Bufo gargarizans (Asiatic toad): 122938038
Help
Entry
122938038 CDS
T07965
Name
(RefSeq) LOW QUALITY PROTEIN: NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122938038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
NPHP3_N
AAA_5
PhoH
nSTAND3
Motif
Other DBs
NCBI-GeneID:
122938038
NCBI-ProteinID:
XP_044149242
LinkDB
All DBs
Position
5:278703605..278935445
Genome browser
AA seq
1757 aa
AA seq
DB search
MNSNKSQSIWVTIQLNERIMETEEDSQCEDPSNTSSGTSEHHRDQETRDNADVDNLADKL
ITLGSNWRRKGNLKTNTHRLEKSRYYPTKGNTDECDFPNADSSHNWRTREDHHNAEKKQS
DESKYDISRGDFSSNWRIRENYDTEESEQTEKPRFEFTRQNKGTRFSSQTGFNSRENHDT
VESEQTEKPRYEFTRQNKGTRFSSQTGFNSRENQDTEESEQTEKPRYEFTRQNKGTRFSS
QTGFNSRGNYENKGKKYSILKSLGIVNYDEGKKNLIKRQKTRELDILELRKMERLEPSEI
IMALAAPNSGFEQLVNEATMDPELVKKLLELLSKATECMSSRQNLIHILSHVLNSLFLKQ
ILSSYILQCSTSQQSEEICLIVDHSLTVLTEILSIFPSSSFADVTIVKTVLESVMEQMEA
NGTIFSEKTKQNIATLKLFLQNLQDKKQDGTLKSDNYIYVVGKKGLVLSDDFRNVSVFPT
HDDIYLKTSPHLPPNIIDGTYPDVTSYLNTHFSLLREDFIRPLRDGISQYLRGQNSNYID
DIRLYFDVSVLDSVCVQSGIVYNVKFSTKHLKYIIWENSQRLLYGSLVCLSNDNFNNMLF
ATVAEREISNIKKGIITLMFHEESREQLALYADDNRLFVMAETTAYFEAYQHTLEGLKEM
KEYDFPLQNYIVHCETTMSPPAYLFNNLQSSFTLQVLEHHTRLDVSDKATCYEINKNKTK
PLKFNVLDLNTWPSKEELEFDSSQFEAFEKSLTSELSIIQGPPGTGKTYVGMKIVHALLN
NGHIWKQGHRPILIVCYTNHALDQFLEGIYKSSRCSIVRVGSRSNSKLMQAFSLTALRKR
FKESSSVYHHFDWYEDLDEDYSKDMLETLKEEADSKKYEILSRRKIIDSAYSKVLSEYDM
KKYINDDVFLNFISSKESKILMNNIRDDWLGLAPLYLKPCSKINKKVKEKDNNAVPENKE
ENIDVNKAPEIALFERQLDGDDINEELAQIRASKNKDLTSESTVHNYILEDLDNDSEWEI
SPEERKRLQRKMENELIQKHYMSEEEYEQMSDICNIPIYKRWEIYRLWRHKVIKGVRLEI
IRLEDDYQILINRLAELRNQLDCSILKKADIIGMTTTGAAKYRKLLQVVQPRIVIVEEAA
EVLEAHIITALSHSCQHLILIGDHQQLRPATTVYEVAKNFNLEVSMFERLIRMGIPYVRL
NYQHRMRPEIAKLLTPHIYDKLENHESVYKYDNVKGVCQNLFFVDHNHLEDHISEGKSHQ
NVHEATFVKSLCLYFIHQGYSPSNITILTTYSGQLHCLQNMMPKAQFDGVRVCVVDKYQG
EENEIIILSLVRSNLEGNVGFLKIPNRVCVALSRAKKGLFCIGNMQMLSKVPIWKKICDA
LKENEQIGKELKVQCVIHPNTTTYLSTFKDFDNVPEGGCMIPCDYRLDCGHVCALRCHPY
DPKHVEINCVKPCLKIPCIKGHKCKKMCFEPCGDCQELVPKKIPICGHIQDLPCSKVPVK
SDCKNPCTKTFSCGHSCRSSCGTVCPTQCTTDVSITLICGHIFDIACFLKSSIFVKIECS
DDNLYVGPCNICLGIRIEKTLYSRLLSETETHCLHDTSRYCTYEGSSIFKRVICDLHKEE
KTVVNQWQSELQNFVQNNEAIFAQVYNASQMIEEIKRMQKTISQMILTSEKIKLLFKIAA
CESKRKDLHLNVSQQEVSTFTCNDYKNYQIIKEYIKLKNLEEAARINELEDDTDVISRLT
NERNILSMSILRSSWYH
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgaactccaacaaatcgcaatccatatgggttactattcagcttaacgaaagaattatg
gaaacagaagaagacagtcagtgtgaggatcccagcaatacatcttcagggacatcagaa
catcacagagatcaggaaaccagagacaatgcagatgtggataatttggcagataaactg
atcactctaggtagtaactggcgaagaaaagggaaccttaaaactaatactcatcgactt
gaaaaaagtaggtactatcctacaaaaggaaacacagatgagtgtgattttccaaatgca
gactcaagtcacaactggagaacaagagaggatcatcacaatgctgaaaagaaacagtcc
gatgaatcaaaatatgacatttctaggggagatttcagtagcaactggagaatcagagag
aattacgatactgaagagtctgaacagactgaaaaaccaaggtttgaatttacaagacaa
aataaaggaacaagattttcatcacaaactggattcaacagcagagagaatcacgatact
gtagagtctgaacagactgaaaaaccaaggtatgaatttacaagacaaaataaaggaaca
agattttcatcacaaactggattcaacagcagagagaatcaagatactgaagagtctgaa
cagactgaaaaaccaaggtatgaatttacaagacaaaataaaggaacaagattttcatca
caaactggattcaacagcagaggaaattatgaaaacaaaggtaaaaagtattcaattctt
aaaagccttggtatcgtaaactatgacgaagggaagaaaaacctaatcaagagacagaaa
acaagagagcttgacattctggaactcagaaaaatggaaaggcttgaaccttctgagatc
ataatggcacttgctgcacccaatagtggttttgagcaacttgtaaatgaagcaaccatg
gatcctgagttggtgaagaaacttcttgaactattaagcaaagccactgagtgcatgtca
agtcgccaaaatttaatacatatcttaagccatgtccttaattcccttttcctgaagcaa
atcctctcatcctacattttgcagtgcagcactagtcagcagagtgaagaaatatgctta
attgtggatcactcccttactgtgctgactgagattctaagtatttttccatctagttcc
tttgcagatgtaaccatagtcaaaactgttcttgaaagtgttatggaacagatggaagca
aatggcacaattttttcagagaaaacaaaacaaaacatagcaacgctaaagctttttcta
cagaacttacaagacaaaaagcaagatggaacgctcaaatctgataattatatctatgta
gttggaaaaaagggtcttgttctcagtgatgacttccgtaacgtctcagtgtttccaaca
catgatgatatttatttaaaaaccagtcctcatttgcccccaaatatcatagacggaact
tatcctgatgttacatcctacctcaacactcacttttctttattaagagaagacttcatt
cgcccactaagagatggtatttctcaatacttaagagggcagaacagtaattatattgat
gatatccgtttatattttgacgtatcagttttggattctgtttgtgtccaatcagggatt
gtttataatgtcaaattttcaaccaaacatctgaaatatattatttgggaaaattcacaa
cgcctgctctatggttcccttgtctgtctttcgaatgacaacttcaataatatgttattt
gctactgtggcagaaagagaaattagtaatatcaagaaaggaattataactttaatgttc
catgaagaaagtcgtgaacagctggcattgtatgcagatgataatcgtctgtttgtgatg
gctgaaacaactgcatattttgaagcctatcagcataccctagagggtctcaaagaaatg
aaagaatatgattttccattacagaattacattgtgcattgtgagacgactatgtctcct
cctgcttatttattcaacaatcttcagtcttcatttactttacaagtgcttgaacaccat
acacgtttagacgtttcagataaggcaacctgctatgagattaataaaaataaaaccaag
cctctcaagtttaatgtgcttgatcttaacacatggccctcgaaagaagagcttgaattt
gacagttctcaattcgaagcattcgagaaaagtctaacaagtgagctatccattatacaa
ggtcctccaggcacaggaaagacatatgttggaatgaaaattgttcatgctcttctgaat
aatggacatatttggaagcaaggacacaggcccatactgatcgtttgctacaccaaccat
gctctagatcaatttctggaaggtatatataaatccagccgctgcagtatcgttagagtg
ggatcaaggagcaacagcaagctcatgcaggcattctctttgactgcactgagaaagaga
tttaaagaatcttcaagcgtttatcatcattttgactggtatgaggacttggatgaagat
tattcaaaagacatgcttgaaacattgaaggaagaagcagactctaagaaatatgaaatt
ttatctagaagaaagataattgacagtgcttatagtaaagtactatcagaatacgacatg
aagaagtacattaatgatgatgttttccttaacttcatctctagcaaggaaagcaagatt
ttaatgaacaatatccgagatgactggctgggtttagcaccactttacctcaaaccatgt
agcaaaataaacaaaaaagtcaaagaaaaagataacaatgcggttcctgaaaataaagaa
gaaaatattgatgttaataaagcacctgaaattgcattatttgaacgccaacttgatggt
gatgatataaatgaagagttagcacaaataagagcaagcaaaaataaggacctgacttct
gaatctacagtacacaattatattctggaggaccttgataatgatagtgaatgggagata
agtccagaagaaagaaaaagactgcaacgaaaaatggaaaacgagttgatacaaaaacat
tacatgagtgaagaggaatatgaacagatgtcagatatttgtaacattccaatttataag
cgttgggaaatttacagattgtggagacacaaagttattaaaggagttcgcctagagatc
attagactagaagatgactatcaaatactgatcaacaggctggctgaactacgaaatcaa
ctggattgctctatactgaaaaaagctgacatcataggaatgactacaacaggtgcagca
aaatataggaaacttctacaagttgttcaaccaagaattgtcattgttgaagaggctgct
gaagttttggaagcacacattataacagcgctaagccatagctgccaacaccttatccta
attggagaccaccagcagctccgcccagcaacaactgtgtatgaagtggcaaaaaatttt
aatctggaagtgtcaatgtttgagagactgatcagaatgggcataccatacgtccgcctt
aactatcaacatcgaatgaggccagaaatagcaaaactactgacaccgcatatttatgac
aaactggagaatcatgaatctgtatataaatatgacaatgtaaagggtgtttgccaaaat
ctcttttttgtcgaccacaaccatcttgaggaccacatcagtgaaggcaagagtcatcag
aatgtccatgaggccacttttgtgaagtcattatgcctctattttatacatcaaggctac
tctccatcaaacataacaatactcactacttattctggacagctgcactgtttacagaat
atgatgcccaaagctcaatttgacggagtcagggtatgtgtggttgataaatatcaagga
gaggaaaatgaaattatcatcctctcgctagtaaggagtaacctagaaggcaatgttggt
tttcttaaaataccaaaccgggtatgtgttgcattatcaagagccaagaaaggcttattt
tgcatagggaacatgcagatgctttcaaaagttcccatctggaaaaaaatctgtgatgcg
ttaaaagaaaatgaacaaattgggaaagagctaaaggtacaatgtgttattcatccaaac
accacaacttatttgtcaacttttaaagattttgataatgttccagaaggtggctgtatg
ataccttgtgactatcgtctagattgcgggcatgtctgtgcccttcggtgccacccttat
gatcctaaacatgtggaaattaactgtgtaaagccatgtctcaagattccctgtataaaa
ggtcacaagtgtaagaaaatgtgttttgagccgtgtggagactgtcaggagttggtgcca
aaaaagattcctatatgtggtcatattcaagatttaccatgttcaaaggtacctgttaaa
tcagattgtaaaaacccttgcaccaaaaccttttcttgtggccattcctgtagaagttca
tgtggtactgtttgccccacacagtgtactacagatgtctctattactctaatatgtggt
cacatattcgatattgcatgctttttgaaatctagtatttttgtaaaaattgaatgttca
gatgataatttatatgttggaccatgcaatatatgccttggaattagaatagaaaaaaca
ctgtattctcgtctcctaagcgaaacagaaacccactgtctgcatgatacgagcagatat
tgtacatatgaaggttccagcattttcaagagagtcatatgtgatcttcacaaagaagaa
aaaacagtagttaatcaatggcagtctgagttgcagaattttgttcaaaacaatgaagct
atatttgctcaggtatataatgctagtcaaatgattgaagaaatcaaacgtatgcaaaag
acaatatcacagatgatactcacaagtgaaaaaataaaacttttattcaaaattgctgct
tgtgaaagcaaacgaaaagatctccatttgaatgtatcacagcaagaagtgtccacattt
acatgtaatgattacaagaattatcagattataaaggagtacataaagcttaaaaacttg
gaggaggcagcaagaatcaatgaactggaagatgatactgatgtcatttctagattaacc
aatgaaagaaatattctttccatgagcattctgcgatctagctggtatcattaa
DBGET
integrated database retrieval system
