KEGG   Bufo gargarizans (Asiatic toad): 122941317
Entry
122941317         CDS       T07965                                 
Name
(RefSeq) exosome complex component CSL4-like
  KO
K07573  exosome complex component CSL4
Organism
bgar  Bufo gargarizans (Asiatic toad)
Pathway
bgar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122941317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgar03019]
    122941317
Messenger RNA biogenesis [BR:bgar03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     122941317
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     122941317
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 GULLO2-like_3rd
Other DBs
NCBI-GeneID: 122941317
NCBI-ProteinID: XP_044154379
LinkDB
Position
6:387514847..387529312
AA seq 194 aa
MAPARCCVPGERLCSLEDCAPGYGTYCKHGYVFSSLSGYVTKKTDNGLMPVISVVRDTDS
HLLPDVGSVVTCKVMSINPRFAKVQIMYIGATALKNTFRGTIRKEDIRATEKDKVEVYKS
FRPGDIVVAKVISLGDAQSNYLLTTAENELGVVVAHSEAGATMVPISWCEMQCPKTHMKE
PRKVARVQPEFLQT
NT seq 585 nt   +upstreamnt  +downstreamnt
atggctcctgctcggtgttgtgttcccggggagcggctgtgcagcttggaggactgtgcg
ccgggctacgggacttactgcaaacacggctacgtcttctcctcgctgtctggatacgtc
acgaagaagacagacaatggtttgatgccggtgatctctgtagtgagggacacagactct
catcttctgcctgacgtgggctctgtggtgacctgtaaggtgatgagtattaacccaaga
tttgctaaagtccagatcatgtacatcggtgcgactgcgctcaaaaacacgttcagaggc
acaatcagaaaagaagatatccgtgcaacagagaaagataaggttgaagtttacaaaagc
tttcgaccaggagatatagtggtagcaaaagttatatctttaggagacgcccagtccaat
tatctgttgacaacggcagagaatgaattgggagttgtggttgcacatagtgaagcaggg
gcaaccatggtgcccatcagctggtgtgagatgcagtgtccgaagactcacatgaaggaa
ccgcggaaggtggcccgagtgcagccggagttcctacagacttaa

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