KEGG   Bufo gargarizans (Asiatic toad): 122940326
Entry
122940326         CDS       T07965                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar03040  Spliceosome
bgar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122940326 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122940326 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bgar03041]
    122940326 (PRPF19)
   04121 Ubiquitin system [BR:bgar04121]
    122940326 (PRPF19)
   03400 DNA repair and recombination proteins [BR:bgar03400]
    122940326 (PRPF19)
Enzymes [BR:bgar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122940326 (PRPF19)
Spliceosome [BR:bgar03041]
 Complex B
  Other components
   Prp19 complex
    122940326 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    122940326 (PRPF19)
Ubiquitin system [BR:bgar04121]
 Ubiquitin ligases (E3)
  U-box type E3
   122940326 (PRPF19)
DNA repair and recombination proteins [BR:bgar03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122940326 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st Prp19 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_IFT140_1st CFAP251_N Beta-prop_EIPR1 NBCH_WD40 Beta-prop_NOL10_N U-box Beta-prop_Vps41 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_DCAF4 ASA1 PEP5_VPS11_N Beta-prop_WDR41 PROPPIN Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 Cytochrom_D1 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 zf-Nse Beta-prop_ACSF4 ATG16
Other DBs
NCBI-GeneID: 122940326
NCBI-ProteinID: XP_044152883
LinkDB
Position
6
AA seq 503 aa
MSLTCFISNEVTDRPCVSPLSGHVFDRRLIEKYLAENGTDPITNQPLSEDQLIDIKVAHP
IRPKPPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGISMQANPTPQVGAAGSAEAMDLGELVGMSSEIIQKLQDKAT
VLTTERKKRGKTVPEDLIKPEELSKYHQVSSHVGLHSASVPGILALDLCPTDTNKTLTGG
ADKSVVVFDAMSQQILATLKGHTKKVTNVVFHPSQELVFSASPDCTIRVWSVPDSTCVQV
LRAHEGAVTGLSLHATGDYLLSCSDDQYWAFSDIHAGRVLTKVTDETSGCALTCAQFHPD
GLIFGTGTMDSQIKIWDLKERSNVANFPGHSGPVSCVAFSENGYYLATAAEDSSVKLWDL
RKLKNFKTLQLEEGYQVRSLVFDQSGTYLAVGGSDIQVYICKQWAEVLHFTDHSALTTGL
AFGQNAKFLASTGMDRSLRFYSL
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgtccctcacatgctttatcagtaatgaggtgacagaccggccttgtgtgtctcccctg
tcgggtcatgtctttgataggcgccttattgagaaatatctggctgaaaatgggacagat
ccaataactaatcaaccactgagtgaagatcagttgattgatattaaagttgctcatcca
attcgtccaaagccaccttctgctacaagtatccctgcgatcctaaagtccctgcaggat
gaatgggatgctgtaatgcttcacagcttcactctaaggcagcagctacagaccactcgc
caagaactttcccatgctctctaccaacatgatgctgcttgtcgtgtcatagcccgtctt
actaaggaagtaacagctgcacgtgaagctctggctacattgaaaccacaagctggtatt
tctatgcaggccaaccctacccctcaagtaggcgcagcaggttcagcagaggctatggac
ttgggagaattggtgggaatgtcatcagaaatcatacagaagcttcaagacaaagcaaca
gtgctcaccacggagcgcaagaagcgaggtaagacagtcccagaagacctcatcaagcca
gaagagctcagcaagtatcatcaagtttcttcacatgtgggcttacatagtgcaagtgtt
cctggcatcttggctttggatttgtgtccaacagacaccaacaaaacccttacaggtggc
gctgataaaagtgttgtggtgtttgatgcaatgtctcagcagatcctggcaactcttaaa
ggtcacaccaaaaaggtcaccaatgttgtgtttcatccttcccaggagttggtgttctct
gcctcacctgactgtacaatacgtgtgtggtctgtgccagactctacttgtgttcaagtt
ttaagagctcatgaaggagctgtgactggtctaagtctgcatgcaactggagactaccta
ttgagctgctcagacgaccagtactgggcattctctgacattcatgcaggacgtgttctc
accaaagtaacagatgagacttctggctgcgctcttacctgtgctcagtttcaccctgat
ggactcatttttggtacagggaccatggattctcaaattaagatctgggatttgaaggaa
cgatcaaatgtggccaattttcctgggcattctggccctgtatcatgtgtggcgttttca
gaaaatgggtattacttggcaactgctgctgaagattccagcgtcaaactgtgggattta
cggaaactaaagaacttcaagaccctgcaattagaagagggataccaggttcgatcactg
gtatttgaccaaagtggtacatatcttgcagttggaggtagcgacatccaagtttatatc
tgcaagcaatgggctgaagttttgcatttcacagatcacagtgcacttacaacaggtctg
gcatttggtcaaaatgcaaagtttctggcatctacaggcatggataggagtctacgtttt
tacagtctttga

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