Bufo gargarizans (Asiatic toad): 122943156 Help Entry 122943156         CDS       T07965                                  Symbol COL11A1 Name (RefSeq) collagen alpha-1(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism bgar  Bufo gargarizans (Asiatic toad) Pathway bgar04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bgar00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     122943156 (COL11A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bgar00536]     122943156 (COL11A1) Glycosaminoglycan binding proteins [BR:bgar00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122943156 (COL11A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  122943156 NCBI-ProteinID:  XP_044156602 LinkDB All DBs Position 7:complement(136970855..137162129) Genome browser AA seq 1818 aa AA seqDB search MERWNTRWKTKRRLWDSSLSSLILITLTFLFQAAEVRGAGPVDVLRALEFHSTPEGVSRT AGLCANRKATKGSDTAYRVQKHAQLSAPMNQLYPGGAFPKDFSILITVKPKKGLQTFILS LYSQKGVQQLGVEVGRSPVFLYEDQNGKPAPEDYPIFSTVNVADGKWHRIAISVEKNTVT MIVDCKKKITKALPRSDRPVLDTTGIAVFGTRILDEEVFEGDIQQLLIVDDPKAAYDYCE HYMTDCDSPAPNRPQAQDPQVDEYAPEELIEYDYEYGGADYKEPDYVTETPTVAEEYVAQ TEANVVDYLPEQYGEVDYGYQTDTPALTTGPNEKIPEEETLVEEPLVEDPFLEEYITGYD YDSDKKLVEETEYGVKAVEPTQSEPVVGGDLGKDDLYEYTDYEEKATNPTTDEFGPGVPA EKDITETTVNNYGGYGEKGQKGEPAVIEPGMLIEGPPGLEGPAGLTGPPGLQGPSGPPGD PGERGPSGRPGLPGADGLPGPPGTMLMLPFRYSSDGEKGPPISAQEAQAQAILQQARIAM RGPSGPMGLTGRSGPVGSPGAPGIKGESGDSGPQGPRGIQGAPGPMGKAGKRGRPGTDGA RGMPGETGSKGDRGFDGLPGLPGEKGHRGDKGPQGPPGSPGEDGDRGEDGEVGPRGLPGE PGERGLLGPRGTPGPPGQHGVAGVDGPPGPKGNMGPQGEPGPGGQQGIPGTQGLPGPQGP IGPPGEKGPQGKPGLPGLSGADGPPGHPGKEGPTGEKGAVGPTGPQGPIGYPGPRGVKGA DGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEFGPLGPRGEDGPEGPKGRSGPNGDSGP VGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGP RGARGPRGSTGKPGPKGTAGNDGPSGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGH PGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGA KGDPGPAGVSGKDGPPGLRGFPGERGLSGAPGPAGLKGGEGPQGPSGPLGSAGERGAAGT AGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPQGPPGEDGD KGEIGEPGQKGGKGDKGEHGPPGPAGLQGPVGAPGPAGSDGEPGPRGQQGMFGQKGDEGA RGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPSGSIGS PGGLGDKGEPGEAGNPGPPGEAGVSGPKGERGEKGESGPSGAAGPAGPKGPPGDDGPKGN PGPVGFPGDPGPPGEPGPGGVDGGPGDKGEDGESGQPGPPGPSGESGPPGPPGKRGPPGA HGAEGRQGEKGAKGEAGAEGPPGKTGPVGAQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQ DGPPGPMGPPGLPGLKGDPGTKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGTPGSKGD GGISGSGGPNGPPGSPGLPGPQGPKGSKGSSGPAGQKGDSGLPGLPGPPGPPGEVIQPLP IQSPKKTRRSPDGMMADLGDNILDYDGMEEVFNSLNSLKQDIERMKYPEGSQNNPSRTCK DLQLSHPEFPDGEYWIDPNQGCSGDSFKVYCNFTAGGETCIFADKKSEGVRISSWPKENP GSWFSEFKRGKLLSYVDVEGNSINQVQMTFLRLLSASARQNFTYSCHQSVAWHDAVNNNY DKALRFLGSNDEEISYDNSLFIKALHDGCALRKGYARTVLEINTLKIDQLPIADVMISDF GDQNQKFGFEVGPACFLG NT seq 5457 nt NT seq  +upstreamnt  +downstreamnt atggagaggtggaacacaaggtggaaaacgaaaaggaggttgtgggattcatcccttagc tccctaattctcatcactttgactttccttttccaagctgcagaggtcagaggagctgga cccgttgatgtactcagagcattagaatttcacagtacacctgaaggagtgtcaagaaca gcagggctatgcgcaaacaggaaggcaaccaaaggatcagacacagcgtacagagttcaa aaacatgcccagcttagtgccccaatgaaccaattatatccagggggagcattcccaaag gatttctcaatcctgatcacagttaagcccaagaagggcctgcagacattcatcctatct ttatacagtcaaaaaggtgtgcagcaattgggagtggaggtcggcaggtcccctgtcttc ctttatgaagatcagaatggaaaacctgcacccgaggactaccccatttttagcactgtt aatgttgcagatggaaagtggcatcgaattgcaatcagtgttgaaaagaatacagtcaca atgattgtggactgcaaaaaaaagatcactaaagcccttccgagaagcgacagacctgtc ctggacaccaccggcatcgctgtgtttgggacccgcatcctggacgaagaggtgtttgag ggcgatatccagcagctactgatagttgatgaccccaaagctgcgtatgactactgtgaa cattacatgacggactgtgactccccagcacccaataggccccaagctcaggacccacaa gtggatgagtatgcacctgaagaactaatcgaatatgactatgagtatgggggagcagat tacaaggagcctgattatgttacagagacacccacagttgctgaagaatatgtagctcaa actgaggctaatgtggtcgattacctgccagaacaatatggagaagtagactatggttac cagacagatactcctgcacttacaactggacccaatgagaaaattcctgaggaggagaca ttggtggaggagccattggtggaggatccttttctggaagagtacataactggatatgat tatgactcagacaaaaaactggtagaggaaacagaatatggggtgaaagctgtagagcca acacagtctgagccggtggtgggaggagatttaggaaaagatgatttatatgagtacaca gactatgaagagaaagcaacaaaccctacaacagatgaatttggacctggggtgccagca gagaaagatatcacagagaccaccgtgaataattatggaggatatggagagaagggtcag aaaggagaaccagctgttattgaaccaggaatgttgattgaaggaccaccaggactggaa ggaccagcaggtcttacggggcctcctggcttgcaaggtccatctggcccacctggagat cccggcgagagaggtccatctggacgtcctggacttcctggtgctgatggtttacctgga cctcctggcactatgctaatgctacctttccgctattcttcagatggcgagaaaggacca cctatctccgctcaggaagctcaagctcaggctattctccaacaggctcgtattgccatg agaggtccttcaggtccaatgggtcttacaggaagatctggcccagtgggttcacccggt gctccaggaattaaaggtgaatcaggagactcaggccctcagggtcctagaggaattcaa ggtgcacctgggccaatgggtaaagctggcaaacgcggtcgccccggaactgacggagcc cgtggaatgcccggagaaactgggtccaagggtgacagagggtttgacggccttccaggg cttcccggtgagaaggggcacaggggtgataaaggtccacaaggcccacctggatctcct ggtgaagatggagacaggggagaagatggagaggttggacccagagggctgcccggtgaa cctggtgaacgaggattgttgggaccaagaggtactcctggtcctccaggccaacatggt gttgctggtgttgatggtcctccaggacctaaaggaaacatgggaccacaaggtgaacct ggaccaggaggtcaacaaggaattcccggaacacagggtctccctggtccacaaggccca attggcccccctggtgaaaagggaccacagggaaagcctggtttgcctggactgtctgga gctgatggacccccaggacatcccggaaaagaaggaccaactggagaaaaaggcgcagtg ggtccaactggcccccagggtcctattggttatcctggacctcgcggtgtcaagggtgct gatggtgtcagaggattgaagggaggcaaaggagaaaagggagaagatggttttcctgga tttaagggtgacatgggactaaaaggagacaggggagaatttggtcctcttggtccaaga ggagaagatggccctgaaggtccaaaaggaagatctggtccaaatggagattctgggcct gtaggtctagctggtgaaaagggcaaactcggtgtaccaggattgcccggttacccaggc agacaaggtccaaagggatctacaggtttccctggatttgctggagccaatggcgagaaa ggagctcggggtgttgctggcaagccaggtccaaggggacaacgaggtccaacgggtcca cggggcgctcggggtcctagaggttctaccggaaaaccaggtcctaagggcacagcagga aatgatggtccttctggcccacctggtgaacggggacctcaaggaccgcagggcccagtt ggattcccaggaccaaagggcccccctgggcctcctggaaaggatgggctgcctggccac cctggacaacgtggtgaaactggtttccaaggcaaaactggtcccccgggtcctggtggg gttgtaggtccacagggtccaactggagagactggccctattggcgagagaggtcatcct ggacctcctggcccacctggagagcaaggcttacctggagctgctggtaaagaaggtgca aagggagacccaggtcctgcaggagtttctggtaaagatggtcctccaggtttacgtgga ttcccaggagagagaggactttctggagctccaggtcctgctggcttgaaaggtggagaa ggaccacagggcccatctggtccacttggttcagctggagaaagaggagcagctggaact gctggacctattggtcttcccggaagacctggtcctcagggcccccctggaccggcagga gaaaagggagctcccggagagaaaggacctcagggacctgctggccgagatggagtacaa ggacctgtaggacttccaggacctgctggcccacaaggaccacctggtgaagatggtgac aagggtgaaataggagagcctggtcaaaagggtggcaagggagataaaggcgagcatggt cctcctggaccagctggtttgcaaggcccagttggagctccaggtccagctggatctgat ggagaacctggcccaagaggtcaacaaggaatgtttgggcaaaagggtgacgaaggagct cgtggattcccaggtcctcctggtccaattggtcttcaaggtcttcctggacctcctggt gaaaagggagaaaatggtgatgttggtccaatgggtccacctggtccccctggtcctaga ggtcctcaaggtcctaatggtgcagatggtccacaaggtccatctggttctattggctct cctggcggccttggtgataagggtgaacccggtgaagctggaaatccaggtccacctgga gaagctggtgtctctggccctaaaggtgaaagaggagaaaagggagaatctggaccttca ggggctgcaggacctgctggtcccaaaggtccacccggtgacgatggtcccaaaggaaat cccggtcccgttggtttcccaggagatcctggtcctcccggagagcctggtccaggtggt gtagatggtggacctggtgataaaggtgaagatggtgaatcaggccaacctggtcctcct ggaccatctggagaatctggaccaccaggccctcccggcaaaaggggaccccctggtgct catggtgcagaaggcagacaaggagagaaaggtgcaaagggtgaagctggtgctgaggga cctccaggaaagacagggccagtcggagctcaggggccagcaggaaaaccaggtcctgaa ggtctgagaggaattccaggacctgtgggagaacaaggtcttccaggtgctccaggacag gatggacctccaggtccaatgggtccacctggacttccaggtctgaaaggtgatcctggt acaaagggtgaaaagggacatcctggtttgattggtcttattggtccacctggagagcag ggtgaaaagggagacagaggacttccaggtccacagggaacacctggatccaagggtgat ggtggcatatcaggttctggtggccccaatggtcctcctggttctcctggcttgcctggc ccacaaggtcctaagggttcgaagggatcatctggtcctgctggtcagaagggagattct ggtctgcctggacttcctggtcctccgggtccacctggagaagtcatccaaccattacct atccagtcaccaaagaagactcgcagatccccagatggcatgatggctgatcttggagac aacattttggattatgatggaatggaggaggtctttaactccctcaactcactgaaacaa gatatagaacgtatgaagtatccagagggatcacagaacaatccttctagaacatgcaaa gatctccagctatctcatcctgaattccctgatggtgaatattggattgatccaaaccag ggatgctctggagactctttcaaagtctattgtaacttcactgctggaggagaaacttgt atatttgcagacaagaagtcagaaggagtacggatttcatcatggccgaaagaaaaccct ggatcctggtttagtgaatttaagagaggaaagctgctctcctacgttgatgttgagggg aactccattaatcaagttcaaatgactttcctgagactgctcagtgcctctgctcgacag aacttcacctacagctgccaccagtcagtagcctggcatgatgctgtaaacaataactat gacaaggccctgaggttcttgggatcaaatgatgaggaaatatcttacgacaacagcctc tttattaaagccctgcacgatggatgtgcgctgaggaaaggatatgcaagaacagtcctt gaaatcaatacgctgaagatagatcagttgcctatagcagatgttatgataagtgacttt ggggatcagaaccagaagtttggatttgaggtcggaccggcctgcttcttaggttga

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