Bufo gargarizans (Asiatic toad): 122942359
Help
Entry
122942359 CDS
T07965
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03420
Nucleotide excision repair
bgar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122942359 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
122942359 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122942359 (ERCC8)
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122942359 (ERCC8)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122942359 (ERCC8)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122942359 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_RIG_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML
ANAPC4_WD40
WD_LRWD1
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_RFWD3
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_1st
Beta-prop_Nup120_160
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
122942359
NCBI-ProteinID:
XP_044155901
LinkDB
All DBs
Position
1:complement(177160627..177162656)
Genome browser
AA seq
399 aa
AA seq
DB search
MIGFLWSRVCGIDSPVRLRRAECTRRVLSLELNKDRDVERMHENGINTLDIEAVEGRYML
SGGADGIIVLYDLESFSQTPSYTCKALGKVGKGHPDVHKFSVETVQWYSHDTGMFSSSSF
DKTLKIWDTNSLQLAEVFQFDGNVYSHHMSPVATKHSLIAVGTKNPKVQLCDLKSGSSTH
ILQGHRGEVLSVCWSPRYDYILATASADSRVKLWDVRKASGCLITLDQHNGEKSKSSAEA
TNTAHNGRVNGLCFTSDGLHLLTLGTDDRMRLWNSATGENTLVNYGKVSNDSRKGVKFTV
SVGCSPEFVFVPYDSTIGLYTIHSGQKISVLRGHYNDVNCCVFQPPFQELYSGSKDCNVL
AWIPAVREPLPDDDSENSRSQVHLHPAFQDAWSSSDEDG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgataggatttctctggtccagagtctgcggtatagatagccccgttcgtctcaggcgg
gcagaatgcacacgaagggtgctgagcttggagctgaataaagaccgagatgttgaacga
atgcatgaaaatggaattaacactcttgacatagaagcagtggaagggcgatatatgctg
tccgggggcgcggatgggatcattgttctttatgacctcgaaagttttagtcagacgccc
tcttacacatgcaaagcgcttggtaaagtgggcaaaggccaccctgatgtccacaagttt
agtgtagagacggtccagtggtactcgcatgacactggcatgttttcatcaagttcattt
gacaagactctgaaaatctgggacactaattccttacaactggcagaggtctttcagttc
gatgggaatgtttatagccaccacatgtctccagtggcaacgaagcatagtttaatagcc
gttgggacaaaaaatcctaaagtgcagctctgtgacttgaaatctggctccagtacacat
atattacagggtcatagaggggaagtcctctctgtctgctggtctccaagatatgactat
atcttggctactgcgagcgccgacagccgggttaaactgtgggatgtccgcaaagcatct
ggctgcctgataacgttggaccagcacaacggtgaaaagtccaaatcttctgcagaagct
acaaacactgcccacaatggaagagtgaatgggttgtgctttacaagtgatgggctgcat
cttctgacccttggcacagatgacaggatgcgtctgtggaacagcgccacaggggaaaac
actttggtcaattatggcaaagtttcaaatgacagtagaaaaggtgtcaagtttaccgtt
tcagtgggctgtagcccagagtttgtctttgtaccatatgacagtacaattggtttgtat
accatccattcaggtcaaaagataagtgtactaagggggcattataatgacgtgaactgt
tgtgtgtttcagcctcccttccaggagctttacagtggcagcaaagactgtaatgttcta
gcatggattcctgcagtacgggaacctcttcctgatgatgacagtgaaaattcaaggtca
caggtacatcttcatcctgcatttcaagatgcctggagcagcagtgatgaggatgggtga
DBGET
integrated database retrieval system
