KEGG   Bufo gargarizans (Asiatic toad): 122940940
Entry
122940940         CDS       T07965                                 
Name
(RefSeq) syndecan 4-B-like
  KO
K16338  syndecan 4
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar04512  ECM-receptor interaction
bgar04514  Cell adhesion molecule (CAM) interaction
bgar04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122940940
   04514 Cell adhesion molecule (CAM) interaction
    122940940
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122940940
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:bgar00535]
    122940940
Proteoglycans [BR:bgar00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   122940940
SSDB
Motif
Pfam: Syndecan C1orf162 HBEGF_C DUF4853 Protocadherin GPT2_C
Other DBs
NCBI-GeneID: 122940940
NCBI-ProteinID: XP_044153807
LinkDB
Position
6
AA seq 195 aa
MNVRLVLFLVGCLLSAAVAESIRETELMDPHTMIGGLLEASGADDEDIYTDNYDDEDSDD
YEGSSGSGDIDEESEDDLESTISTPTVTLGNKILEDDVRKVKDQNEVVQINNDIEVLKET
IPDDQSNQISMASTSHGFFSRTEVVIAVVAGGLVGLVFAIIIVLLIMRVRKNKKGDIAYD
TVKKPIYKKAPTIEA
NT seq 588 nt   +upstreamnt  +downstreamnt
atgaacgtgaggctcgtgctgttcctggtcgggtgcctgctgagcgccgcggtggcagaa
tcgataagagaaacagagttgatggacccacatacaatgatcggcggtctgcttgaagct
tcaggggcagacgatgaagatatatacactgacaactatgatgatgaagattctgatgac
tatgaagggtcctctggctctggggatatagatgaagaatcagaggatgaccttgaatca
accatctccacacccaccgtaacccttggtaacaaaattctagaagacgatgtccgcaag
gtaaaagatcagaatgaagtcgtccaaatcaacaatgatatagaagtcttaaaggagact
atacctgacgatcaatcaaatcaaatctcaatggccagcacctctcatggcttcttcagc
agaacagaagttgtcattgctgttgttgctggtggattggtcggcttggtgttcgccatc
atcatcgtcttgctgataatgcgtgttaggaagaacaaaaaaggtgacattgcctacgac
acagtgaaaaaacccatctataagaaagccccaacaattgaggcatag

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