Bufo gargarizans (Asiatic toad): 122940093
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Entry
122940093 CDS
T07965
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgar03009
]
122940093 (DDX21)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122940093 (DDX21)
Enzymes [BR:
bgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122940093 (DDX21)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
Pre-60S particles
Helicases
122940093 (DDX21)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122940093 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
CMS1
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
122940093
NCBI-ProteinID:
XP_044152375
LinkDB
All DBs
Position
6:288020780..288046660
Genome browser
AA seq
764 aa
AA seq
DB search
MPGLLQTGEMESGVGKKKKVSETPTTKKMKRKIHNGETEEPDFEQVSNINEEVTEDCNNN
KQTPKQKKKKLAKKESSPEAAEQIDEEQEVTEAPKVKKSKKKTPKIEQEESEQQNTAESE
PQINGKKSGKKSKAKKTSTTENGEVQSTNNDAPQAKKRKTEPEAEANAEETKSDDEETAL
EKKEGDFSNYPISEETITNLKAKGVTYLFPIQAKTFHTAYSGKDVVVQARTGTGKTFSFA
IPLIEKLIQDKSPLVQGRPPRVLILTPTRELAIQITNEVRSISKKLKTCCFYGGSPYQQQ
VFAIKTGIDILVGTPGRIRDLIQNYKLNLTILKHVVLDEVDMMFDMGFSEQVEEILSARY
KSDPDDNPQTLLFSATCPDWMYNVAKKYMKKVYEKIDLVGHRSQRAAITVEHLAIECNRF
QKSVVLGDVIQVYSGSHGKTIVFCDSKLEAHELSTNCASLKQTAKALHGDLQQKEREVIL
KGFRSGSFNILIATNVAARGLDIPEVDLVVLYSAPKEADSYVHRSGRTGRAGRTGICISL
YESRDRYYLNNVERSTGITFKKVGIPSILNVAKSSSADAIKSLDSVSADVIEQFKTYAEE
LIEKKGAVNALAAALAHISGASSLKQRSLLNMEPGFVTVLLESSVAIHTLSYVWRSIKEQ
MGEDIDSKIHRMCPLKNLMGACFDVKPETLKEMQDAWGSSRRWKLSVATELPELQESRSD
MEGSRGRGFGGRGGGGRSFDRRRGGNNRNSSQRGGNRRGGFRRR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccgggattacttcaaaccggagaaatggagagcggagtcggcaagaagaagaaagta
tctgaaactcccacaaccaagaagatgaaaagaaaaatccacaatggggaaacagaagaa
cctgactttgagcaagtgtctaatatcaatgaagaggtgaccgaagactgtaataacaat
aaacagacaccgaaacagaagaaaaagaagcttgccaaaaaagagagttctcctgaagca
gctgagcagatagacgaggagcaggaagtcaccgaagctcctaaagtcaagaaatcaaag
aagaaaacgccaaaaatcgagcaggaagaatcagaacagcaaaacacagcagaatccgaa
ccacagatcaacggcaaaaagagtggtaaaaaatccaaagcaaagaaaacctcaacgact
gagaatggagaagtacaatccacaaataacgatgccccacaagcaaagaaaaggaaaacg
gagcccgaggcagaggcgaacgcggaggaaaccaaatcggatgatgaggagaccgccttg
gaaaaaaaggaaggcgacttttctaattatcctattagtgaagaaaccattacaaatcta
aaagcaaaaggagtgacttacctgtttcctattcaagccaaaaccttccatactgcttac
agtggtaaagatgttgtagtccaggctcgcactggtactggcaaaaccttctcatttgca
atccctctgattgaaaaactaatccaggacaaatccccattggtgcaaggacgacccccc
agggtgcttatcctcacacccaccagagaactggcaatccagataacaaatgaagttcgc
agcatctctaaaaagctgaagacctgttgtttctatggagggtctccttaccagcagcaa
gtatttgccataaaaactgggatcgatatcctggtggggactcctggccgtataagagat
ctcatccagaactacaagctgaatctgaccattctgaaacacgtggtcttggatgaagta
gacatgatgtttgacatggggttttctgagcaagttgaagaaatattatctgctcgttat
aaatctgatccagatgataatcctcagacccttctcttctctgcgacctgccccgattgg
atgtataatgttgctaagaaatacatgaaaaaagtttatgaaaaaatcgaccttgttgga
caccgtagtcagagggctgccatcactgtggagcacttggccattgagtgtaacagattc
cagaaatcagtcgtccttggtgatgtcatccaggtgtacagtggaagccatggaaaaaca
attgtcttctgtgactccaagttggaagctcacgaattgtcaacaaactgcgcctcatta
aagcagaccgccaaagcattacatggagatcttcagcaaaaggagagggaagtcatcttg
aaaggctttagaagtggctcttttaatattttaattgcaaccaatgtcgctgcccgtggt
ctagacattccagaagtcgatcttgttgtgttatattctgcaccaaaggaagcagattct
tacgtccaccgttcgggacgcacgggcagagcaggacgcacaggaatctgcatttccctt
tatgaatccagagacagatattacttgaacaatgttgagagaagtacggggatcaccttc
aagaaagtcggaattccatccatattgaatgtggccaagtcatccagtgctgatgccatc
aagtcattggactctgtctcggctgatgtcattgaacagtttaaaacatacgcagaggag
ctcatcgaaaagaaaggggctgtcaatgcattggcagcagcgttggctcatatttctggg
gcttcatccctgaagcagcgatcacttcttaacatggagccgggctttgttacagtgcta
ttggagagttcagtggccatccacaccctttcttatgtttggcgttccattaaagagcaa
atgggagaagatattgattcaaaaatacacagaatgtgcccactaaagaacctcatggga
gcgtgttttgatgtaaagccagaaactcttaaggaaatgcaggacgcctggggcagctca
agacgctggaagctttcagtcgcaacagaattacccgaacttcaggagtcaaggagtgac
atggaaggctcccgcggcagaggttttggaggcagaggaggaggaggaagatcttttgac
agaagacgtggcggcaataacaggaattcatcccagagaggaggaaacagacgtggaggc
tttagaaggcgctga
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