Bufo gargarizans (Asiatic toad): 122942603
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Entry
122942603 CDS
T07965
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgar03016
]
122942603 (TRUB1)
Enzymes [BR:
bgar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
122942603 (TRUB1)
Transfer RNA biogenesis [BR:
bgar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122942603 (TRUB1)
Prokaryotic type
122942603 (TRUB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
122942603
NCBI-ProteinID:
XP_044156210
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All DBs
Position
6:complement(378514685..378522989)
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AA seq
278 aa
AA seq
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MAAEKASRLLSLNGLFPVYKPPGVTSAQTLNDLKSRLLRGQPRGRQAGLKEFTKRKKQTL
KIGHGGTLDSTASGLLVVGVGDGTKMLGAMLTGSKKYITTGQLGKATDTLDASGTVTQEK
PYDHITREELEKALERFTGNTLQVPPLFSALKKNGKRLSCLVRSGAEVEAKPARPVEVYS
LTLTDFRPPLFTLCVECGGGFYVRSLIRDIGEALSSCASVTELVRTKQGPFTLDDDTLRE
DRWDLEHVARALQTSAPPPEQASKRLKTEEDGAPALQS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagagaaagcgtctaggctgttgtcactgaacggtctgttcccggtgtataag
ccgccgggtgtcacgtcagcccagaccctgaacgacctgaagagccgcctgctgagaggt
cagccccggggcagacaagccgggctgaaagaatttacgaagagaaagaagcagacgctg
aaaattggccatggagggaccctggacagcacggcgtccggactgctggtggtcggtgtc
ggagatggtaccaagatgttaggggcgatgctgaccgggagtaagaaatacatcaccacc
gggcagctggggaaagccaccgacaccctggacgcatctgggactgtgacacaagagaag
ccttacgatcacatcactagagaagagttggagaaggcgctggagaggttcaccgggaac
accctgcaggtccctccactcttctccgccttgaagaagaacgggaagaggctgtcgtgt
ctggtgagatcaggggccgaggtcgaggcgaagccggcgcggcctgtggaggtctacagc
ctgacgctgacggatttccggcctcctctctttactctctgtgtggagtgtggaggcggc
ttctatgtccggagtctaatcagagacatcggagaagctttgtccagttgtgccagtgtg
actgagctggtccgcaccaagcagggcccgttcaccctggacgatgacaccctgagggag
gatcgctgggaccttgagcatgtcgcccgggcgctgcagacgtccgccccacccccagag
caagcgtccaagaggctgaagactgaggaggacggggcgcccgctctacaatcctaa
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