Bufo gargarizans (Asiatic toad): 122940587
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Entry
122940587 CDS
T07965
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03013
Nucleocytoplasmic transport
bgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122940587 (CASC3)
03015 mRNA surveillance pathway
122940587 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122940587 (CASC3)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122940587 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
122940587
NCBI-ProteinID:
XP_044153158
LinkDB
All DBs
Position
6:121697042..121734691
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AA seq
690 aa
AA seq
DB search
MADRRRRRRRASQDSEEEGEEESGSDSTGVERAVQPGRTEGRELGNRRVEATTTTTTAAA
VRDGKESECESEDGIEGDAVLTDYESAEESEEEEEARFSEDDALKTTLKSENNASETPAQ
KEEKPKSKGAVTGERQSGDGQESTEPEENKTTTKSQKQLDDDEDRKNPAYIPRKGLFFEH
DLRGHTNDEEVRPKGRHPRKLWKDEGRWEHDRFREDEQAPKSRDELIAMYGYDIRSCKNS
EAIHPRRPRKPRYSSPQREDEDEKPNRPSNRYQESNSAPPPRTYNNRSTPNNGRAPPNRT
YSRPGYKENRPASYPPEDGATPHSTSERRQEYGGYRGRSTEQTPSQPSESSTEVQIKTEP
AADKQVEDPSPPPPDRPVEKKSYSRARRIRVKGGEAGKSIDDTTFPDLPPPPPPQIPTEV
VPVPSPPIPVVKPGGWEPPVEGSVTGLEQDLSQVNISDQNWSPGQSTYIPARGIPNHIHM
AGGPPQYNRLEGMGVQSGRVKRYSSQRQRQVPDPAPMHISLMEGHYYDPLQFQGPVYTHG
ENPPSIPPQGMIVPQEMHLPHPGLHPHPPAAPMSTPNLYPGPVSIPPGQPPPQQLLPPPY
FTAPPSVINFGTPTYPYPPGALPPPPPPTHLYPNTQAQSQVFGGVTYYNPVHQQVQPKPS
PPRRTSQPVTIKPPPPEENRHLKAKEKSSS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggaggcggcggaggagacgtgcgtctcaggatagtgaagaggagggggaa
gaggagtccgggagtgacagtactggggtggagcgggcagtacagcctggtagaaccgaa
ggccgggaactgggtaaccggagagtggaggcgacgacgacgacgacgacggcggcggcg
gtcagagatgggaaggagtctgagtgtgagagtgaggacggtatagaaggagatgctgtg
ctgacggactacgagagtgctgaggagtcagaagaggaagaggaggctcgcttcagtgag
gatgatgcccttaaaaccactttgaaatcggaaaataatgcctctgagacacctgcccaa
aaagaagaaaagcccaagtcaaagggagcagttacaggggagcggcagagtggggatgga
caggagagcacagagccagaggagaataagaccaccacaaagtctcagaaacagctggat
gatgatgaagacaggaagaatccagcctatattcctcgtaaggggctcttctttgaacat
gacttgcgtggacacacaaatgatgaggaagtcaggccaaagggacgccacccccgcaaa
ctgtggaaggatgagggtcggtgggagcatgataggtttcgggaagatgagcaagctccg
aagtctagagatgagctaattgctatgtacggttatgacatccggtcatgtaaaaattct
gaggcgattcacccacgtcgaccaagaaagccaaggtatagcagtcctcagagggaagat
gaagatgaaaagcctaacagaccttcaaaccgttaccaggagtctaattctgctcctcca
ccaagaacctacaacaatcgcagtactcccaataacggcagagccccccctaataggact
tattctcggccaggatacaaagagaatcggcctgccagctaccctcctgaagatggtgct
accccacattctacttcagagagaaggcaagagtatggaggctaccgagggagaagtaca
gagcagactccatcacagcccagtgaaagctccactgaagtgcaaatcaaaaccgaacca
gcagctgacaaacaagtggaagatccatcacctccacctccagatcgacctgtggagaaa
aagtcctactccagagctagacgcattcgggttaaagggggagaagcaggaaagagcata
gatgacacaacattccctgacttgccacctcccccacctcctcagatacctacggaagtg
gttccagtgccctcccctccaatacctgtagtgaaacctggtggctgggagcctcctgta
gaaggtagtgtgacaggactggaacaggacttgtcacaggtcaacatttcagatcaaaat
tggagtccaggacagtcaacgtacatccctgcacgtggaattccaaatcatattcacatg
gctggaggacctccccagtacaaccgcttggaaggaatgggtgttcagagtgggcgtgtt
aaaaggtattcctctcagcgtcagcgacaagtgccagaccctgctcccatgcacatcagc
cttatggaaggacattactatgatccactccaattccagggaccagtatatactcatgga
gaaaatcccccttctattccccctcaagggatgattgtaccgcaagaaatgcaccttcct
catccaggtttgcacccgcacccgcctgctgctccgatgtctaccccaaacctttaccct
ggcccagtttccatcccccctggacagccccctcctcaacagttattaccgccaccttac
tttactgctccccctagtgtcattaattttggaactccaacctacccttatccaccaggt
gctcttccgccaccgccaccaccgacccatttatatcccaatacacaggcccagtcccaa
gtgtttggaggagtaacgtattataaccctgtacaccaacaagttcagccgaagccttca
ccaccacgacgcacatcacaaccagtcactataaaaccaccaccacccgaggaaaacaga
cacttgaaggcaaaagagaagagcagctcctga
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