Bufo gargarizans (Asiatic toad): 122940823
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Entry
122940823 CDS
T07965
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122940823 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgar03021
]
122940823 (TAF5)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122940823 (TAF5)
Transcription machinery [BR:
bgar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122940823 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
122940823 (TAF5)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122940823 (TAF5)
STAGA complex
122940823 (TAF5)
TFTC complex
122940823 (TAF5)
SAGA complex
122940823 (TAF5)
SLIK complex
122940823 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD_LRWD1
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
122940823
NCBI-ProteinID:
XP_044153542
LinkDB
All DBs
Position
6:complement(325578059..325603231)
Genome browser
AA seq
762 aa
AA seq
DB search
MAAPPDEASESVKTEPELLEEVKQETPGCNDSEETALGNGNGVSPKPASPQAAAPAAVTP
QAGSSEAPDRQTLLAVLQFLKKSNLKESADVLLREIGVVDGEDAPSPGQQDGAEQTLLSR
VTAGNSSSAAGGGATSSSGASAGGPVKAPVSSGPQDQPDVSAVLSAYTQQGDPALYEDYY
SGLKRFIESVLDCHRAELSQLFYPLFVHMYLELVYNQHENKAKSFFDKFHGDQECYYEDD
LRILVSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWSIVQEHLY
IDIFDGMPRSKQQIDAMVGSLSGEARREANKVKVFYGLLKEPEIEVPLDDEDEEGENEEG
KPKKKKPKKDSIGSKSKKQDPHAPPQNRIPLPELKDSDKLDKIMIMKEAAKRVRLGPDFL
PSVCFYTFLNAYQGLTALDITDDSSMIAGGFADSTVRVWSLTPKKLRSVKSTSDLNLIDK
ESDDVLERIMDEKTASEVKVLCGHSGPVYATSFSPDRNYLLSSSEDGTVRLWSLQTFTCL
VAYKGHNYPVWDAQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVISTRFHPN
SNYIATGSTDRTVRMWDVLNGNCVRIFTGHKGPIHSLAFTPNGKFLASGATDARVLLWDI
GHGLMVGELKGHTNTIYALRFSRDGEILASGSMDNTVCLWDAIKAFEDLETDDFTSATGH
INLHENSQDLLLGSYMTKSTPVIHLHFTRRNLLLASGAYSPQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgccagatgaggcgagcgagtcggtgaagacggagcccgagctcctggag
gaggtgaagcaggagaccccgggctgcaatgacagcgaggagacggcgctcggcaacggg
aatggagtctctcccaagcccgccagtccccaggcggctgccccggctgccgtcacccct
caggcggggagctcggaggcgccggaccggcagacgctgctcgccgtgctgcagttcctc
aagaaaagtaacctgaaggagtcggcggatgttctgctccgggagatcggcgtcgtggac
ggggaggacgcgccgagccccgggcagcaggacggggcagagcagacgctcctcagccgg
gtgaccgcggggaactcgtcctcagcggccggcgggggagccacctccagcagcggcgcc
agtgcggggggcccggtgaaagctccagtaagtagtggcccccaggatcagccggacgtc
agcgccgttctgtctgcgtacacccagcaaggagatcctgccctgtatgaggactattac
agcggtctgaagagattcatcgagtctgtcctggactgtcaccgtgccgagctgtctcag
ttattctacccgctctttgtacacatgtatctagagctcgtatacaaccagcatgaaaac
aaggcaaagtcattctttgataagtttcatggagatcaggaatgttactatgaagatgat
cttcggattttggtcagcctgactaaaaaagagcatatgaagggaaacgagaccatgctt
gactttcggacaagcaagtttgttctaagaatatcccgagactcctaccagcttctgaag
cgacatctacaggagaggcagaacaatcagatctggagtatagtccaggaacatttgtat
attgatatcttcgatggcatgccacgtagcaagcaacagattgatgcgatggtgggcagc
ctctccggagaggcgagaagagaagccaacaaagtcaaggtgttctatggtcttctaaaa
gagccagagattgaagtgcctttggatgatgaagatgaagaaggggaaaatgaggaaggc
aagccgaagaaaaagaagccaaaaaaagatagtattggctcaaaaagtaaaaagcaagac
cctcatgctcctccacagaataggattcctcttccagagctgaaagattccgacaaactc
gataaaattatgataatgaaggaagctgcaaagcgtgtgcgacttggtcctgacttttta
ccatcagtctgtttctacacattcctcaatgcttatcagggcctgaccgcattggacatt
actgatgactccagcatgattgcaggaggctttgccgattccactgtgcgcgtatggagt
ctgacgcctaaaaaactgcgcagtgtcaaaagcacatctgatcttaatttgattgacaag
gaatcagatgatgttctagagcgaattatggatgagaaaactgccagcgaggtgaaagtt
ttatgtggtcacagtggtcctgtatatgcaactagcttcagcccagacaggaactacttg
ctatccagttcagaagatggcaccgtccggctgtggagcctacagacctttacctgctta
gtggcgtacaaaggtcacaattatcccgtgtgggatgcacagttctcgccatatgggtat
tactttgtttccggaggacatgacagagttgcacgattatgggctactgaccactatcag
cccctacgtatatttgctggccatctggcagatgtgataagtacacgtttccatcccaat
tctaactatatagccactggctccacggacaggacagtcagaatgtgggatgtgctcaat
gggaactgtgtaaggatctttactggacacaagggacctattcactcgctggcctttact
cctaatggaaagtttctagctagcggagctacagatgccagagtcttgctttgggacatt
ggccatggtttaatggttggagagttaaagggtcacaccaacacaatctatgcacttaga
tttagtcgtgatggcgaaattttagcatcaggttcgatggataatacagtttgtttatgg
gatgcaataaaggcttttgaagatttggaaacggatgactttacaagtgctacaggtcat
ataaacttacatgaaaattcccaagacttactgctcggttcttacatgaccaaatccacc
cctgttatccaccttcatttcacaagaagaaacctcctcctggcgtctggagcgtacagc
ccgcagtga
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