Bufo gargarizans (Asiatic toad): 122940248
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Entry
122940248 CDS
T07965
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122940248 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122940248 (DDX5)
03009 Ribosome biogenesis [BR:
bgar03009
]
122940248 (DDX5)
Enzymes [BR:
bgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122940248 (DDX5)
Spliceosome [BR:
bgar03041
]
Complex A
U1 snRNP components
U1 related factors
122940248 (DDX5)
Complex B
122940248 (DDX5)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
Pre-60S particles
Helicases
122940248 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
122940248
NCBI-ProteinID:
XP_044152720
LinkDB
All DBs
Position
6:complement(7229616..7238427)
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AA seq
604 aa
AA seq
DB search
MPGFNDRGRDRGFGGAPRFGGNRGSGKFGNPGERLVKKKWNLEQLPKFEKNFYQETPEVA
CRTAQDAEQYRRGKEITVRGQNCPKPVLQFHEASFPVTIMEALKRQNFTEPTPIQSQGWP
VALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQPFLQRGDGPILLVLAPTRELAQQVQQV
AAEYGRACRLKSTCIYGGAPKGPQLRDLERGVEICIATPGRLIDFLEAGKTNLNRCTYLV
LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVHINIGALE
LSANHNILQIVDVCNEGEKDDKLVRLMEEIMSEKENKTIVFVETKRRCDELTRRLRRDGW
PAMGIHGDKSQQERDWVLNEFKHGKSPILIATDVASRGLDVEDVKFVINYDYPNSSEDYI
HRIGRTARSTNTGTAYTFFTPNNAKQVGDLIAVLREANQTINPKLLQLVEDRGRFRGGRG
GMNDRRDRFSSGKRGWGDRENYNRGFGAKRDFGNKQNGFGAQSYNNSYTNGYGAAMQGAV
QGAYQRPGQNGAYQNSYDATQQYAAAMQNGMAQQAYTYPAAAAATVTPAAPSMLGYTMPG
AYPQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtttaacgacagaggccgcgatagaggatttggtggcgctccccgctttgga
ggtaacaggggatctggaaagtttggtaacccaggagagcgactcgtgaaaaagaaatgg
aacctggaacagctgccaaaatttgagaagaacttctaccaggagacccctgaagtggcg
tgccgcactgcgcaagatgctgagcagtaccggaggggtaaggagatcaccgtccgtggc
caaaactgccccaagcctgtcctccagttccatgaagcgagcttcccagtcactatcatg
gaggcgctgaagcgccagaacttcactgagcctacccccatccagagccagggctggccg
gtggccctgagcgggttggacatggttggcgttgctatgacagggtctgggaagactctc
tcttacttgcttcccggcattgtccacatcaaccaccagccgttccttcagagaggcgat
ggacccattctcctggtgctggcacctacccgagaattggctcagcaggtgcagcaagtg
gcagcagaatatggcagagcgtgccgcctgaagtccacctgtatctatggaggtgcaccc
aagggaccccagctgagggacctggagagaggtgttgagatttgcattgccacacccgga
cgtctcattgactttttggaagctggaaagactaacctgaacaggtgcacttacctggta
ctggatgaggcagacaggatgcttgacatgggcttcgagcctcagatcaggaagattgtg
gaccagatccggcctgacagacagaccctgatgtggagcgccacatggccaaaggaggtg
cggcagctggcagaagacttcttaaaggactatgttcacataaacattggtgccctggaa
ctgagtgccaaccacaacatcctgcagatcgtggacgtgtgcaacgagggcgagaaggac
gacaagcttgtccgtctgatggaggaaatcatgagcgagaaggagaacaagaccatagtg
tttgtggagacaaagaggcgctgtgatgaactgacccgccgcttacggagagacgggtgg
cctgctatgggcattcatggtgacaaaagccagcaggagcgtgactgggtgttaaatgag
tttaaacacggcaaatcccccatcctcattgccacagacgttgcatcccgaggtctagat
gtggaagatgtgaaatttgtcatcaattatgactaccctaactcctctgaggattatatc
caccgtattgggaggacagcccgcagtaccaacacgggcactgcctataccttcttcacc
cccaacaatgccaaacaagtgggcgatctgatcgctgtgctccgcgaagccaaccagaca
atcaaccccaagctgctccagctggtggaggacagaggacgctttagaggaggcagagga
ggaatgaacgaccgtcgtgaccgcttttcttcaggcaagcggggttggggggatcgggag
aattacaacagagggttcggagctaagagggactttggaaacaagcagaacggctttgga
gcgcagtcgtataataactcctacaccaacggctacggcgcagccatgcagggagcagtc
caaggagcgtaccagcggcccggccagaacggcgcctaccagaacagctatgacgccacc
caacagtacgcagcagccatgcagaacgggatggcccagcaggcatacacctacccagca
gcagcagccgccacagtgactccagcagctccttccatgctaggatacaccatgcccggg
gcttaccctcagtga
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