Bufo gargarizans (Asiatic toad): 122942066
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Entry
122942066 CDS
T07965
Symbol
CDH23
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-23
KO
K06813
cadherin 23
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bgar03037
]
122942066 (CDH23)
04515 Cell adhesion molecules [BR:
bgar04515
]
122942066 (CDH23)
Cilium and associated proteins [BR:
bgar03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122942066 (CDH23)
Cell adhesion molecules [BR:
bgar04515
]
Cadherins
Major cadherins
122942066 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
122942066
NCBI-ProteinID:
XP_044155493
LinkDB
All DBs
Position
6:complement(164063363..165365534)
Genome browser
AA seq
3343 aa
AA seq
DB search
MAFLYLYSLGVTYNRLPFFLNYFFDTYLLINEDTPVGSSITQLRAQDYDGDKLVYGIVGD
EASKFFAVESETGVVWLRQSLDRETKSEFTVEFSVSDSQGVIKGKVNIQVGDVNDNAPIF
HGQPYTVRIAENTPVGTPIYIVNATDPDQGTGGSVLYSIQPSSSFFAIDRSRGIVTVISP
LDYETTVAYQLQVNATDQDKTKPLSTLANLAITVTDIQDMDPIFVNLPYSTNIYENSPPG
TTIRMITAIDQDRGRPRGIGYTIVSGNTNSIFALDYISGALTLNGQLDRENPLYTSGFIL
TVKGTELLDDRSPSDATVKTTFNILVIDINDNAPQFNSSEYTVSIPELAQLGFALPLYIQ
VQDRDEGINSAFEVYLVGNNSNHFIISPTSIQGKADIRMRVAVLLDYETIPRYEFSLFAN
ESVLDHVGFSQVKINLINENDNRPIFSQALYNITLYENVTVGTTILQVSATDNDVGTFGK
VSYFFSDDPDKFSLDKNTGIITLIARLDFETTQRYTLTVIARDGGGEETTGRVRINVLDV
NDNAPIFQKDSYLGAIRENEPSVITVIKLRATDEDSPQNNQIIYSITEASAFRSFFEITI
SEGYGVITVIRPLDYEQISNGVITLQVMARDSGVPPLNSSVPISIEVFDENDNPPTFSRP
SYVITVMENIMAGATVLFLNATDLDRSREYGQESIIYSLDGSPQFRINARSGEITTTTLL
DRETKSEYILIIRAVDGGVGPNQKIGIATVNITLLDINDNAPQWKDEPYLINLVEMTPPD
SDVTMVVAFDPDLAENGTLVYSINPSNKFYTLNSTTGKIRTTGVVLDRENPNPQEAEMMR
RIVISVTDRGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFIAEILEGTPVGASVFQVVA
VDLDEGLNGQVTYRMQVGMPRMDFTINSTSGVVTATTVLDRETIAEYYLRVVASDAGTPS
KSSTSTLTVRVLDTNDENPTFYPALYNISLAENVPRDYIVARLNCSDADTGLNAELSYFI
TGGNQDGKFIVGFRDGILRTVVSLDRETVASYTLILEAIDNGPAGNRKTGTATVLVTVLD
INDNRPIFLRSSYEATVPENIPESSSIIQLEATDADEGENGRVWYRIISGNSRNFRIDVS
TGLLMRGPLALDRETNSSHVLMVEAYNSDQGSMRSSVRVIVYVDDVNDELPVFTQQQYSR
LGLRETVGIGTSVTVVRATDRDTGDGGLVAYKLLSGSDGKFEIDGSTGLLTTIDYLDYET
KTSYTMNVSATDQTPPYNRGFCSIYVTLMNEPDEVVQFSNSRYEAAILENIATGTEVVRV
QARSIDNLNQLTYRFDQNTNAQALALFKIDKITGTITVKGLVDRETGDFYTLTVVADDGG
PKLETTVVQITVLDENDNSPQFDPTSESVVNMPEDCPVGRRIALVLARDPDAGDNGQVSF
SLVGGNVDRLFEIRTTNDTYGEVFLVKPLDRELQEVHSLRIRASDKGLPPRRTDYTLTVN
IMDVNDNPPVIDSPFGYNVSVFENVGGGTSVIKVTATDKDKGLNSVLSYYITQGNEDLIF
RMDRLTGEIATRPSPPDREKQSFYRLMVVVEDEGNPALSATTVVYVTILDENDNAPMFER
LLYEVTLDEGPMSLNSIIITTTAVDRDEGLNGTVTYSIISGNLQGTFTINNSTGLIRAVK
ELDYEVCLGRYTLIVTATDRCPILLRRLTSTTTVLVNVNDINDNWPTFPKSYEGPFDITE
GQPGPRVSTFKAEDKDAGLNGQVEYIIVGGDILGEFVISSVEGDLRVRKDYELDRENIAS
YNLTIMAKDRGNPPFSATTVVEVRVLDINDNDPVLLNLPLNITISENTPVSTPITRILAS
DADTGRNAILTFNITAGNGENTFFINENSGIVYVNRPLDREIISEYRLTVTVRDNPENIR
NSRRDFDLLIVTISDENDNRPVFSQGSYQAEIMENSPSGTTINVLNGPILALDNDLGPNA
LVSYRLLGLQIAFFSMNNSTGVVAVRSGIDRESYAVPVLNLTLVAEDIGRLNSTATLALT
ILDANDNRPVFSAQSVNVHLLENSPPGFSVVQVSATDADSGPNQQLIYRIESGARDRFHI
DAITGVIRVANVTVDREENDAYRLTVVATDHGTAPLSGSTTVNILIDDVNDCPPEFINPV
QTVSVLESVEVGTIIAEVTAIDRDLNPRLQYYIIEMLATDDTNAIVPNQQAAFSINFNTG
AVMVNSPLNRELVATYDISVSVYDNASQVVDRTVSVPNAKLTVNVLDVNDNTPRFRPFGV
TVFTQRIIEGATPGTTLLSVSAVDPDKGPNGLITYSLHSLVPAGYAQLEDNMAGKIIANR
TVDYEQVQWLNFTVRASDNGSPRRSTEIPVYLEIVDINDNNPIFSQSSYQKPVFEDIQLG
STVLRIKATDADSGRFALIQYSLVDGEGKFGINPTTGDIYILSPLDREKKDYYTLTAVAR
DNPGDITSNRRENSVQVLITVLDVNDCRPQFSKSQFSTSVYENEPEGTSVITMSATDLDE
GDNGVVTYNLEGPGADAFLIDKDSGLITSRRLLQSFERFNLTVVATDKGRPPLWGTTMLK
VEVIDVNDNRPVFVRPPNGTILHIKEEIPLKSTVYEVYATDNDEGLNGAVRYSLLKTGAG
NKDWEYFSIDSTSGLIQTAQRLDREKQAMYNLIIVAYDLGQPVPYEAMLPLQVALDDIDD
NEPIFVRPPRGALQYQILSVREHSRSGTVVGNVTGALDADEGSNAIVYYFIAAGNEENNF
QLIPEGKLTVLKNLDREKEPYYTLIVKASSNRNWSARKAMRTAKIQRFDPSTDSTLQEVR
IYLEDINDQSPRFTKSEYTTGVATDAKVGSELIKVVAIDADVGNNSLVFYTILGIQYIKH
NSNDSEAVKNIFVIGNTDGIIRTFDLFTAYSPGYFVLDIMASDLAGHNDTAVVGIYILRD
DQRLKIVINEIPDRVREFEEEFIRLLSNITGAIVNTDDVQFHVDKKGRVNFAQTDMLIHV
VNRDTNRILDVDRVIQMIDENKEQLRNLFRNYNVMDVQPATAPRAAEDLSALQMAIIILA
ILLFLAAMLFIFMNWYYRTVHKRKLKAIVAGSTGNRGFMDILDMPNTNKYSFEGANPVWL
DPFCRNLELAAQAEHEDDLPENLSDITDLWNSPARTHGTFGREPTATKPEDDRYLRAAIQ
EYDNIAKLGQIMREGPIKGSLLKVVLDDYMRLKKLLAQRMVHKATTSSGDQSSVTELIQN
DLDEDDDQSPRHGSLRFKHKHPVEXKGPDGIHVVHGSTGTLLTSDINSLPEDDQKGIGRS
LETLNTDNCAFSDRNARTESAKSTPMHKLRDTIMESPLEITEL
NT seq
10032 nt
NT seq
+upstream
nt +downstream
nt
atggcattcctttatctttattccttaggtgtgacctacaacagacttccatttttctta
aattacttctttgatacatacttgctcattaatgaagacactcccgttggttcttcaatt
actcaactacgtgcacaagactatgatggtgacaaattggtgtatggaatagtaggcgat
gaagctagtaaattttttgctgtggaaagtgagactggtgtggtttggcttcggcaatca
ttggatcgagagactaaatcagaattcacagttgaattttctgtcagtgacagccagggg
gttattaaaggcaaagtaaatatccaggttggggatgtcaatgacaatgcacctattttc
catggccagccatatacagtgcgcattgcagagaacacaccagtgggaactccaatttat
attgtgaatgccacagatcctgatcagggaacaggtggaagcgtgttgtactcgattcag
ccatcctccagtttttttgcaattgataggtctcgggggattgtgactgtgatcagtccg
ctggactatgaaaccactgtggcataccaacttcaggttaatgcaacggatcaagacaag
acaaaacctctgtcaacattagctaaccttgccattacagtcactgatattcaagacatg
gacccaatttttgtcaatttgccgtatagcactaacatatatgaaaactcacctccgggg
acaacaatacgtatgataacagcaattgatcaagacagagggcgtcctagaggaattggt
tacactatagtttcaggtaacaccaatagtatatttgccttggattatatcagcggtgca
ttaaccctgaatgggcagctagaccgagaaaatcccttgtacacatcaggattcattcta
acagttaagggaactgaattgctggatgacagaagtccttctgatgccactgtgaaaact
acattcaacattctagtgattgacatcaatgacaacgctccacaatttaatagctcggag
tacacagtcagcattccagagttagcccaacttggttttgcgctgcctctgtatattcaa
gtgcaagatagggatgagggtatcaacagtgcctttgaagtttaccttgtgggaaacaac
tccaaccactttatcatttctccaacctccatccaaggaaaggctgacatccgcatgaga
gttgcagtgctcctggactatgagacaataccccgctatgaattttcactgtttgcaaat
gaaagcgtcttggatcatgtgggattttcccaagtgaaaattaacctgatcaacgaaaat
gataaccgtcctatcttcagccaggcgctctacaacattactttgtatgagaatgttact
gtgggaaccaccatcctccaagtttccgctacagataatgatgtcgggacttttggaaaa
gtgagctacttcttcagtgacgatccagacaagttttcacttgataaaaacacgggtata
attacccttattgctcggctggattttgagactactcagcgctacaccctaacagtgatt
gccagggatggtggaggtgaagagacaactggtcgtgtgcgcatcaatgttttggatgtc
aatgacaatgcacccatctttcagaaagattcctaccttggagcaataagagagaatgaa
ccatctgtgatcacagtgatcaagcttagggcaactgatgaggactctccacaaaataac
caaattatttacagcattaccgaggcttcagcattccgaagcttttttgaaattacaata
tctgaaggttatggagtaataactgtcattcgacctttggattatgaacaaatttccaat
ggagtaataacattgcaagttatggcaagagattcaggggttccacctttaaacagttct
gtacccattagtattgaagtctttgatgagaatgacaaccctcccacatttagtcggcca
tcgtatgtgattactgtaatggaaaatattatggcaggtgctactgtgctgtttttaaat
gctacagatttggatcgatccagagaatacgggcaggaatctattatatactcattagat
ggttcacctcagtttcggatcaatgcccgatcaggagaaataactacaactactctactg
gatcgggaaacaaagtcagaatacatcttaattatacgagcagttgatggaggtgtggga
cccaatcaaaaaattggcattgctacagtaaatatcactttgttggatataaatgacaat
gctcctcagtggaaagatgaaccttaccttattaatctggtagagatgacaccgccagat
tcagatgtcaccatggtggtagcttttgatccagaccttgctgaaaatggcacactggtt
tacagcatcaacccttcaaataagttttataccctgaatagtaccacaggaaaaatccgt
actactggtgtcgttttagacagggaaaacccaaatccacaagaagcagaaatgatgaga
agaattgtaatttctgtaacggaccgtggtagacctcctctccgggccacaagcagtgct
acagtatttgtgaatttgctggatcttaatgataatgatcccacatttcagaatctgcca
ttcatcgcagagatcctggagggcacgcctgttggtgcatctgtattccaggtggtggct
gttgacctagatgaaggtctgaatggtcaagtaacatatcgaatgcaggttggaatgccg
cggatggactttactataaacagtactagtggggttgtcacagccacaactgttctagac
agagagacgattgccgaatattacctccgggtagtagccagtgatgcaggaactccatcg
aaaagctctacaagtactcttacagttcgagttctagacaccaatgatgaaaaccctact
ttttacccggctctgtacaacatttcactggcggagaacgtacctcgagattacattgtg
gcacgtctaaactgctcagatgccgatactggattaaatgccgaactgagttatttcata
acaggtggaaaccaagatgggaagttcattgttgggtttcgtgatgggattctgagaaca
gtagtgagtcttgaccgggagaccgtggcttcttatactctaattctagaagctatagac
aatggaccagcaggaaatcggaaaacagggacagccactgtcctagtgacagtactggac
atcaatgataacagacccatctttctgagaagcagttatgaagccactgttcctgaaaat
atccctgagtccagcagtattattcagttggaagccaccgatgcagatgaaggggagaat
gggagagtttggtaccgtattattagtggaaatagcagaaattttcgtattgatgtaagt
acaggactacttatgcgaggtccactggctctggacagagaaaccaattcctctcatgtt
ttgatggtggaggcatataatagtgatcaagggtcaatgagaagctctgtgcgggtaatt
gtttatgtagatgatgttaacgatgagctgcctgtcttcacacaacagcaatatagtcgc
ttgggccttcgagaaactgtggggattgggacttctgttactgttgttagggctactgat
cgggacacaggcgacggtggactagtggcgtataagttactttcaggctctgatggaaag
tttgagattgatggaagcactggactgctgacaacaattgattacctggactacgagact
aagacaagttacactatgaacgtgtcagccaccgatcaaactccaccttacaatcgtggt
ttctgctctatctatgtcactttgatgaatgaacctgatgaagttgttcagttctccaac
agcagatatgaggcagcgattttagagaacattgccacaggcactgaagtggttcgtgtg
caggctcgttcgatcgataatttaaaccagctcacttatcgatttgaccagaacaccaat
gcccaagccttagcacttttcaaaattgataaaatcacagggacaataacggtgaaaggt
ttagtagatcgtgagactggagacttttatacattaactgtagtagcagacgatggcgga
ccaaagctggagacgactgtggtgcaaatcacagttttagatgagaatgataatagtccc
caatttgatccaacatcagagtcagtagtgaatatgccagaggattgtccagtggggaga
agaatagctctagtcctggctagagaccctgatgctggagataacgggcaagtgtctttt
tctcttgttggtggaaatgtagacagactttttgagatccgcactacaaatgatacttat
ggtgaagttttccttgtgaaaccactggacagagagctacaagaagtgcactcgttaagg
atccgggcatctgacaaaggattgcctcctcgacgcacagattatacattaacagtgaac
ataatggatgtgaatgacaacccacctgttatagatagcccttttggctataatgtcagt
gtttttgagaatgttggagggggaacatcagttattaaagtgacagcaacagacaaggac
aaaggactgaacagcgtcctatcttattacattacacaaggcaatgaggacttaattttc
cgcatggataggctcacaggtgaaattgccactcgcccatctcctcctgaccgtgaaaaa
cagagcttctatcgcctcatggttgttgtggaagatgaaggaaaccctgctttgtcagca
acaacagtagtttatgtgaccatcttggatgaaaacgacaatgcacccatgtttgaaaga
ctgctgtatgaagtaactttggatgaaggtcctatgtcccttaactctatcataattaca
actacagctgtagatcgtgatgagggtctcaatggaacagttacctactctataataagt
ggcaaccttcagggcacatttactataaataattccacgggactgattcgagcagtaaaa
gagctggattatgaagtgtgcctgggaagatatactctgattgtaactgccacggacaga
tgtcccattttgctacgtcgtctgacatctaccaccacggtcttagtgaatgtaaatgac
ataaatgacaattggccaacatttcccaaatcatatgagggaccttttgacataacagag
ggacagccaggtccaagagtttcgactttcaaagctgaagataaagatgcaggtcttaat
ggtcaagtagagtacatcattgttgggggtgatattcttggggagtttgtaatttcatcg
gttgagggtgatttgagagttagaaaagactatgaattggatcgagagaacattgcttct
tacaaccttaccattatggcaaaagacagaggaaatcctccattcagtgctacgactgtt
gttgaagtacgggtattagatattaatgacaatgaccctgttctcctcaacctgccacta
aatataaccatcagtgagaacacgccggtatcaacacccatcaccagaattctcgctagc
gatgctgacaccggacgcaatgcaattctgacttttaatataactgcagggaatggagag
aatacatttttcatcaatgaaaattctggaatagtttatgtaaatcgacctcttgataga
gagataatttcggaatacagactaaccgtgactgtgagagacaatcccgaaaatatacgc
aactcaagaagggattttgacctattgattgtcacaatatcagatgagaatgataaccgg
cctgtgttttctcaaggatcatatcaagcagagattatggagaattcgccatcaggaaca
accatcaatgttctcaatgggccaattttagctttagataatgacttaggaccaaatgct
cttgtgtcgtatcggcttctagggcttcaaattgctttttttagcatgaacaacagtaca
ggtgttgttgctgtgaggtcaggaatagacagagagtcgtatgctgtcccagtattaaat
cttaccttggtggcagaggatattggcagactgaacagcacagccactcttgcattaaca
atattagatgccaatgacaacaggcctgtcttcagtgcacaaagtgttaatgttcatctc
ctggaaaacagtcctccaggtttttctgttgtgcaggtgtcagcaacagatgcagacagt
ggaccaaaccaacagctaatctacagaatcgaaagtggtgctcgagataggtttcatatt
gacgccatcacaggtgtcattcgtgtagccaatgtgactgtggacagggaagaaaatgat
gcctacaggctgacggttgtggccacagaccatggtaccgctcccttgtccggaagcacc
acagtaaatatccttattgatgatgtaaacgactgccctccagagtttattaatccagtt
cagactgtcagtgtcttagagtctgttgaagtgggaacaattatagccgaggttactgcc
attgaccgagacctcaacccacgtctgcaatattacattattgaaatgttggccactgat
gacaccaatgcaattgtgcctaatcagcaggctgctttcagtattaacttcaacacagga
gcagttatggtaaattctcccttgaatagagagctagtggctacatatgacatttctgtc
tctgtttatgataatgcaagtcaggtggttgatagaacagtcagtgtcccaaatgcaaaa
ctaacagtcaatgttctggatgtcaatgacaacactcctagatttcgcccttttggggtt
actgtttttactcagaggattattgaaggcgctaccccgggaaccacactcctatcagtg
tctgctgttgatccagataaaggacccaatggtctcattacttattctctccatagcctg
gtcccagcaggatatgcacaacttgaagataatatggcaggaaagattatcgcaaaccgt
actgttgactatgagcaggtgcaatggttaaattttactgtccgggcctcagataatggt
tctcctcgtagatctactgagattccagtttaccttgagattgtggatatcaatgacaat
aatcctatcttcagccaatcctcatatcagaaaccagtatttgaagacattcaactaggt
tcaacagttctacggattaaagcaacagatgcagactctggacggtttgctctcatccag
tacagtcttgttgatggagagggaaagtttgggataaatcctacaacgggggacatatac
atcctatctccgctggacagagagaagaaggattattatactctcaccgctgtcgccaga
gataatccaggagatatcacaagcaaccgccgtgagaactctgtgcaggtccttattact
gtactggatgttaatgattgtagacctcagtttagcaaaagtcagttcagcaccagcgtg
tatgagaatgaaccagaaggcacatctgtcatcactatgtcggccacagacctggacgag
ggagacaatggagtggtgacttacaatttggaaggccctggtgctgatgccttcctcatt
gataaagactctggtctgataacatcacgaagacttctgcagtcttttgaacgatttaac
ttgactgttgtagcgactgataaaggcagacctccattatgggggaccaccatgttaaaa
gtggaagtgattgacgtcaatgacaatcgccctgtatttgtccgacctcccaatggtact
attcttcacataaaagaggaaattcccttgaagtctactgtgtatgaggtttatgccact
gataatgatgaaggtttgaatggtgcagtacgctacagtctgctaaaaactggagctggc
aataaggattgggaatattttagtattgactcaacaagtgggctcatccaaacagctcaa
aggttggaccgggaaaagcaagccatgtataatctaattattgttgcctatgatcttggg
cagccagtgccttatgaagccatgctacctcttcaggttgcactagatgatattgatgac
aatgagcccatctttgtccgaccgccgagaggtgctttacagtatcagattctctctgtc
cgtgaacattccagatctggaacagtggtgggaaatgtcactggggctctagatgcagat
gaaggatcaaatgctatagtgtactacttcattgcagctggcaatgaggaaaacaatttc
cagctgattccagaaggaaaactcactgttctgaagaacttggatcgagagaaggaacca
tactatactcttatagtgaaagcatccagcaacagaaactggtcagcccgcaaagcaatg
aggaccgccaagattcagagatttgatcccagcacagactctacattacaagaagtgaga
atctaccttgaagacattaatgaccagtcacctagattcacaaaatctgagtataccaca
ggtgttgccactgatgctaaagtgggttctgaactcataaaagttgtagcaattgatgct
gatgtgggaaacaacagtttagtattttataccattctaggtatccagtacatcaaacac
aactcaaatgattctgaagcagtgaaaaacatttttgtgataggtaacactgatggcatt
attcggacctttgacttatttactgcctacagccctggctattttgtgctggacatcatg
gcttctgatctggctggacacaatgacacagctgttgttggtatctacattttgagggat
gaccaacgcttaaagatagtaataaatgagattccagatcgagtgcgtgagtttgaggaa
gaatttatacgcctgctttccaacataacaggagccattgtcaatacagatgatgtacag
ttccatgtggacaaaaaaggcagagtcaactttgcacagactgacatgctaattcatgtg
gtaaaccgtgacaccaacagaattcttgatgttgatagagttatacagatgattgatgaa
aataaagaacagttgcgtaatctcttccgtaattacaatgtcatggatgtccaaccagcc
accgctcctcgtgctgcagaggacctatctgctttgcagatggcaattattatattggct
atcctcctgtttctggctgccatgttgtttatcttcatgaactggtactatcgcactgta
cacaaaaggaagttgaaagcaatagtggccgggtcaacaggaaacagaggttttatggat
atccttgatatgcccaatacaaataaatactcttttgaaggtgcaaatcctgtatggctg
gatcccttctgcagaaatttggaattggcagcacaagcagagcatgaggatgatttacct
gagaacttgagtgacataacagatctttggaacagcccagcaagaactcatggcactttt
gggcgtgaaccaacagctaccaaaccagaagatgaccgctaccttcgtgcagcaattcag
gagtatgataacattgcaaaactggggcagatcatgcgtgagggacctattaaggggtct
ctgctgaaagtagttctggatgattatatgagactgaaaaagttattagcacagagaatg
gttcataaagccaccaccagcagtggggaccaatcctcggtcacagagttgatccagaat
gatttggatgaagatgatgaccaaagcccaagacatggttctttgcgtttcaagcacaaa
cacccagtggaanataaaggaccagatgggattcatgtggtgcatggaagtactggaact
ctcttgacttctgacatcaatagtttaccagaagatgaccaaaagggcattgggcgatct
ttagagacactaaacacagacaattgtgctttcagtgacagaaacgctcgcacagaatct
gcaaaatccacaccaatgcacaagctgagagacaccataatggaaagccctttggaaata
acggaattatga
DBGET
integrated database retrieval system
