Bufo gargarizans (Asiatic toad): 122939894
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Entry
122939894 CDS
T07965
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122939894 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bgar04990
]
122939894 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
bgar04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122939894 (PDLIM1)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
122939894
NCBI-ProteinID:
XP_044152021
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Position
6:complement(270967881..271047543)
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AA seq
407 aa
AA seq
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MTTKRITLKGPAPWGFRLVGGKDFDQPLTISRVNPGSKAALADICSGDVVTAIDGENTDG
MTHLEAQNKIKGCEDELCLLINRIESKIWSPLVTEEGKANPYKMNLASNPQRPVKFQRAF
SMTYQPLKSPTDSISPVSPSAMFKAPLASVYNPLQSRGAPGSLLRRHSTSSIPNQVRVVP
EELKQAAQICPTSPVEVDVPGLKVTHIQFNSPLQLYSQENIMDTLQGQISSINPTYSSIG
QPQPTGTQAIDKDSEVYKMLQENQEANEPPRQSASFLVLQEILETDETDFEGTEIAYTGP
ASNHVIDQGEKPSGFRSVRAPTTKVAASIGSGQKLPICDHCGNGIVGIFVKIRDKPRHPE
CYVCCDCGMNLKQKGHFFVEDKMYCEKHARERMTPPEGYEVVAVFPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaagcgcatcactctaaaagggccagcgccttggggattcaggctggtggga
ggaaaagactttgatcaacctttaaccatctctagggtgaacccagggagcaaggctgca
ttggctgatatatgtagtggagatgttgtgacagctattgatggagaaaacacagatggg
atgactcatttagaagcacaaaataaaatcaaaggctgtgaagatgaactctgcctcctg
ataaacaggatcgagtctaaaatatggtcgcctcttgtaacggaagaaggcaaagcaaac
ccatataagatgaatttggcatcaaatcctcagagacctgtcaaatttcagcgtgctttc
agcatgacttaccagccactaaaatcgccaacagactccatcagtcctgtttctccttct
gccatgtttaaagctcctttggcttctgtctataaccctcttcaatcacgtggtgcccct
ggctctttgctaaggaggcacagcacctcctctatcccaaaccaagtgcgagtggtaccc
gaagagttaaaacaagctgcacagatctgtcccaccagccctgtggaggtggatgttccc
ggactcaaagtcacccacatccagtttaactccccattacagctctattcccaggaaaac
attatggatacattgcaggggcagatctcttccattaacccaacttactccagcattggg
cagccgcagccaaccggtactcaggccattgacaaggattctgaggtttacaagatgctg
caggagaaccaagaggccaatgaaccaccgagacaatcagcttccttcctggtactgcag
gagattttagagaccgacgagacagattttgagggcacagaaattgcatacacaggtcct
gcaagtaaccatgttatagatcaaggggagaaaccttctgggttccgtagtgtaagagct
cctactaccaaagtggctgcctcaatcggcagtggacagaaactgcccatatgtgatcac
tgtggaaatgggattgtgggtatctttgtgaagatccgggacaagcctcgtcaccccgaa
tgctacgtgtgctgtgactgtggaatgaatctcaaacagaaggggcacttttttgtagag
gataagatgtactgtgaaaagcatgcccgggaacgtatgacaccgcctgaaggatacgaa
gtggtggcagtgtttccaaaataa
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