Bufo gargarizans (Asiatic toad): 122939600
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Entry
122939600 CDS
T07965
Symbol
HTT
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122939600 (HTT)
04131 Membrane trafficking [BR:
bgar04131
]
122939600 (HTT)
03029 Mitochondrial biogenesis [BR:
bgar03029
]
122939600 (HTT)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122939600 (HTT)
Membrane trafficking [BR:
bgar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122939600 (HTT)
Mitochondrial biogenesis [BR:
bgar03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122939600 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT_GCN1
HEAT_2
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
122939600
NCBI-ProteinID:
XP_044151644
LinkDB
All DBs
Position
1:60342337..60532654
Genome browser
AA seq
3096 aa
AA seq
DB search
MATMEKLMRAFESLKSFQQQGPAVAEEPVHKPKKDPSTNKKDRVTHCLTIYENIVAQSLR
NSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNKVVKALMDSNLPRLQLELYKEIKK
NGAPRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTKISKRQEESVQETLAAAVPKIM
AAFGNFANDHEIKVLLKAFIANLKSSSPTIRRTAAGSAVHICQHSRRTQYFYAWLLNVLL
GLLVPVEDERPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKEAEISPSVEQLTQ
IYELTLHYTQHRDHNVVTGALELLQQMFRTPPIELLHVLTASGGIPHVSVCRDEARGRSR
SGSIGELIGKLHLGEEEGLEDDTEAKSEVPAAPRCSSGVKSEESSDTGASSGAPAATSSI
DSTTHDIITEQPRSQHTLQSDSVDLSSSDLASTVTEGEEEDMLSRSSSQISTVQSDPNTD
LNEGTTRASSPVSDSSQTTTEGPDSAVTPSDSSEIVIDGTENQYSGMQIGQLQDEEDEGA
IIPQGEPADRFTNPSLGLNQSHLLKTIGHSRQSSDSSVDRFVAKEEVVEPGDLENKPSRI
KGDIGHYTDDDSEPLVHCVRLLSASFLLTGQKGAMVPDRAVRVSVKALALSCVGAAVALH
PEAFFSRLYKLQPESLDHPEMQYVSDILSYIDHGDPQVRGATSLLCGTIVYSILNKSRYN
AEHWVTVVKNRTGNNFSLEDCIPLLQKSLKDESSVTCKMACAAVRHCISSLCCSTYSELG
LQLMVDLLTLKNSSYWLVRTELLETLAEIDFRLVSFLEGRADGEHRGVHSYTGLLHLQER
VLNEVIISLLGDEDARVRHVAAASLARSVPKFFYSCDQGQADPVVAAARDQSSVYLKLLM
HETQPASHFYVSTITRIYRGYNIVQGPTDVSMENNLSKVITAVSHALTTSTTRALTFGCC
EALCLLSLQFPVCTWSVGWHCGYIISSGAQASRIQVYKNRGRSFSISQQSPSEEPRKSCT
AGMANMILSLLSSAWFPLDLSAHQDALILTGNLLAATAPKSLKNPWTPEDEANQPTNKQE
EPWPALSDRSIVSMVDQLFIHLLKAINICAHVIDDVTPGPVVKATLPSLTNPPSLSPIRR
KGKDKESAEQTAVPLSPKKSTDATPASRQTDASGPAQASKSLGSFYHLPSYLKLYDVLKA
TYANYKVTLDLQNNNEKFGSFLRAALDVLSQILELATLNDIGKCVEEILGYLKSCFSREP
VMATVCVQQLLKTLFGTNLASQFEALSSNPGKSQGKAQRLGSSNLRPGLYHYCFMAPYTH
FTQALADASLRNMVQADQEQDTSGWFDVLQKVSSQLKNSITTVTKHRADKNTIHNHIRLF
EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG
QFRESEAIIPNVFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI
VHDLFVLRGANKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR
LSRQIADVILPMLAKQQMHIDSHEALGVLNSLFETLAPSALRPVDMLLRSMFVIPYTMAS
VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPLLISCQNITRLRDNTHQNSEED
AELNQITVPPEETFSRFLLQLVGILLEDIVHKELKVDMSEQQHTFYCQQLGTLLMCLVHI
FKSGTFRRITSAATRLFKGSGDNGTFYTLESLSDLVESMFPTHPSLVLLWCQFLLLIDYT
NYSWWSEVHQTLKRNNLSSTKLLLSPQISTDSEEAEPQSKLGMCNREIVRRGALILFCDY
VCQNLHDSEHLTWLIVNHVQDLIYLSHEPPVQDFISAIHRNSAASGLFIQAIQSRCENLA
TPTSLKKTLQCLEGIHLSQSGAVLTLYIDKLLCTPFRVLARMVDTLACRRVEMLLAATPQ
NSMCQLPVEELDRMQEYLQSSALAQRHQRLYSLLDRFRSTVAPETISPLPLVTSHPLDGE
NPPQLETLEPDEAWYVSLVRSQCYTHSDSALLEGAELVNRIPPSERLSFMTSKEFNLSLL
APCLSLGVNQMLGDQNSTFFETTRSVVLDLISQTVQQLPATHQLFQPLQPMDGSSYWEKL
SLVLGDAEVYYSLVTLCRALAQFLLSLPKIPPSLHITPEKEADVVKFVVMSVEAVSWHLV
HEQIPLSVDLQAVLDCCCLTLQQPVLWNLLASAEYMTHACSLISCTRFIIEAVAVKPGEQ
LLSPERKKNNLDDETAADEAESDTTGAAFVRTACVMMSEMVDSLQTVLLFGHKRNVNIAA
FLTPVFRNIIISLARLPIVNSYTRVPPLVWKLGWSPKTGGEFGTSLPEIPVEFLQEKEVF
KEFIYRINTLGWTSRTQFEETWATLLGVLVTQPIVMDQEESQQEEDTERTQINVLAVQAI
TSLVLSAMTIPSAGNPAISALEQQPRNKALKALDTRFGRKLSVVRGIVEQEIQAMVSKRD
NIATHHAYQAWDPVPCLSAATTGALISHEKLLLQINTEREIGSMRYKLGQVSIHSVWLGN
NITPLRQEELDEEEEDESDVPAPSSPPTSPINSRKHRAGVDIHSCSQFLLELYSQWVLPS
NTGKKTPVILISEVVRSLLAVSDLFTERNQFEMMYTALTELHKQHPCEDEILIQYLVPAI
CKAAAVLGMDKAIAEPVSRLLESTLRSTHMPSRIGALHGVLYVLECDLLDDTAKQLIPII
SDYLLSNLRGIAHCVNLHNRQHVLVMCAAAFYMIENYPLDVGPEFTAGIIQMCGVMVSGS
DESTPSMIYHCVLRGLERLLLSEQLSRLDGEALVKLSVDRVNMHSPHRAMTALGLMLTCM
YTGKEKFSPGRTAEPSPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD
FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHATGQSSMVRDWVMLSLSNFTQR
TPVAMAMWSLSCFFVSASTSKWISAILPHVISRMGKSEPVDINLFCLVAIDFYKHQIDEE
LDRRAFQSVFELVAAPGSPYHSLLTCLQNVHKVTVF
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgagagccttcgaatccctgaaatccttccagcagcag
ggaccggcggtggcggaggagccggtgcacaagccgaagaaagatccttctacgaacaag
aaagatcgcgtgactcattgtctgacgatatacgagaacattgtggctcagtctctcagg
aattctccagagttccagaagttgcttggtattgccatggagctcttcctcctgtgcagt
gacgacgcggagtctgacgtcaggatggtggcggatgaatgcctcaacaaagtggtaaaa
gctttgatggactccaatctcccgcggctgcagctggagctgtacaaagagataaagaag
aatggcgcacctcggagcctcagggctgccctgtggaggtttgctgagttggcgcacctt
gtacgaccacaaaagtgcagaccttacctggtgaacctacttccttgcctcacgaagata
tccaaacgtcaggaagaatcggtacaagagaccctggctgctgctgtcccaaagatcatg
gctgcctttggtaactttgccaatgatcatgaaatcaaggttttgctgaaagcgtttata
gccaatctgaaatctagctctcccacaatccgacgcacagcagctggttctgccgtccac
atctgtcagcattcccggcgaacgcagtatttctacgcttggcttctcaacgtactgctg
ggtttgttggttcctgttgaggatgaacgccctactcttttgattctgggcgtcctgtta
acactacgctatctaataccactactacagcagcaggtgaaggacaccagtctgaaagga
agctttggggtgacgcggaaagaggccgaaatctccccttcagtggagcagctaacacag
atttatgaactgacgttacattacacccaacaccgggatcataatgtggtgacgggagct
ctggagctgctgcagcagatgttcaggacacctcccatcgagctcctccatgttctgacc
gcgtccggaggcatcccacatgtcagcgtgtgccgagatgaagcgcgcggccgcagtcgt
agtgggagcattggagagctcataggtaaactccacctgggtgaagaggaaggcttagaa
gatgatacagaagcgaagtccgaagtccccgctgctccccgctgctcgtccggcgttaag
agcgaagaatcgtctgatacaggagcgtcttctggcgctcctgctgctacctcttctata
gactctacaactcacgatattataacagaacagccgcggtcacagcacaccctgcagtcc
gattctgtggacctcagcagctctgacctggccagcacagtaaccgaaggcgaggaggag
gacatgttaagtcgcagctcaagtcaaatcagcactgtccagtctgacccaaatacggac
ttaaacgagggaaccactcgggcttcctccccagtgagcgatagctcacaaaccaccaca
gaaggtccagattctgctgtgaccccttcggacagttcggaaattgtgatcgatggcact
gagaaccagtattctgggatgcagataggacagcttcaggatgaggaagacgaaggggca
atcattccccagggagagccagccgatcgttttacaaacccgtctcttggtcttaaccag
agtcacctgttaaagaccataggccacagccgccagtcctctgatagcagcgttgatcgc
tttgtcgccaaagaggaagtggtggagccaggagacctagaaaataagccttcaaggata
aagggggatattggacactacacggacgatgattctgaaccccttgttcactgcgtgcgt
ctgttatctgcttccttcctgctgactggacagaagggggccatggttccagaccgggcg
gtgcgggtcagtgtgaaggcgctggcgctgagctgtgtcggagccgctgtcgctctgcac
ccagaagctttcttcagcaggctttacaaactgcagccagagagtttagaccatccagaa
atgcaatatgtgtccgatatcctgagctacatcgatcatggagatcctcaggttagagga
gccacgtcccttctgtgcggcaccattgtctactccatactcaacaagtcccgatacaat
gcagagcattgggtgactgtcgttaagaaccgcacaggaaataacttttctctggaagat
tgcattccgttattgcaaaaatcccttaaagatgaatcgtcagtgacatgcaagatggct
tgtgcagcggtcaggcactgcatatccagtttatgttgtagtacatacagcgagctcggt
ttacagttgatggtagatctgctcacacttaagaacagttcctactggctggtgaggacg
gagctcttggaaacgcttgcggaaatagatttccggctggtcagcttcttggaaggccga
gcagacggagaacatagaggcgtccattcttacactgggttgctgcatcttcaggagcga
gtattaaatgaagtcatcataagccttctaggagatgaagatgctcgagtgagacacgtc
gccgcagcctcattagctcggtcagttccaaagtttttttacagctgcgatcaaggtcag
gccgatcctgtggtagccgccgctcgagaccagagtagtgtttacctgaagctcctcatg
cacgagactcagccggcatctcacttttatgtcagtaccatcaccaggatctacagaggg
tacaatatcgttcagggtccgacagatgtcagtatggagaataacttgtccaaggtgatc
acggcagtctcccatgcattaaccacatcgaccacacgagcccttacgtttggttgctgt
gaagctctatgtctgctgtcactgcagtttccagtatgtacatggagtgttggctggcat
tgtgggtacatcatatcctctggtgcccaggcctcacggatccaggtgtacaagaacaga
ggacggtccttcagcatttcccagcagagtccctccgaggagcctcgtaagagttgtact
gccggcatggccaacatgatcttgtcgctgctgtcgtccgcctggttcccccttgatctc
tctgctcatcaggatgcattgatcctcactggaaacctgttggcagctactgctcctaaa
tcactgaaaaacccatggacccccgaggatgaagctaaccagccaactaacaaacaggag
gagccatggcctgccctcagcgaccgctcaatagtcagtatggtggatcagctgttcatt
cacttactgaaggccatcaacatctgtgctcatgtgattgatgacgtcactcctggcccc
gtagtaaaggcgacactaccatctcttaccaacccgccttctttaagtcccatacgacga
aaaggaaaagataaggaaagtgcagagcaaacagcggtaccattaagcccaaagaaatcc
actgatgccactccagcttctagacagacagatgcttcaggtccagctcaagcaagcaaa
tctcttggcagcttttaccatcttccttcatatttgaaactatacgacgtattgaaagcc
acatacgccaactacaaggtgaccctggaccttcagaataacaatgagaagtttggaagt
ttcctgcgcgctgccctggatgttctgtcacagattttggaacttgctacactaaatgat
attggcaagtgcgttgaagaaatcctgggttatcttaaatcctgtttcagccgtgaaccg
gtgatggcgactgtctgcgtgcagcagctattaaagacgctttttgggactaacttggca
tcacagttcgaggctttatcttctaacccgggtaaatcacaaggcaaggctcagcgcttg
ggctcctctaacctgcgacctggcttgtaccattactgcttcatggcaccctacacgcat
ttcactcaggccctggctgatgcaagtctacgaaatatggttcaagccgaccaagagcag
gacacatcgggatggtttgatgttctccagaaagtttcttcccagctcaagaacagcatt
accaccgttactaagcatcgggctgacaagaatactattcataatcacattcgcctattt
gagcccttggtgatcaaagccttgaagcagtacaccaccactacatcagtgcagcttcag
agacaagtgctcgaccttctagcccaacttgtccagcttcgtgtcaactactgcctgctg
gattctgaccaggtctttattggttttgttctaaagcagtttgagtatatcgaagtgggt
cagttcagggaatcagaagccatcatcccgaatgtattcttcttcctggtactactgtcc
tatgagcgctaccattccaaacagatcattggcattcccaaaatcatccagctgtgtgat
ggcataatggccagtgggagaaaagctgtgacccacgctattccagcactgcagcccata
gtccatgacctatttgtattaaggggagcaaataaagctgatgcaggaaaagagctggag
actcagaaggaagttgtggtgtcaatgctgctccgactgatccagtatcatcaggtactg
gagatgttcatcttggtgctgcagcagtgccacaaggagaatgaagataagtggaagagg
ttgtcccgacagatagctgacgttatcttacccatgttggcaaagcagcagatgcacata
gactctcacgaagcactgggggtgttgaatagtttattcgaaacattggccccttcggcc
ctacgtcctgtagacatgctgttgagaagtatgttcgtcattccgtacactatggcctcc
gtgagcaccgtccagttatggatctctggcatcctggcgattctccgtgtccttatctca
cagtccacagaggacattgtcctgtcccggatccaggagctgtccttctcacctctcctg
atatcatgtcagaacatcactcgattgagggacaatacccatcaaaactcagaagaagat
gctgagctgaaccagatcacagttcctccagaggaaaccttttcacgcttcctgttacag
ctggtgggaatactcctggaggatatagtgcacaaggagctgaaggtggacatgagtgaa
cagcagcatacgttttactgccagcagctgggaaccctcctcatgtgcctggtccacatc
ttcaaatctggaactttccgaagaatcacgagtgctgccacgagactgttcaagggcagc
ggcgacaatggcaccttctacacgctggagagcctgagtgacctggtggagtccatgttt
cccacccatccttctctagttcttctctggtgtcagtttctgctgctgattgactacacg
aactacagctggtggtcagaagtccaccagaccctcaagagaaacaacctgtccagcacc
aaactgttgctgagccctcagatatctacagacagcgaggaggcagagccgcagtccaag
ctgggcatgtgtaaccgggagatagtccgccggggggccctcatcctgttctgtgactat
gtgtgtcagaacttgcacgattcggagcatctgacctggctgatcgtgaaccatgtgcag
gatctgatctacttatcccatgagcccccggtgcaggacttcattagtgcgatacacagg
aactccgctgccagcggcctcttcatccaagccatccagtcccgctgtgagaacttggcc
accccgacctccctgaagaagacgctgcagtgtctggaaggcattcatcttagccagtct
ggtgcagtgttaacactgtatatcgacaagctcctgtgcaccccgttccgtgtgctggcc
cgcatggtggacacgctggcgtgtcgtcgggtcgaaatgctgctggctgctactccacag
aatagcatgtgtcagctacctgtagaagagctggacaggatgcaggagtatctgcagagc
agtgcattagctcaaaggcaccaaagactttattctctgctggacagatttcggtcaact
gtagcaccagaaacaatcagcccattacctctagtgacctctcacccgctggacggggaa
aatcctccacagctggagaccttggaacctgatgaggcttggtacgtgtctctggtccgc
tcgcagtgttatacacactccgattctgcactgctggaaggagcagaattggtgaatagg
atccctccctcagagcgtctctccttcatgaccagcaaggagtttaatttgagcctactt
gccccctgcttgtcgctgggagtgaaccaaatgttaggggatcagaacagcactttcttt
gaaaccacaaggtctgtggtcctggatctcatctcgcagactgttcagcagcttccagcc
actcatcagctctttcagcctctgcagcccatggatgggagctcctactgggagaagctt
agcctggtgttaggtgatgctgaagtctactactcccttgtcaccctctgtcgagcgctg
gcgcagtttttgctgtctctcccgaaaatacctccatccctgcatataactccagagaag
gaagcggacgttgtgaagtttgtggtgatgtcggtggaggcggtgtcctggcatctcgtc
catgaacagatcccgttgagcgtggatctccaggcagtactggattgctgctgtctgacc
ctccagcagcccgtcctgtggaatctgctggcctctgcagagtacatgacacacgcctgt
tcactcatcagctgcacacgcttcattatagaggccgttgcagtcaaacctggggagcaa
ctactgagccctgaaaggaaaaaaaacaatttagatgatgagaccgcggcagatgaggcg
gaatcggacacaacaggcgcagcatttgtcaggaccgcctgcgtgatgatgtctgagatg
gtggattccctgcagaccgttctgttatttgggcacaagagaaatgttaacatagcggca
ttcctgacgccggtcttcagaaatataatcatcagcctggcccgattacctatagtcaac
agctatacaagagtacccccactggtgtggaagctgggctggtcccctaaaacaggagga
gaattcggaacatcactccccgagatccctgttgagttcttgcaagaaaaggaagtgttt
aaagaattcatctaccgcataaacacactgggatggacgagccggactcagtttgaggag
acgtgggccactctgctcggcgtgctggtgactcagcccattgtaatggaccaagaagaa
agtcagcaagaggaggacacagaaagaactcaaataaatgtcctggcggtccaagccatc
acatcgcttgtgctgagcgctatgaccattccatccgccggcaacccagccatcagtgcc
ctggagcaacagccgcggaacaaggccctaaaagcgctcgacaccagatttggacggaag
ctgagcgttgttagaggaatcgtggagcaggaaatccaagcaatggtatcgaaaagggac
aatatcgccacccaccacgcgtatcaagcttgggaccctgtgccctgtttatctgcagca
accacaggtgctctgatcagtcacgagaagctgttactgcagatcaatacagaacgtgag
atcgggagcatgcgctataagctcggccaagtctctatccattctgtctggctgggaaat
aacattacgcctcttagacaagaggagctcgacgaagaagaggaagatgagagtgatgtc
ccagccccatcttcaccaccaacttctcctataaactccagaaaacatcgcgctggtgtg
gacatacattcctgctcacaatttcttctcgagctctacagccagtgggttctaccttct
aatacaggcaagaagaccccagtcatcctgataagtgaggtggtgagatcgttactggca
gtgtctgatctgttcaccgagagaaatcagtttgagatgatgtacacggctttaaccgag
ctccataaacagcacccgtgtgaggatgaaattctcatccagtatctagtgcctgcaatc
tgcaaagctgccgccgtgctgggaatggacaaggctatagcggagccagtcagccgcctc
ctggagtccacactgcggagcactcacatgcccagccgcatcggagcgctgcacggtgtc
ctttacgtgctggagtgcgacctgctggatgacacggccaaacagctcattcctatcatc
agtgactatctactctccaatctaaggggcattgcacactgtgtcaatctccataatcgg
cagcacgttctggtcatgtgcgcagccgcattctatatgatagaaaactaccccctggat
gttgggccggagttcactgcaggcatcatacagatgtgtggtgtgatggtgtccgggagt
gatgaatccaccccatccatgatctaccactgtgtcctgaggggtctggagcgtctccta
ctctctgagcagctctctaggttggatggggaagcactggtgaaactgagcgtggacaga
gtcaatatgcacagtcctcacagagccatgactgctttaggcctgatgctgacctgcatg
tacacaggaaaagagaagttcagcccaggacgcacggcagagccaagtcctgcagcaccc
gacagcgagtccgtcatcgtagccatggagcgggtgtctgtgctgtttgacaggatacgg
aaaggattcccatttgaggccagagtggtggcaagaatcctcccgcagttcttggatgat
ttcttcccacctcaggacgtgatgaacaaggtcatcggggagtttttatccaaccagcag
ccctacccgcagttcatggccaccgttgtttacaaggtgtttcagacgctacacgccaca
ggacagtcctctatggtgcgcgactgggtcatgttatccctctcgaacttcacgcagagg
acgccggtcgccatggcaatgtggagcctctcctgcttcttcgtcagcgcttcaaccagc
aagtggatctctgcaattttaccgcacgtgatcagcagaatgggcaaatcggagcccgtg
gacatcaacctgttctgcttagtggccatagacttttacaagcatcagatagatgaagaa
ctggaccgcagagcctttcagtcggtgtttgagctggtggcggcccccgggagcccctat
cacagtctgttgacgtgcttacagaatgtgcacaaggttaccgtcttctaa
DBGET
integrated database retrieval system
