Bufo gargarizans (Asiatic toad): 122943459
Help
Entry
122943459 CDS
T07965
Symbol
PDZRN3
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122943459 (PDZRN3)
Enzymes [BR:
bgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122943459 (PDZRN3)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
122943459 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-rbx1
Sina_ZnF
RING_XB3-XBAT31
TRAF3_RING
zf-TRAF
TRAF2_zf
Motif
Other DBs
NCBI-GeneID:
122943459
NCBI-ProteinID:
XP_044157157
LinkDB
All DBs
Position
7:complement(202757275..202987259)
Genome browser
AA seq
1055 aa
AA seq
DB search
MGFELDRFIGEVDPDFKCNLCNRVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVKCQRIS
AKELNHVLPLKSLILKLDIKCDNHSRGCDKVVKLQNLGEHAEMCDYSPAKCRNKGCNEVF
NLKDMDAHMRECCEHRAVGICQKGCGLMLTYREQKSGDHCCLKAVKGQNSLLQTKIAGLE
TELKKRALRSSKREKSLLSQLSAVQNELQMTALRYQKKFTEYSARLDSLTKAVASPCKGE
ETTALTLVLHRESGSLGFNIIGGRSCVDNQDGPSSEGIFVSKIVDSGPAAKEGGLQIHDR
IIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMYSPPSDTPMMDMGTQTDIT
FEHIMSLTKINSPSPSVSALNPYLLNEEHSSPHEYFDPNDFMGGLPQDIDRDELELEEID
LYRLNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRIREGDRIIQINGIDVHNH
EEAVALLTSEDTNVFLLVARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASM
LQQKKLDEDGGTTDTATILSNQIEKDSGIGRTDESTRNDESSEQDDHTTSSNTLGSQKKL
MYSQDTLGSGDMQFSNESFISADCTDADFLGIPMDECERFRELLELKCQVQSSSQRSRYY
QTSTMETNRSDQESVDRELEMLNEELHSIELECLNIVRAHKMQQLKEQYKESWMLHNSGF
RNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRTADAA
NCPGVEGAAGSAIYNAAQKNMRSSGESRESSPARHLQQAKDSDPSKPTEVKDKKAIEVGK
SLSEKQSNSFAPPFRHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDF
QNTAETRMEWKVKVRSDGTRYITKRPVRDKLLRERAIKIKEERSGMTTDDDAISEMKMGR
YWSKEERKQHLRKASEQKKRKEFMMQSRLDCLKEKQTAEDNKEVNIIDLSHKKMMKKRNK
KVFDNWMTIQELLTHGARSPDGTRVYNSLLSVTTV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgaattagatcgctttatcggggaagtggacccagattttaaatgcaaccta
tgcaaccgagtgctggaggaccccctgaccaccccctgtggacatgtgttctgcgcaggc
tgcgtcctgccttgggtggtacaacaaggcagctgcccggtgaaatgccaacgaatctct
gccaaggagctcaaccacgtgttgcccctgaagagtctgattctcaagctggatatcaaa
tgcgacaaccactccaggggttgcgacaaggtggtcaagctccaaaacctgggggaacac
gccgagatgtgcgactactcgccagcaaagtgccggaataaggggtgcaatgaggtgttc
aacttaaaggacatggatgcccacatgagggagtgctgcgagcacagggcagttggcatc
tgccagaagggatgcggtcttatgttgacttatagggagcaaaagtccggggatcattgc
tgtttgaaggcggtaaaggggcagaatagccttctccagaccaagatagccgggctggag
actgagctcaagaagagggcgctgagatcaagcaagagggagaagtctctgctgtcccag
ctctctgctgtgcaaaatgagctgcagatgacagcgctcaggtaccagaagaagttcaca
gagtacagtgccaggctggactctctcaccaaggcagtggcctctccttgcaagggagaa
gagacgaccgcactcactctcgttctccaccgagaatctggatccctgggatttaatatt
attggtggccgctcgtgtgtggacaaccaagatggaccctccagcgaaggaatttttgtt
tcaaaaatagttgacagcggcccggctgccaaggaaggcggactccagattcatgacagg
attatcgaggtaaatggaaaagacttatcaagagccacgcatgaccaagcggtggaagcc
tttaaaacagccaaagaacccatcgtggtgcaagttttacggagaacccctcgcacaaag
atgtacagccccccctccgacaccccgatgatggacatggggacacagactgacataacc
ttcgagcacatcatgtctctgaccaaaataaactctccgtctccgtcagtgtctgctctg
aacccctatctcttaaatgaagagcattcatcacctcacgaatattttgaccccaacgac
ttcatgggaggtttgcctcaagatattgacagagatgagttagaattggaggaaatagac
ttgtacagactgaacagccaggataagctggggctgacggtgtgctacaggacggatgac
gaggacgacatggggatttacgtcagtgagatcgatcctaacagcattgccgctaaagat
ggacgaatcagagaaggagatcggataatacagattaacggcatcgatgttcacaaccat
gaagaagccgtcgccctcctgaccagtgaagacaccaatgttttcttattagtggcccgg
ccagaactacagctggatgaaggatggatggacgacgacagaaatgatttcctggatgat
ttacacatggacatgctggaggagcagcaccaccaagcaatgcaatttacagccagcatg
ctccagcagaaaaaacttgacgaagatggaggaaccacggacacggcaaccatattatcc
aaccagattgagaaggacagcggcattgggcgcacggatgaaagcactcgcaacgatgag
agttcggagcaggacgatcacacaacgtcctcaaatactcttggcagtcagaagaaactc
atgtacagtcaggacactttggggagcggagacatgcagttcagcaacgagtccttcata
tctgcagattgcacggatgctgacttcttgggcatccccatggatgagtgcgagagattc
cgagagctcctcgaactcaagtgccaggtgcaaagctcttcgcaacgcagtagatattac
caaaccagcaccatggagaccaatcggagcgaccaggagagtgtagaccgggaactggag
atgttgaacgaagagttgcacagcattgagcttgagtgtttgaacattgtacgggcacac
aaaatgcagcagctaaaagagcaatacaaagagtcctggatgctacacaatagcggtttc
cgaaattacaacactagtatcgatgtccgccgccacgaactttccgatatcaccgaactg
ccagaaaagtcagacaaggacagctcaagtgcctacaacaccggggaaagctgtcgtagc
acccccctgactttagagatttcccctgacaactcattacgtaggacagccgacgctgcc
aactgcccaggtgtcgagggggcagcgggtagtgccatttacaatgcagcccagaagaat
atgagatcaagcggagagagtcgagagtccagcccggcgagacaccttcaacaggccaag
gactccgatccaagcaaacccacggaagtcaaagacaaaaaagccatcgaggtaggcaaa
agcctctcagagaagcaatctaactcctttgcgccaccgtttcggcactccccttataaa
cacgcccacatccccgcccacgctcagcactatcaaagctacatgcagcttatccaacaa
aaatcggcggtagagtacgcccaaagccaaatgagtttggtcagcatgtgtaaagacttt
cagaacacggcagaaaccaggatggaatggaaagtgaaggtacggagcgatgggacgcgt
tacatcacgaaacgaccagtccgagacaagttgttgagagaacgtgccatcaagatcaag
gaagagaggagcggcatgacgacggacgacgacgccattagcgagatgaaaatgggacgt
tattggagcaaagaggaacggaagcaacatctccgcaaggcttcagagcagaagaaaaga
aaagagttcatgatgcagagcaggctggattgtctcaaggagaaacagacggccgaagac
aacaaggaggtcaacatcatcgacctcagccacaaaaagatgatgaagaagcgcaacaaa
aaggtttttgacaactggatgacaatacaagaactgttaacacacggtgcgaggtctccc
gatggtacgagggtctacaactccctgctctccgtcacaactgtataa
DBGET
integrated database retrieval system
