Bufo gargarizans (Asiatic toad): 122942597
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Entry
122942597 CDS
T07965
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04510
Focal adhesion
bgar04520
Adherens junction
bgar04810
Regulation of actin cytoskeleton
bgar04820
Cytoskeleton in muscle cells
bgar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122942597 (VCL)
04520 Adherens junction
122942597 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122942597 (VCL)
04810 Regulation of actin cytoskeleton
122942597 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122942597 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bgar04812
]
122942597 (VCL)
04147 Exosome [BR:
bgar04147
]
122942597 (VCL)
Cytoskeleton proteins [BR:
bgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122942597 (VCL)
Exosome [BR:
bgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122942597 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Talin_R4
Dynactin_p22
Motif
Other DBs
NCBI-GeneID:
122942597
NCBI-ProteinID:
XP_044156202
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All DBs
Position
6:complement(206716983..206924434)
Genome browser
AA seq
1147 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPELTAPVAAVQSAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFIKVENACAKLVQAAQMLHADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVECMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRIMLVNSMNTVKDLLPVLISAMKIFVTTKNSRSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAV
RQIIDEAGKVGELCAGKERKDILGTCKTLGQITDQVADLRVRGQGATPVAMQKAQQVSQG
LDLLTAKVENAARKLEALTNSKQAIGKRIDAAQSWLADPNGGPEGEENIRAILAEAKKIA
ELCEDPKDREDILRSLGEIAALTAKLSDLRQQGKGDTPEARALAKQIATSLQNLQTKVNR
AVSNSHPVKAAVNMEGKVEQAQRWIDNPSVDDRGVGQAAIRGLVAEGRRLGNSMMGPFRL
EMLAKCDRVEQLAGQLAELAARGEGDTPHARSVAAQLQDALKDLKSKMQEAMTQEVSDVF
SDTTTPIKLLAVAATSPLDAPNREEVFQERAANFENHAARLGATAEKAAAVGAANKATVE
GIQATVKTARELTPQVVSAARILLCNPGNQAAHEHFETMKNQWIDNIEKMTGLVDEAIDT
RSLLDASEEAIKKDIDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKTASDELTKTISPMVLEAKAVASNISDPALQKSFLDSGYRILGAVAKVREAFQPPE
PEFPPPPPDLEHLRLTDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKVGEVVNQPMM
VAARQLHDEARKWSSKSPGSPAPTTLQGREAVVSEVEQEHEEEEEEEASVEFALSSDIED
DYEPELLLVPEGQPVNQPMLAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRG
GSGNKRALIQCAKDIAKASDEVTRLAKEVAKLCTDKRIRTNLLQVCERIPTISTQLKILS
TVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTEAGFTLRWA
RKTPWYQ
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcttccacaccaaaactatagaaagtatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcatgaagaaggggaggtggacggaaaggccataccagagctg
accgcccctgtggccgctgtgcagtcagcagtcagcaacttggtcagggttggcaaagag
acggttcagacaactgaagatcagattatgaaaagggacatgcctcctgccttcatcaaa
gtagaaaatgcctgtgccaagctggtccaagctgctcagatgctgcatgctgacccatac
tctgtcccagctcgtgattatctcattgatggttcccgtggaatactgtcaggcacttca
gacttgctcttgacatttgatgaagctgaggtgaggaaaatcatcagggtgtgcaaaggt
atactggaatatctgactgtggcagaggtagtggaatgcatggaggatttggttacttac
accaaaaacctgggaccaggaatgacaaagatggcaaagatgattgatgaacgtcagcaa
gagcttacccaccaggaacatcgtatcatgctagtgaattctatgaacacagttaaagat
cttctgcctgttctcatttctgctatgaagatttttgtaacaacaaagaattcccgcagt
caaggtattgaggaagcattaaaaaaccgcaactttacagtggagaaaatgagtgcagag
ataaatgaaattatacgggtattgcagcttacttcctgggatgaagatgcctgggctagc
aagaaggacacagaagccatgaaaagagcactagcactaattgattctaaaatgaatcag
gcaaagggttggttgagggaccctaatgctcctccaggtgatgctggagaacaagctgta
cgccagattatagatgaggctgggaaagttggggagctgtgtgcagggaaggagagaaag
gatatcttgggaacctgtaagactctaggccaaataactgatcaagttgccgatctgaga
gtaagagggcaaggggctacccctgttgcaatgcagaaagcacagcaagtatctcaagga
ttagatctcctaacagctaaagtagagaatgctgctcgaaaattggaagccctaacaaac
tccaaacaggctattggaaagaggattgatgctgctcagagttggcttgcagatcccaat
gggggtccagaaggagaggagaacattcgagccattctggctgaagctaagaagattgct
gaactgtgtgaggatcccaaagaccgagaggacatcctacgttcattgggggagattgca
gctcttactgccaagttgtctgacctccgtcaacagggaaagggtgacacccctgaagca
cgtgccctggctaagcaaattgcaacttcattgcagaatctacaaactaaagtgaaccgt
gctgtaagcaacagccatccagtgaaagctgcagtgaacatggaagggaaagtagagcaa
gctcagcgttggattgacaatccttcagtggatgaccgtggtgttggtcaggctgccatt
cgtggtctagtagctgaaggcaggcgtctaggcaactcaatgatggggcccttccgccta
gagatgttggctaaatgtgaccgtgtggaacaactggcggggcaacttgctgaactggct
gctcgtggtgaaggggatacgccccatgctcgttctgtagctgctcaactccaggatgca
ttaaaggatctgaagtcgaaaatgcaggaggcgatgactcaggaggtgtctgatgttttt
agtgatactaccactcctataaaactcctggctgtggctgctacctccccacttgatgca
cccaacagagaagaggtctttcaagagagggctgccaattttgaaaaccatgcagcacgt
ttgggagccactgctgagaaagcagcagctgtgggagctgctaataaagccacagtggaa
ggcatacaggcaacggtgaagacagccagggagctaacaccacaggtggtttctgcagct
cgcatcctattgtgtaatccgggaaaccaagctgcccatgagcactttgaaaccatgaaa
aaccaatggattgacaatatagaaaagatgacaggtctggttgatgaagccattgataca
agatccctgttggatgcatctgaggaagccatcaaaaaggatattgacaaatgcaaggtg
gctatggctaatatgcagccgcaaatgttagttgctggagccaccagtattgcccgccgt
gcaaaccgcattttattggtagccaaacgagaagtggagaactctgaggatccgaaattc
cgtgaggctgtgaaaacggcatcagatgagctcaccaaaactatttctcctatggtctta
gaggccaaagctgtagctagcaacatctctgacccagctttacagaaaagcttcctagac
tcgggttacaggattttgggagcagtcgctaaggtgagggaagcattccaaccaccggaa
ccagaattccccccacctccacctgatttggaacatctgagattgactgatgaagcagca
ccgccaaagcccccacttcctgagggggaggttccacctcctagaccaccaccacctgaa
gagaaggatgaggagttccctgagcagaaagtgggcgaggtggtaaatcagccaatgatg
gtggctgctagacagcttcatgatgaagctcgcaagtggtccagcaagtcacctggaagc
cctgctcccactactctgcagggtagagaagccgttgtgtctgaggtagagcaggaacat
gaggaagaggaggaggaggaggcgtcagtggaatttgccctttcctctgacattgaagat
gattatgagccagagctgctattagtgcctgaggggcagcctgtaaaccagccaatgctg
gccgcagctcagtctttgcatcgggaggctacaaaatggtccagtaagggcaatgacata
attgcagcagctaagcgcatggctctgctcatggcagagatgtctcgacttgtgagagga
ggcagtgggaacaagagagccctaatccagtgtgccaaggacattgctaaagcttcagat
gaggtgacgaggttggcaaaggaagtggctaaactgtgcacagataagaggatccgaact
aacttgcttcaggtctgtgaaaggatcccaaccatcagcactcagctgaagatccttagt
acagtcaaggccactatgttgggaaggaccaacatcagtgatgaagagtctgaacaggca
accgaaatgcttgtccataatgcacaaaacttaatgcagtcggtgaaagagactgtgaga
gaggctgaagctgcatcaatcaagatccgcacagaagctggattcacacttcgttgggcc
cgtaaaaccccatggtaccagtaa
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