Bufo gargarizans (Asiatic toad): 122940939
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Entry
122940939 CDS
T07965
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03250
Viral life cycle - HIV-1
bgar04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122940939 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122940939 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122940939 (SAMHD1)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122940939 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
PDEase_I
SAM_Ste50p
HD_assoc_2
DUF6021
Motif
Other DBs
NCBI-GeneID:
122940939
NCBI-ProteinID:
XP_044153806
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All DBs
Position
6:95446345..95524064
Genome browser
AA seq
625 aa
AA seq
DB search
MSCTKRGRCDDSPTLEDPYVTPEKPAKKPCGEASDNYEAWEVEDVCLFLQQQGLGELQDT
FRENQVTGKTLPYLTEDHLKEMKVSPVGKRLDVARSLHLLCHSYGPEMKVFNDPIHGHIE
LHPLLVHIIDTPQFQRLRYIKQLGGSYYVFPGATHNRFEHSIGVGHLAGCLVRTLHERQP
ELQINERDILCVQIAGLCHDLGHGPFSHMFDGRFMPLACPQKNFKHETASVKMFDHLIES
NQLETIMKRYGLVLPEDLKFIKEQIAGPLPPEDEDCFNSSQNTSWPYEGRQEDKIFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFVKFARVCAVGKKKHICTREKEVGNLY
DMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPHIKIEGSDGKYYTISGSVDDMVAYT
KLTDNILHQILYSNEPELSKARDILRKVERRQLYKYVGQTQPNADSRIKPEEYDKLPADL
ANSTPQYCTSDIRLSPEDFIVDVIHMDYGMKEQNPINNMRFYCKTDLTKAIKITKDQVSQ
LLPEKFAEQIIRVYCKKTDEKSLEVAKRYFVQWCMNRDFSKPQDIDVVAPDMTPLKPSWV
AKEDENSDSEHRVLLQKSRVRLFNN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcaccaagcgcggccgctgcgatgactccccgacgctggaggacccgtatgtc
acccccgagaaaccggcgaagaagccgtgcggggaggcgagcgacaactacgaggcgtgg
gaggtggaggacgtgtgcctgttcttacagcagcaggggctgggggagctgcaggacacc
ttcagagaaaatcaagtaacgggaaaaactcttccgtacctcacagaagaccatctgaaa
gaaatgaaagtcagtcctgtaggaaaaagattggatgtggcccgtagtttacatctgctg
tgtcacagctacggtcccgagatgaaggtcttcaatgatcccatacatggacatattgag
ttacacccgttgttagttcatataatagacactcctcagttccagcgtctgcgatatatc
aaacagcttggaggcagctactatgtgttcccaggagccacccacaatagatttgagcac
tccattggtgttggtcacctggctggatgccttgtacgcaccttacatgaaagacagcca
gagctacaaataaatgagcgagacatcttgtgtgtccagattgcaggcctgtgccatgac
ttgggacatggaccgttttctcatatgtttgatggaagattcatgcctcttgcatgtcca
cagaagaatttcaagcacgagactgcttctgtaaagatgttcgaccaccttattgaatcc
aatcaactggaaaccataatgaaaagatatggcctcgtcttgcctgaagacttaaaattt
attaaggagcagatagccggacctctgcctcctgaagatgaggactgtttcaattctagt
cagaatacatcttggccttatgaaggtcgtcaagaagacaaaatctttctttatgagatt
gtggcgaacaaacgcaatggcattgatgtggataaatgggactactttgccagggactgt
catcatctgggtattcaaaacaactttgattataagcgatttgtcaagtttgcgagagtt
tgtgctgttgggaaaaagaaacacatatgcaccagagagaaggaggttggaaatctgtat
gatatgttccacacacgcaactgcctccatcggcgtgcataccagcataaagttggcaac
atcattgagacaatgattaccgatgctttcttgaaagccgatccacatataaagattgaa
ggatcagatgggaagtactatacaatctctggctcagtggatgacatggttgcctatacc
aagctgacagataatattttgcaccagattttatactccaatgaacccgaactgtccaaa
gcccgagatatactgcgcaaagtagaacgtcggcaactctataagtacgtgggacagact
cagccgaatgcagatagcaggattaagccggaggagtatgacaaactaccagctgacttg
gcaaattccaccccacagtactgtacatcagacatcaggctcagccctgaggattttata
gtggatgtcattcatatggattacggcatgaaagagcaaaatcccatcaacaacatgcga
ttttactgcaagactgatctgaccaaagctataaaaatcaccaaagatcaggtttcacag
cttctcccagagaagtttgcagagcagatcatccgtgtctactgcaagaaaactgatgaa
aagagcttggaggtggctaagagatattttgtgcagtggtgcatgaacagggacttctcc
aaacctcaggacattgatgttgtagccccagatatgactccattgaagcccagctgggtt
gcaaaagaagatgaaaacagtgattcagagcacagagttctcttgcagaaatccagggtc
aggctgttcaacaattaa
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