Bufo gargarizans (Asiatic toad): 122941845
Help
Entry
122941845 CDS
T07965
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgar03009
]
122941845 (PDCD11)
Ribosome biogenesis [BR:
bgar03009
]
Eukaryotic type
90S particles
Other 90S particles
122941845 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
OB_RRP5_4th
OB_RRP5
Motif
Other DBs
NCBI-GeneID:
122941845
NCBI-ProteinID:
XP_044155244
LinkDB
All DBs
Position
6:complement(325491067..325547475)
Genome browser
AA seq
1339 aa
AA seq
DB search
MLFLGCVKEAKDFELAVNLPYGFTGYVQATNVCEAYTRLLNEQVEKDEPLEALSPLSVLY
SPGMLVRCVVSSLETTSGGYHSIKLSLNPKLVNADLMSRSLQMGMFLCGCVSSIEDHGYL
IDVGIGGTKAFLPRQKAQVYLNQTSTAASLRVGQYLNCVIDEVKNDGRIIRLSITQSDVA
AAIATEEQEWTLNNLLPGLVVKAQIQKILTDRVILSFLSSYTGVVDFLHLESKKVSSYKE
DQTVKACILWIDRSSKTIRLTLHKCFLQPGGSVKQLSSDCIGTLYESCTVKSLHKSAGAV
FQIDGKEFGFAFKKNLGVSKSKPLNTFNEGTVHKGRVVGFSPMDEILLLSFKADVIGNLY
LRLEDVQVGHILEGTVNSLTPVGMVVDITKRLNGLVPTLHLADVTLHQPEKKYTPGSKIK
CRVLSVDPSAKKLILTRKKIMINSQLPILTTYRDATPGLVTHGFIWTIKDFGCIVKFYNN
VQGLAPVRELSSAFISSPEEVFYKGQVVKVRVLECNPEKETLLLSFKILSDEETAVKKTK
SSKKSIEYGKIVDVRIVSKADEGLDVLILPEESPAFLPKAHLSDHIAISELLWHSLKEGD
PLTGVMVRSLFKGRTILTRKSALISFMEKEPVVNDVSKVTVGMVFTGFVKNIMPYGIFVE
FPYGFIGLAPKSKISDKFVTNIHDHFALGQTVVAKVTNIDEQTRRILVTLKMSQCAPDDR
SAESFSRLSQCFREVQLSRSLLSRDEHLEDGESIYSLVPGKKLTLVVEEVKEDGSVLFGV
SRISGAQKISAAQLQEKAKTLVTGQKAKVVVLHVDLLKSHVHVSVDETLLRKPKDTVVEG
TTHSAVVQHVAEEFAVVSLEDTAHLAAIPLTSHYNDTYRFDSEKLLFGEKILATVKSSST
DEYGLLLAVQHTTGAEEKLHKATMALVKKKPMIGEVVTGTVKSVKPTSVMVSVTDKLVGA
IHASQILDEVPDGVLPTSKLRIKQNVTCRVIGGRDVKTHRFLPITHPHLMKSILELSILP
SLMDTNEKIPNLRSVKMYLPGEKVTCFVVKYKKQEKHLEVEITPAIHGRVELLLLSKSSK
VLKRPERYFKQGQAVSATVVGTGFSPRALPLSLIDMHALTEGCVTTGCVKSISPNSGLEI
SLPFKKTGKASLFHLGDCYAESPVKNFTVGMFVRCYILSVEKTIEVSLRKSRTCPESANE
VTDKEIASVDNLEAGQLVSGFVGAVTEKGIFFRLSGSIVGRVEFRHASNYFIEDPKTYSS
YIPEGALLTAKILSIDRKKQHLELSLLSKDTGKPDVIPKLESFTLRNKMLSKRRRSESES
EDKVTKKRAEEENTRRASR
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcctgggttgtgtgaaagaagcaaaagactttgagttggcggtaaacttgcct
tacggtttcacgggctacgtccaggcaactaatgtttgtgaggcctacaccagattgctt
aatgagcaggttgaaaaagatgaaccactggaggctctgtcaccgctctcggtcctgtac
tcaccagggatgctggttagatgcgtggttagtagcctggagaccacgtctggtggctac
cacagcatcaaattgtctctgaaccccaaactggtcaatgcggatctcatgtcgcggtct
ttgcaaatgggcatgtttctctgcggctgtgtgtccagcattgaagatcacggatatctc
atagatgtagggattggaggaactaaagctttcttgccgcgtcagaaggcccaagtgtac
ctaaatcagacaagtacagctgcatctctgcgggtcggtcagtatttaaactgtgtgatt
gacgaagtaaagaacgatggccgaattatacgcctgtccatcacgcagtctgatgtggca
gcagctattgccacagaggagcaggagtggaccctgaataatcttctgccaggtctggtg
gtaaaagctcagattcagaagatcctaactgaccgagtcatcctatccttcctgtcctcc
tacactggggttgtggatttcttgcacttggagtccaagaaagtcagttcttacaaggaa
gatcagaccgtgaaagcctgtatcttatggattgacagatcttccaagaccatcagactg
accctccacaagtgcttcttgcagcccgggggctctgtgaagcagctgagcagtgactgc
atcggcactctgtacgagagctgcacagtgaaatccttgcataagagtgcgggcgctgtc
tttcagatcgatggaaaagaatttggttttgcatttaagaaaaaccttggtgtttcaaag
tcaaaacctctgaatacgttcaacgaaggaacagtccataaggggcgagtcgtgggcttt
agccctatggatgagatacttctgctgtctttcaaagcagatgttattggaaacctttat
ttgaggcttgaagacgtgcaggttggacacattctggagggtactgtaaatagtctaaca
ccggtaggaatggtagtggatatcacaaagcgcctcaatggccttgtacctacgcttcac
ctagccgatgtcaccctgcaccaaccagagaagaaatacactcctgggagcaagatcaag
tgcagggttctaagtgtggatccatcagccaagaaattgatcttgaccaggaaaaaaatt
atgatcaactcacagttgcctatcctgaccacctaccgcgatgctacacctggtctggtc
actcatggctttatttggacaataaaagattttggatgcattgtcaagttttataacaat
gtccaagggctggcgccggttcgggagctgagctctgcattcatttcctcaccagaagaa
gttttctataaaggacaggtggttaaagtaagagtattggagtgtaatcctgagaaagag
actcttctgctgtccttcaagatcttatccgacgaggagactgcagtcaagaagaccaag
tcttccaaaaagagcattgaatatgggaagattgttgatgtgagaattgtaagtaaggca
gacgaggggctcgatgtgctgattctgcctgaggaaagtcctgcgtttcttcctaaggct
catctttctgatcacatcgccattagtgagctcttgtggcacagtttgaaggagggtgat
cccctcactggagtaatggtccggagcctgttcaaaggcagaactatactaaccagaaaa
tctgccctgatctccttcatggaaaaggagccggttgtcaatgacgtctctaaagtgacg
gttgggatggtgttcaccggatttgtgaaaaatataatgccgtatggtatctttgtggag
ttcccatatggatttattggtctggctcccaaatcgaaaatcagtgacaagtttgtgacg
aacatccatgaccattttgcgctggggcagacggtggttgcaaaagtgacaaatatagat
gagcagacgagacgcatcctggtaaccctgaagatgtcccagtgtgcccccgacgaccgc
tcggccgagagcttttcacgtctgagccagtgcttcagagaagtccagctctcgaggagt
cttcttagcagagatgagcatctggaggatggtgagagcatttactcattagtcccaggg
aagaagctgaccctcgtagttgaggaggtgaaggaagatggttcagtcctgtttggcgtc
agtcggatctctggtgctcagaaaatatctgcagctcaacttcaggagaaagcaaaaacg
ttggtcacaggacagaaggcaaaggttgtggtgctacatgtcgatctcctgaagtcccat
gttcacgtctctgtggatgagactcttctgagaaaacctaaagacacagttgttgaaggc
acaacgcattctgctgtggtacagcacgtggcagaagaatttgcagtcgtgtccttggaa
gacacggctcatcttgcagctatcccactcacaagtcactataatgacacttatcgattt
gactcagaaaagttactatttggagagaaaatcttggcgacagtgaagagttccagtact
gatgaatatggcctcctcctggcagtccaacataccactggagcggaggaaaagctccac
aaagccactatggcccttgtgaaaaagaagccaatgattggggaagtggtcacggggacg
gtaaaaagtgtgaagcccactagtgtaatggtttctgtaactgataaactagttggggcg
atccatgcctcccaaatattggatgaagtgccggacggggtcctccctacgtccaagctg
aggattaagcaaaatgtaacctgtcgggtaataggaggacgagatgtgaagactcacaga
ttcctcccaattactcacccacatttgatgaagtccattctggagctcagtatcctcccg
agtctgatggacaccaacgagaagattccaaacctcagatctgtgaagatgtacttgcct
ggggagaaggtgacctgctttgtggtcaagtacaagaagcaggaaaagcatctcgaggtg
gagatcactcctgccatccatgggcgagttgaactccttctgctctcgaagtcaagcaag
gtattgaagcggcctgaaaggtatttcaagcaagggcaggcagtgtcggctactgtggtt
ggaacgggcttttccccaagagcactccctctgtcgctcatagacatgcacgccctgaca
gaaggttgtgtgaccactggttgcgtgaaaagcataagcccaaactctggtttagaaata
tcattgccctttaaaaagaccggaaaagccagcctcttccatttgggcgactgctatgct
gagagtcctgtgaagaactttaccgtcgggatgtttgtcaggtgctacatactgtctgtg
gaaaagaccattgaggtgtcccttaggaagtctcggacatgtccagagtctgcgaatgaa
gtgacggataaagaaatcgcctccgtagacaacctggaggcaggacagttggtgtcaggt
tttgttggagcggttacagaaaaggggatcttcttccggttatcgggctccattgtcggc
cgtgttgagtttaggcatgctagtaattactttattgaagaccctaaaacatactcttca
tatatcccagaaggagccctgcttacagccaaaattctgtcaattgacagaaaaaagcag
cacttggagctctcccttctctctaaggacacgggaaaaccagatgtcattccaaagttg
gaaagtttcaccttgaggaataaaatgctttctaagaggaggagatcagagtctgaaagt
gaagacaaggtcactaaaaagagagcagaagaagaaaacacaagaagagcctcaagatga
DBGET
integrated database retrieval system
