Bufo gargarizans (Asiatic toad): 122940111
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Entry
122940111 CDS
T07965
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122940111 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122940111 (DHX15)
03009 Ribosome biogenesis [BR:
bgar03009
]
122940111 (DHX15)
Enzymes [BR:
bgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122940111 (DHX15)
Spliceosome [BR:
bgar03041
]
Complex A
U2 snRNP components
U2 related factors
122940111 (DHX15)
Complex B
122940111 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122940111 (DHX15)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
90S particles
Helicases
122940111 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
ResIII
Atrophin-1
Flavi_DEAD
AAA_29
AAA_25
DUF3915
Motif
Other DBs
NCBI-GeneID:
122940111
NCBI-ProteinID:
XP_044152425
LinkDB
All DBs
Position
1:complement(78239016..78296969)
Genome browser
AA seq
760 aa
AA seq
DB search
MSKRHRLDLGEDYATSKKRGEGKDRDRDRDDRSKDRDRDRDRDRERDRDKDKESRSTANT
PFISAGGVQAVKPAALPQGVNPFTNLPHTPRYYEILKKRLLLPVWEYKERFTDILIRNQS
FVLVGETGSGKTTQIPQWCVEYMRSLPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQ
EVGYSIRFEDCSSAKTTLKYMTDGMLLREAMNDPLLERYGVVILDEAHERTLATDILMGV
LKEVVRQRNDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAA
IRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQ
QQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES
LLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLK
KLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMV
IASCDFNCSNEILSITAMLSVPQCFIRPTEVKKAADESKMRFAHIDGDHLTLLNVYHAFK
QNHESSQWSYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVT
GYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKP
EWLVKIAAQYYDMSNFPQCEAKRQLERIIAKFQTKEYSQY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccgactggacctgggcgaggattatgccacgagtaagaagagagga
gaagggaaggaccgggatcgcgatagagatgaccgctcaaaggaccgagatcgtgacaga
gaccgtgatcgcgagcgggatagagacaaagataaagaatctcgtagtacggcgaacact
ccatttatctcagctggtggagtacaggccgtgaagccggcagcacttccccaaggcgtc
aatccatttaccaacttaccccacacaccacggtactatgaaatcctgaagaagcgtctg
ctgttgcctgtctgggagtacaaggaacgttttacagatattctcataaggaaccagtct
tttgtcttggtgggagagacgggttctggaaaaactacacagatccctcagtggtgtgta
gaatacatgaggtcgttacctggtcccaagagagccgttgcctgtacccagcccagaaga
gtggctgccatgagcgtggctcagagagttgccgatgaaatggatgttatgcttggccaa
gaggttggctactctattcgatttgaagactgcagcagtgcgaaaacaactctgaagtac
atgactgatggtatgttactccgagaggcaatgaacgaccccttgttggagcgctatggt
gtagtcatacttgacgaagcccatgaaagaactttagctacagatattttaatgggtgtt
ttaaaagaggttgttcgacaaaggaatgatttaaaggttatagtcatgagcgccactctt
gatgcaggaaagtttcaagtttacttcgatagctgtcctctcctcactattcctggtcgc
acacatcctgtagaaatcttttacactccggagcccgagagagactatctagaagcagcc
attcgtacagtcattcagattcatatgtgtgaagaggaggagggagatcttctgctcttc
cttaccggccaagaggaaattgatgaagcgtgcaaaaggataaaaagagaaattgatgac
ttgggacctgaagttggggatataaagatcatccctctatattctacccttccaccccag
caacagcagagaatatttgaaccccctccacccaagaaacccagtggtgcaataggaagg
aaagttgtggtatccactaacatcgctgagacctcattaaccattgatggtgttgtattt
gtgatcgatcctggatttgctaagcaaaaggtgtacaaccctcgaattcgggtagagtct
cttctggttactgctatcagcaaggcttccgcacagcaaagagcaggtcgtgctggtcgt
accaggcccggcaaatgcttcagactttacacagagaaggcgtataaaacagaaatgcag
gacaacacatacccggagattttgagatccaacttgggttcagtggtgctgcagctgaaa
aagcttggtattgatgacttggtacactttgacttcatggatccaccagcccctgaaaca
ctgatgcgagctttggagttgctaaattaccttgctgccttaaatgatgatggtgatctg
actgaactgggatccatgatggcagagtttcccctcgacccccagcttgccaagatggtc
attgccagttgtgacttcaattgttctaatgagatcctatccataacggctatgttgtca
gtcccacagtgttttattcgacccacggaagtcaagaaagctgcagatgaatccaagatg
aggtttgcccacatagatggcgatcatctgacgctgctgaacgtctaccacgctttcaaa
cagaaccacgagtcgtctcagtggagttatgacaacttcattaactacaggtccctgatg
tctgcagacaatgtacggcagcagctgtcacgaatcatggacaggtttaacttgccacgt
agaagcacagacttcacgagccgggattattacattaatatcagaaaagccctggttacc
ggctattttatgcaggtggcacatttggaaagaaccggccattacctgaccgtgaaagac
aaccaggttgtgcagttgcatccttctacggttctggaccacaagccagagtgggtcctt
tataatgaatttgtccttacaacaaagaattacatccgcacatgcacagacataaagccg
gaatggttggtgaaaattgctgcccagtactacgacatgagcaacttcccacagtgtgaa
gccaagagacagctggaaagaatcattgccaaatttcagacaaaggagtactcccagtac
tga
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