaaatataacttcccccagatggctcatcagaagcgttttatt
gaacggaagtacaggcaggaattgaaagaaatgaggttggagagggagcaacaagacaac
acagaggacgtgagaaaataa
DBGET
integrated database retrieval system
