Bufo gargarizans (Asiatic toad): 122940100
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Entry
122940100 CDS
T07965
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122940100 (RBM39)
Spliceosome [BR:
bgar03041
]
Common components
Common spliceosomal components
General mRNP proteins
122940100 (RBM39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
122940100
NCBI-ProteinID:
XP_044152387
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Position
6:complement(97360209..97407227)
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AA seq
540 aa
AA seq
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MADDIDIEAMLEAPYRKDENKLNSANGHEERSKKRKKSKSRSRSRERKRSKSREKKRSRE
RERKRSKSREKKRSRSKERKRSRSRSKDRRFRGRYRSPYSGPKFGSSMRGKMGVPHNVKL
RRRSKSKSPQKKEKSPVRGPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRD
VRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN
LQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDS
ECAKKALEQLNGFELAGRPMKVGHVTERTDASNASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQSRISQQSEALAAAAAAASAAAITLSSS
TLPVPAATQPLATQCFQLSNMFNPQTEDEQGWDTEIKDDVIEECNKHGGVVHIYVDKNSP
QGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTSTQLLFPVRR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacattgatatagaagcgatgctggaagcgccctaccggaaggacgagaac
aaactgaacagtgccaatggacatgaagagcgcagcaagaagagaaagaaaagtaaaagt
cggagtcgcagccgtgaaagaaagcgtagcaagagcagggagaagaaacgcagcagggag
cgggaaaggaaaagaagtaaaagcagagaaaaaaagcgcagtcgcagtaaagaacgcaag
aggagtcggtcaagaagcaaagatcggagatttagaggccgttatcgaagtccatattct
ggaccaaaatttggaagctccatgcgaggcaaaatgggagtaccgcacaacgtgaagcta
aggcgtcgttcaaagagcaaaagtccacaaaagaaagagaaaagccctgtaagaggtcca
attgataatttaacaccggaagaaagagatgcacgcactgtcttttgtatgcaactggca
gcaagaatccgccccagagacctcgaagaatttttctctacggttggcaaggttcgtgat
gtgaggatgatatccgaccgaaattccaggcgttctaaagggatagcttatgtcgagttt
gttgatgttagctctgtacctctagcaattggtttaacaggacagagagttttgggtgtt
cccataatagtgcaggcatctcaggcagaaaagaacagagctgctgcaatggctaataat
ttacagaaaggcactgcaggaccgatgaggttatatgttggatctctgcattttaacata
actgaagacatgctgcgaggaatatttgaaccatttggcagaattgagagtattcagctt
atgatggacagcgaaactggccgctcaaagggatatggctttattactttttcggattca
gaatgtgccaaaaaagctctggagcagttaaatggatttgaattggctgggcgtcctatg
aaggttggccatgtgacagagcgtactgatgcttcaaatgccagttcatttttggatagt
gatgagctcgagagaactggaatcgatcttggtactactggtagacttcagctgatggca
aggcttgcagaaggcacaggattgcagatacccccagctgcccagcaagctttgcagatg
agtggctctttggcttttggtgctgttgcagatcttcagtcaagaatttcacaacaaagt
gaagctcttgctgctgctgccgccgctgcctctgctgctgcaatcacgttgtcatcctcc
actttaccagttccagcagccactcaaccacttgccactcaatgcttccagctgtcaaac
atgtttaacccacaaacggaagatgagcaaggttgggacacagaaataaaagatgatgta
attgaagaatgcaacaaacacggaggagttgttcacatttatgtagacaaaaattcacca
cagggtaatgtttatgttaaatgtccaaccatagcatctgcaattgcagcggtcaatgct
ttgcatggaaggtggtttgctggcaagatgattactgctgcgtatgtccctcttccaaca
taccacagcctcttcccagattccatgacatctactcagctactgtttcctgttcgtcga
tga
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