Bufo gargarizans (Asiatic toad): 122941545
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Entry
122941545 CDS
T07965
Symbol
ZSWIM8
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122941545 (ZSWIM8)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122941545 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
122941545
NCBI-ProteinID:
XP_044154805
LinkDB
All DBs
Position
6:complement(160099978..160211801)
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AA seq
1830 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GFVSPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMLSPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCSHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLE
ILTEQCLTYEQITGWWYNVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIENVKRGQHKKSLDKLFQGFKPAVEACYFNWEEAY
PISGITYCSSDKKNSFCWVKAFQQRTCRLQCSEAVCEGGRAQGHESCLLFGERSRPSSQE
MSVRPKELVGKRKVASEVPQRVLRRLSTEGGEKAIYKSTVNKTKLPASKCLANKHSGKRR
MSSEDSSLEPDMAEMSLDDSSLALGAEASNTFSFIESPLSRRYRDNFEDEGGVYYSEGLE
STVIVSAAVPKPDAGMETSAANGSGEGDSIVADDEEKGSLKVEAVAEDGAVGGGQGHSKA
PEEGKSREKGEDEDDYQAYYLNPQETAKNEDEKAEEGTEEQDIFAGIKPLDQENRMEVLF
ACAEALYAHGYSSEACCLTVELAHDLLANPPDLKVEQPPTKGKKNKVSTSKQTWIATNTL
SKAAFLLTVLSERQEYHNLAFCIGMFALELQRPPASTKALEVKLAYQESEIVSLLKKIPL
DCNEMNTIRGRAKDLRDGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEM
PGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILD
KLLDRESQTHKPQTLSSFYSSSKPTTASQKSPSKHASQSTAAIIISGSPATHQQPGCEHR
GPWGITENFSEKNTQDSSQKTSNEPVEAQVYKQEGKVPSRLALGNRGGYNGRCWGSPVRQ
KKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWGATPWGRGQDSDSISSSSSDSLGSSS
SSGSRRASGGARAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNS
STSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAM
EIGSAALNILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNE
IQRALVQCKEQDNLMLEKACMAVEDAAKGGGVYPEVLFEVAHQWYWLYEQMMGGTPAQRE
GATGCSTGGARSVAEVVRGLTDSRIIPETSTVTVATAVTAATVVPVISVGSTIYQQHTAM
AHAHSQGLHPYTTLQTHIPTVCTPQYIGIPRQQMPQPTVFPVPGTLYTQGVHPAFIGAQY
PYTVTTPSIAATAVSFPGAPVPSMTQIAVHPYHTEAGLSLTSNVAIGSVHTGTTFPAIPG
TTLTTLTTQPTQLVTGSFPVEDEQHSQPVSPQCLHYLHSAYRVGMLALEMLGRRAHNDHP
NNFSRSPPYTEDVKWLLSLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAH
IHNHLRTPAFHQLVQRCQQSYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPLGAMQ
FNDILQNLKRGKQTKELWQRVSLEMATYSP
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcagagtgggaggacggcgagaggttttcttttgaggactcggat
cggtttgaagaggactccttatgctcttttatctcggaggcggaaagtctctgccagaat
tggagaggatggcgcaaacagtcagcagggcccaactcccctacagtcaaaatgaaagat
ggatttgtgagtccactagtggaactgtctgcaaaacaagtagcgtttcacattccattc
gaagtggtcgaaaaggtttaccccccagttccagagcagctacaactacgaattgcattc
tggagcttcccagagaatgaagaggatataaggttgtattcatgcttggcaaatggcagt
gccgatgagttccagagaggagaacagctgtttcgtatgagagccgtgaaggaccctcta
cagataggtttccacttgagtgccactgtggtccccccgcaaatgctttctcctaaaggc
gcctacaatgtggctgtgatgtttgaccgttgccggatcacgtcgtgcagctgtacctgt
ggagcaggagcaaagtggtgctcgcatgttgtggccctctgtctctttaggatacacaac
gcatcagcagtctgtctgcgagctccagtttctgagtccctgtccaggcttcagagggat
cagctgcagaagtttgcgcagtacctcatcagcgagctgccacagcagatactgcccact
gctcagcgtcttctggatgaattactgtcttcacagtcaactgccataaacacagtgtgt
ggagccccagatcccacagctggaccctctgcctctgaccagagcacttggtacctggat
gaatccactttgagtgataacataaagaagacgctccataagttttgtggcccttctcct
gttgttttcagtgatgtcaattccatgtatctatcatctactgagccacctgctgcagca
gaatgggcttgtctcctgcgccctttaagaggaagggaaccagagggtatttggaatctt
ctgtccattgttcgtgagatgttcaagagacgggacacgaatgcagcccccttactggag
atcctcactgaacagtgtctgacgtatgagcagataacaggttggtggtacaatgtgcga
acatcagcatcccatagcagcgctagtggacatacaggtcgcagcaatggacagtcagaa
gttgctgctcatgcctgtgctagtatgtgtgatgaaatggttgtcctatggagattagca
gttttagatcctaccatcagcccacaaagacgacgggacctctgttctcagttacgtcag
tggcaactaaaagtcattgagaatgtgaagaggggccagcataaaaagtctctagacaaa
ctcttccaaggttttaagccagcagtagaggcatgctatttcaattgggaagaggcatat
cccatttcaggaatcacttattgcagcagtgacaagaagaactctttttgttgggtcaaa
gcgtttcaacagagaacctgccgactgcagtgttctgaggcggtatgcgaaggtggacgt
gcacaagggcatgaaagctgcctactctttggagaacggtcacgtccttcttcccaggaa
atgtctgtacgccccaaggagcttgtgggcaaaaggaaagtggcatctgaagtacctcaa
agagttcttaggagactttctacagagggtggagagaaagctatatataaatctacagtt
aacaaaacaaaattaccagcaagtaaatgtctggccaacaagcacagtggaaagcgtcga
atgagtagtgaagatagttctctagaaccagacatggccgaaatgagtcttgatgatagt
agcttggcacttggtgctgaagccagtaatactttcagcttcattgaatctcctctaagt
agacgttacagggacaactttgaggatgagggtggtgtttactattcagaaggcttagag
tctactgtcattgtaagtgcagcagtgcctaaacctgatgcaggcatggaaacatctgct
gctaatggcagtggagaaggggattcgattgttgcagatgatgaggagaaaggaagcctg
aaggtggaggcagtggcagaagatggcgcagtgggtgggggtcaaggacacagcaaagca
ccagaagaaggtaagagccgtgaaaagggtgaggatgaagatgactatcaagcctactac
ttaaacccacaagagacagctaaaaatgaagatgagaaagcagaggaaggaacagaagaa
caggatatatttgcaggaataaagcctctggaccaggaaaacagaatggaggtattgttt
gcttgtgccgaggctctgtatgctcatggatacagcagtgaagcatgctgtcttacagtg
gaactagcacatgatctattggctaatcctcctgacctcaaggttgagcagcccccaacc
aagggtaaaaaaaacaaagtttcaactagtaagcagacgtggatagcaacaaacacattg
tccaaagcagccttccttctgactgtgctgagcgagcggcaggaataccacaacctggcc
ttctgtattggaatgtttgccctggagcttcagagaccccctgcttccaccaaagcatta
gaggtaaagctggcataccaagaatctgagattgtctcccttttaaagaagattccttta
gactgcaatgaaatgaacactattcgtggacgagcgaaggatttacgagatggcacactg
tgtgactatcggcctgtgcttcctcttatgctggccagttttatatttgatgtcctttgt
acaccagtggtatccccaacaggttcccgtcctccaagtcgtaaccgtaacaacgagatg
cctggggatgaagagctgggctttgaggcagctgttgctgcgctaggcatgaagacaacc
gtcagtgaagcagagcatcctttgctttgtgagggaaccagaagagagaagggtgatttg
gcactagctctaatgattacctacaaagatgatcaatcaaagctgaaaaagatattggac
aagctgttggatcgtgaaagtcaaactcacaaacctcaaactcttagttccttctactct
tccagtaaaccaacaacagccagtcaaaagtctccctccaaacatgcctcccagtccaca
gcagccattataatatcaggtagcccagccacgcaccagcagccaggctgtgagcaccgc
ggtccatgggggattactgaaaacttctctgagaagaacacacaggatagttcccagaaa
acaagcaatgaaccggtggaagcacaagtgtacaaacaggaaggaaaagtaccaagccgc
ctggcactgggaaaccgaggaggatataatgggaggtgctggggatcaccagtgcgtcag
aaaaaaaagcacacagggatggctagcattgacagcagcgcgccagaaactacatctgac
agctccccaacacttagtcgccgaccacttcgtggtggttggggtgctactccttgggga
cgagggcaggacagtgatagtatcagcagctcctcaagtgattcacttggttcatcatcg
tctagtgggagcaggagggcaagtggtggagccagagccaagacggtagaagttggaaga
tacaaaggccgtcgtttggagagccatgctccccatgtccctaatcaaccctctgaagca
gctgcccacttctattttgagctggcaaagactgtcctcatcaaagctggtgggaacagc
agcacatccatctttacacatccatcctccagcggtggacaccaagggccccatcgcaac
ctgcacctctgtgcctttgagataggtctctatgccctgggcctacacaattttgtgtct
ccaaactggctgtctagaacctactcttcacacgtctcctggataactgggcaggcaatg
gagattggaagtgcagcactaaatattcttgtggagtgctgggatggccatctcactcca
ccagaggtggcctctttggcagacagggcttcccgagctagagattccaatatggttcga
gcagcggcagaactggctctgagctgcctccctcatgcacatgcattgaaccccaatgag
atccagagagctctggtacagtgcaaagagcaggataaccttatgctagagaaggcttgc
atggcagtggaggatgcagctaaaggaggaggtgtttaccccgaagtcttatttgaagtg
gctcatcagtggtattggctgtatgagcaaatgatgggtggcactccagcgcaaagagaa
ggagctactggctgcagtacaggaggtgctcgttctgtggctgaggtggtgcgtggactt
acagacagcaggataataccagagacctccactgtgactgtggcaactgcagtgactgct
gcaaccgtagtcccggtgatatcagttgggtcaacgatctaccagcagcatacggcaatg
gctcatgcacacagccagggactacacccttatactactctccagacacacatacccact
gtgtgtactccacagtacattggaatccctcgtcagcaaatgccacagccaacagtcttc
ccagttcctggaacattgtacacacagggcgttcatccagcgttcatcggagcccagtat
ccctacacagtaacaactccttctattgcagctacagctgtgtcttttccgggggctcct
gtcccttcaatgacacagattgctgtccatccttatcatacagaagcagggctgtcgcta
acatccaacgtagcaatagggagcgttcacacaggaactacatttccagcaatccctggc
actaccctgacaacactaaccactcaacccacccagctggttacagggagcttccctgtg
gaggatgagcagcacagtcagcccgtcagcccccagtgcttacactacctccactctgcc
tatcgtgtcgggatgctggcattagagatgttgggtcgtagagcccacaatgaccacccc
aacaacttctccagaagccccccatacactgaggacgtcaagtggctgctgagtctagct
gccaagttaggtgtcaattatgtgcaccagttctgcgtcggagcagccaaaggtgtgctg
agcccattcgtactacaggagattattatggaggcacttcagcggcttaaccctgcccac
atccataaccacctgcgtacccctgccttccatcagctggtgcagcgctgtcagcagtct
tacatgcagtacattcaccatcgtttaatacatcttaccccagcggactatgatgacttt
gtaaacgccattcgcagcgcaaggagtgcattttgcctcacccctttaggagccatgcag
ttcaatgacattctacagaatctgaagagaggcaaacagaccaaggagctatggcagagg
gtgtccctggaaatggccacatattctccttga
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integrated database retrieval system
