KEGG   Bufo gargarizans (Asiatic toad): 122940544
Entry
122940544         CDS       T07965                                 
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122940544 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgar03019]
    122940544 (CSTF1)
Messenger RNA biogenesis [BR:bgar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     122940544 (CSTF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta CSTF1_dimer Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_NWD2_C Beta-prop_HPS5 VPS8_N Beta-prop_SPT8 Frtz
Other DBs
NCBI-GeneID: 122940544
NCBI-ProteinID: XP_044153077
LinkDB
Position
6:317503537..317523480
AA seq 431 aa
MYRYKVTLKDRHQLYKLIISQLLYDGYINLANGLVSEIKMNTVCAPSEQLLHLIKVGMEN
DDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPSEQILASGSKDYSLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFIIVGTQHPT
LRLYDVNTFQCFVSCNPQDQHTDAICSVSYNPTANTYVTCSKDGSIKLWDGVSNRCITTY
EKAHDGAEVCSAIFSKNSKYILSNGKDSVAKLWEISTGRMLIKYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtataggtataaggtaactctgaaggatcgccaccagctctacaagctgatcatcagc
cagctgctgtatgacggctacataaaccttgccaatggccttgtcagcgagatcaagatg
aacactgtgtgtgcaccgtccgaacagctgctgcacctcatcaaagtgggcatggagaat
gatgacagcgcagtccagtatgccatcggtcgctctgatactgtggctcctggcactgga
atcgaccttgagtttgatgccgatgttcagactatgtctccggaggcctcggagtatgag
acctgctacgtaacctcacacaagggcccctgtcgtgtagccacctacagcagggatgga
cagctgattgcaactggctctgctgacgcctccataaagatcctggacacggagcgcatg
ctggccaagagcgctatgccaatagaggtcatgatgaacgagaccgcacagcagaacatg
gagaaccaccctgtcatccgcaccctgtatgaccatgttgatgaagtcacatgtttggca
ttccatcccagcgagcagatcctggcctctggctccaaagactacagcctgaagctcttc
gactactcaaaaccatcagccaagcgagccttcaagtacatccaggaagcggaaatgctg
cgctctatctccttccacccgtcaggagacttcatcatagtgggcactcagcaccccacg
ctgcgcctctacgatgtcaacacgttccagtgctttgtttcttgtaacccccaagatcaa
cacacggatgctatctgctctgtcagctacaacccaactgccaatacttacgtcacctgc
agtaaagatggcagcatcaaactgtgggatggggtctccaaccgttgtatcaccacctat
gagaaggcgcatgacggagctgaagtctgctctgccatcttctctaagaactctaagtac
attctgtccaacggaaaggactctgtggcaaagctgtgggagatatctactggccgtatg
ctgatcaagtacacaggtgccggactcagcggcaggcaggtgcacaggacccaggccgta
ttcaaccacaccgaagactatgtcctgctacctgatgaaaggacaatcagcttgtgctgc
tgggattcccgaacggccgagcgccgcaatctcctctccctaggacacaataacattgtc
cgctgcatcgtccattcgcctaccaaccctggatttatgacctgcagcgacgatttccgt
gccaggttctggtaccggcggtcaaccacagactaa

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