Bufo gargarizans (Asiatic toad): 122940020 Help Entry 122940020         CDS       T07965                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism bgar  Bufo gargarizans (Asiatic toad) Pathway bgar04510   Focal adhesion bgar04512   ECM-receptor interaction bgar04518   Integrin signaling bgar04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bgar00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122940020 (COL1A1)    04518 Integrin signaling     122940020 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122940020 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     122940020 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bgar00536]     122940020 (COL1A1) Glycosaminoglycan binding proteins [BR:bgar00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122940020 (COL1A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  122940020 NCBI-ProteinID:  XP_044152252 LinkDB All DBs Position 6 Genome browser AA seq 1442 aa AA seqDB search MFSFVDTRLLLVIAATILAAKCQGEDDASNSECIHRGTYYGDREVWKPEPCLICVCDHGN VLCDNVTCEESDVPCTNSEVPFGECCAVCHDYDVPQSQVEGPKGETGLQGERGPPGPPGR DGIPGQPGLPGPPGPAGLGSGNFASQMSYGYDEKSAGISMPGPMGPMGPRGPPGPSGSPG PQGFQGPPGEPGEPGASGAMGPRGPPGPPGKNGEDGEAGKPGRPGERGPSGPQGARGLPG TAGLPGMKGHRGFNGLDGAKGDTGPAGPKGEPGAAGENGAPGQAGPRGLPGERGRPGPSG PAGARGNDGAPGAAGPPGPTGPSGSPGFPGGVGPKGDAGPQGSRGSDGPQGARGEPGSPG PAGASGPAGNPGTDGQPGAKGATGAPGIAGAPGFPGARGAPGPQGPGGAPGPKGNNGEPG ASGNKGEPGAKGEPGPAGVQGPPGPSGEEGKRGSRGEPGPAGGPGPAGERGAPGSRGFPG ADGASGPKGPPGERGSVGPAGPKGSAGESGRPGEPGLPGAKGLTGSPGSPGPDGKTGPAG APGQDGRPGPPGPPGARGQSGVMGFPGPKGAAGEPGKSGERGVAGPPGAVGASGKDGEVG AQGPPGPSGPAGERGEQGPAGAPGFQGLPGSPGAPGESGKPGEQGVPGDVGPSGPAGPRG ERGFPGERGAQGPPGPQGPRGSNGAPGNDGAKGEAGAPGSPGGQGPAGLQGMPGERGSAG LPGAKGDRGDQGTKGSDGAPGKDGVRGLTGPIGPPGPGGAPGDKGEAGPAGPSGPTGARG APGERGETGPPGPAGFAGPPGADGQPGAKGEQGDTGPKGDAGPPGPAGPTGAPGPAGAIG APGAKGARGTAGPPGATGFPGAAGRVGPPGPSGNAGPPGPSGPSGKEGQKGPRGETGPAG RSGEPGAAGPPGPPGEKGSPGSDGPAGAPGIPGPQGIAGTRGTVGLPGQRGERGFPGLPG PNGEPGKQGPGGPSGERGPPGPSGPPGLAGPPGESGREGSPGNEGAPGRDGSAGAKGDRG ESGPAGPPGAPGAPGAPGPAGPAGKNGDRGETGPAGPAGPAGPAGVRGPSGPQGARGDKG EAGEQGERGMKGHRGFNGIPGQPGPPGHSGEQGPSGASGPAGPRGPPGASGNPGKDGANG LPGPVGPPGPRGRTGDVGPAGPPGPAGAPGPPGPPSGGFDFSFMPQPPQEKSHYRADDAN VMRDRDLEVDTTLKSLSKQIENIRSPEGTRKNPARTCRDLKMCHSDWKSGEYWIDPNQGC TLDAIKVFCNMETGETCVYPTQSTVPQKNWYTSMNARDKKHVWFGETMSEGFQFEYGSEG SDPADVAIQLTFLRLMATEASQNITYHCKNSVAYMDQETGNLKKALLLQGSNEIEIRAEG NSRFTYSVTEDGCTQHTGEWDKTVIAYQTSKTSRLPIIDVAPMDIGAADQEFGIEIGPVC FV NT seq 4329 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatacaagactactgctagtcatagcagcaaccatcctagcagca aaatgtcaaggagaagatgatgccagcaattctgaatgtatccatcgaggtacttattat ggtgacagagaagtatggaaacctgaaccctgcttgatctgcgtatgcgaccacggaaat gttctttgtgataatgtgacgtgtgaagagtcagatgtcccctgcacaaattcagaagtc ccattcggagaatgctgtgcagtttgccatgactatgacgtcccacaatctcaagttgag ggtcccaagggagagaccggactacaaggagagaggggcccacctggcccacctggcaga gatggcattcctggacaacctggactcccaggtccccctggtccagctggccttggcagc ggaaactttgcttctcaaatgtcttatggttatgatgagaaatctgctggtatctccatg cctggcccaatgggtccaatgggtccccgtggtccccctggtccttctggctcacctgga cctcaaggtttccaaggaccccctggtgaacccggtgaacctggtgcttctggtgctatg ggaccccgtggacccccaggacctccaggaaagaacggtgaagatggtgaagctggcaaa cctggccgccctggtgagcgtggaccctcaggcccacagggtgctcgtggtcttccagga actgctggtcttccaggaatgaagggacacagaggtttcaacggtcttgatggtgccaag ggtgatactggtcctgctggccctaagggagaacctggtgccgctggtgagaatggagct cccggacaagcgggtcctcgtggtctccctggtgagagaggtcgccctggcccctctggc ccagctggtgctcgtggtaatgatggcgctcctggtgctgctggtcctcctggtcccact ggcccaagtggatcccctggattccctggtggtgttggccccaagggtgatgctggtccc caaggatctcggggttctgatggtccacaaggtgctcgtggtgaacctggttctcctggc ccagctggtgcttctggccctgctggaaaccctggtactgatggtcaacctggtgccaaa ggtgccactggtgctcctggtattgctggtgctcctggtttccctggtgcccgtggtgct cccggacctcagggccctggtggtgctcctggtcccaaaggtaacaatggagaacctggt gcctctggaaacaagggcgagcctggtgctaaaggagaacctggccccgctggtgttcaa ggacccccaggtccctctggtgaagaaggaaagagaggatcccgtggagaacccggacct gctggaggtcctggacctgctggcgaacgtggtgcccctggtagccgtggtttccctggt gctgatggtgcttctggacccaagggtccccctggtgagcgtggttccgtcggccctgct ggtcccaaaggatctgctggtgaatctggtcgccctggtgagcctggtcttcccggtgct aagggtctaactggtagccctggtagccctggccctgatggcaagactggccctgctgga gcccctggtcaagatggtcgccctggacctcctggcccacctggtgctagaggccagtct ggtgtaatgggattccctggacctaaaggcgctgctggtgagcctggaaagtctggtgag agaggtgttgctggtcctcctggtgcagttggtgcctctggcaaagatggtgaagttggt gctcaaggtccccctggcccttctggccccgctggagagagaggagaacaaggccccgct ggtgctcctggattccaaggtcttcccggatctccaggtgctcctggtgagagtggcaag cccggtgaacagggtgttcctggagatgttggtccttccggtcctgctggcccaagaggt gaaagaggtttccctggtgaacgtggtgctcaaggtcctcctggccctcagggaccccgt ggttctaatggagctcctggtaacgatggtgctaagggtgaagctggtgctccaggttct cctggtggtcaaggacctgctggtcttcaaggaatgcccggtgagcgtggttctgcaggt ctgcctggtgctaagggtgacagaggtgatcaaggaactaaaggaagcgatggtgcccct ggtaaagatggagttagaggtctgactggccccattggtccacctggcccaggtggtgct cctggtgacaaaggtgaagctggtcctgctggcccttctggccccactggtgcccgtggt gctcccggtgaacgtggtgagactggtcctcctggccctgctggattcgctggtcctcct ggtgctgatggtcaacctggtgccaagggtgaacagggagatactggtcccaaaggtgat gctggtcctccaggccctgctggtcccactggtgctcccggccctgctggtgcaattggt gctcctggtgccaaaggtgctcgtggtactgctggacctcctggtgctactggtttccct ggtgctgctggacgtgttggaccccctggcccctctggcaatgctggacctcccggccca tcaggcccctctggaaaggaaggacaaaaaggaccccgtggtgagactggcccagctgga cgttctggtgaacctggagctgctggacctcctggacctcctggcgagaaaggttctcct ggtagcgatggccctgctggtgcccctggtattcccggacctcaaggtattgctggaacc cgtggtaccgttggtcttccaggacagagaggagaaagaggtttccctggtcttcctgga cccaatggtgaacctggcaaacaaggtccaggtggtccaagtggtgaacgtggtccccca ggtccttctggcccaccaggcttagctggacctcctggtgaatctggtcgtgaaggctct cctggaaatgaaggtgcccctggtcgtgacggttctgctggagccaagggtgaccgtggt gagtctggacctgctggtcctcctggcgctcctggtgcccctggtgctcctggcccagct ggccctgctggaaagaatggcgatcgtggtgagactggtcccgctggtcctgctggtccc gctggccctgctggtgttcgtggtccttctggaccccaaggcgcacgtggagacaagggt gaggctggtgaacaaggagaaagaggcatgaagggacacagaggattcaacggtattcca ggacaacctggtccacctggacactctggtgaacaaggtccttctggagctagcggtccc gctggtccaagaggtccacctggagcttctggcaaccctggaaaggatggtgctaatggt ctgcctggtcccgttggtcctcctggtccacgtggtcgtactggtgatgttggtcctgct ggtccccctggacctgctggtgcccctggtcctcctggccccccaagtggtggatttgat ttcagcttcatgccccagccacctcaggagaaatctcactaccgtgctgatgatgccaac gttatgcgtgaccgagatcttgaggtagacaccaccctaaagagcctcagcaaacagatt gaaaacatccgcagtccagagggtaccagaaagaaccctgcccgcacctgccgtgacctg aagatgtgccattctgactggaagagcggtgaatactggattgaccccaaccaaggctgc actcttgatgccatcaaggtcttctgcaacatggagactggagagacctgtgtgtatccc actcaatccacagttccacaaaagaactggtacactagcatgaacgcacgtgataagaag catgtctggttcggagagacaatgagtgaaggattccagtttgaatacggcagcgaggga tctgacccagctgatgttgccatccaacttaccttcctccgtctcatggccactgaagct tctcagaacatcacctaccactgcaagaacagcgtggcttacatggaccaagaaactggc aacctaaagaaggcccttctcctccaaggctccaacgaaattgaaatcagagcagagggc aacagccgcttcacatacagtgtcacagaggatggttgcacgcaacacacaggagaatgg gacaagaccgtcattgcataccagacatcaaagacatcacgtctgcccatcattgatgtt gcacccatggatattggagctgccgaccaggaattcggaattgagatcgggccagtctgc ttcgtgtaa

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