Bufo gargarizans (Asiatic toad): 122940188
Help
Entry
122940188 CDS
T07965
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122940188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122940188
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122940188
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122940188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
GULLO2-like_3rd
Motif
Other DBs
NCBI-GeneID:
122940188
NCBI-ProteinID:
XP_044152559
LinkDB
All DBs
Position
6:complement(389083456..389098544)
Genome browser
AA seq
194 aa
AA seq
DB search
MAPARCCVPGERLCSLEDCAPGYGTYCKHGYVFSSLSGYVTKKTDNGLMPVISVVRDTDS
HLLPDVGSVVTCKVMSINPRFAKVQIMYIGATALKNTFRGTIRKEDIRATEKDKVEVYKS
FRPGDIVVAKVISLGDAQSNYLLTTAENELGVVVAHSEAGATMVPISWCEMQCPKTHMKE
PRKVARVQPEFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgctcggtgttgtgttcccggggagcggctgtgcagcttggaggactgtgcg
ccgggctacgggacttactgcaaacacggctacgtcttctcctcgctgtctggatacgtc
acgaagaagaccgacaatggtttgatgccggtgatctctgtagtgagggacacagactct
catcttctgcctgacgtgggctctgtggtgacctgtaaggtgatgagtattaacccaaga
tttgctaaagtccagatcatgtacatcggtgcgactgcgctcaaaaacacgttcagaggc
acaatcagaaaagaagatatccgtgcaacagagaaagataaggttgaagtttacaaaagc
tttcgaccaggagatatagtggtagcaaaagttatatctttaggagacgcccagtccaat
tatctgttgacaacggcagagaatgaattgggagttgtggtcgcacatagtgaagcaggg
gcaaccatggtgcccatcagctggtgtgagatgcagtgtcccaagactcacatgaaggaa
ccgcggaaggtggcccgagtgcagccggagttcctacagacttaa
DBGET
integrated database retrieval system
