Bufo gargarizans (Asiatic toad): 122941317
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Entry
122941317 CDS
T07965
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122941317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122941317
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122941317
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122941317
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
GULLO2-like_3rd
Motif
Other DBs
NCBI-GeneID:
122941317
NCBI-ProteinID:
XP_044154379
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All DBs
Position
6:387514847..387529312
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AA seq
194 aa
AA seq
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MAPARCCVPGERLCSLEDCAPGYGTYCKHGYVFSSLSGYVTKKTDNGLMPVISVVRDTDS
HLLPDVGSVVTCKVMSINPRFAKVQIMYIGATALKNTFRGTIRKEDIRATEKDKVEVYKS
FRPGDIVVAKVISLGDAQSNYLLTTAENELGVVVAHSEAGATMVPISWCEMQCPKTHMKE
PRKVARVQPEFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgctcggtgttgtgttcccggggagcggctgtgcagcttggaggactgtgcg
ccgggctacgggacttactgcaaacacggctacgtcttctcctcgctgtctggatacgtc
acgaagaagacagacaatggtttgatgccggtgatctctgtagtgagggacacagactct
catcttctgcctgacgtgggctctgtggtgacctgtaaggtgatgagtattaacccaaga
tttgctaaagtccagatcatgtacatcggtgcgactgcgctcaaaaacacgttcagaggc
acaatcagaaaagaagatatccgtgcaacagagaaagataaggttgaagtttacaaaagc
tttcgaccaggagatatagtggtagcaaaagttatatctttaggagacgcccagtccaat
tatctgttgacaacggcagagaatgaattgggagttgtggttgcacatagtgaagcaggg
gcaaccatggtgcccatcagctggtgtgagatgcagtgtccgaagactcacatgaaggaa
ccgcggaaggtggcccgagtgcagccggagttcctacagacttaa
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