Bufo gargarizans (Asiatic toad): 122943763
Help
Entry
122943763 CDS
T07965
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar02010
ABC transporters
bgar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122943763
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122943763
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bgar02000
]
122943763
Transporters [BR:
bgar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122943763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
122943763
NCBI-ProteinID:
XP_044157704
LinkDB
All DBs
Position
7:complement(199501217..199611413)
Genome browser
AA seq
2308 aa
AA seq
DB search
MRGLSSEEPAPWAQVNEQPNVSGTASSSARAAEVKQCELSGRRKMTYCTQLGLLLWKNFT
YRRRQTLQLLVEIAWPLFIFFILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICN
TNNPCFRYPTPGESPGIVGNFNRSIVSRLFSDARKLLLYSRKDTSGKDLHKFLTNLHRFR
GTGMKLGDCLMDNEKFTTFLQQNISMPSIVVEEILNADLKVEQVLISGFQIRLKDLCNSS
RLEEYVTIHNEEVAKFSQSVICALPEDKLNLLEHQFRSNIDLLKPITKEMSSKSFPMLRE
VTENMLHSMGDLAKEVIGMKSWADMRQEVMFLTSVNSTASPTSLYQAVSRIVCGHPEGGG
LKIKSLNWYEDDNYKALFGGTEGGENGTEEESSSIYDNSTTPYCNELMVTLESSPLYRMV
WRALKPLLIGKILYTPNTPATRMLMSEVNKTFQELGVFRDLGAMWEEVRPQIKTFLESSK
EMDLIRTLLTNKGSKHFLDRQLNSTGWTSEDIARFLAKESVGQSEGETLYTWREALNETD
RVVLTMSRFMECVNLDKIEPVDNEEILIDTSMLLLNERKFWAGVVFVDLPEDDTVLPQHI
KYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYIWGGFAYLQDVIEQAIIRVQTGTE
KRTGVYVQQMPYPCYVDDIFLRVMSRSLPLFMTLAWIYSVAVIIKGIVYEKEARLKETMR
IMGLDNGILWLSWFISSLIPLLMSAGLLVLILKTGNLLPYSDPSVVFVFLSVFGVVTISQ
CFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIFASFLSPVAFGFGCE
VFALFEEQGVGVQWSNLLDSPLQEDGYSLTTSSFMMLFDTLLYGVMTWYIEAVFPGQYGI
PRSWYFPFTKSYWCGEESKQIHHNSSLQRESSEVCMEEEPGHLSLGVSIQNLVKIYRDGK
KVAVDGLSLSFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRTELNSIR
QNLGVCPQHNVLFDILTVEEHIWFYARLKGLSEEKVKTEMEQIINDVGLPNKKKCKTSQL
SGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWDLLLKYRQGRTIILSTHHMDE
ADILGDRIAIISQGKLCCVGSSLFLKNQLGTGYYLTLVKRDADSSLSSCRNSSSTMSCLK
KEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLINKHVPEARFVEDIGHELTYVLPYEAA
KEGAFVELFHEIDDRLFDLGISSYGISDTTLEEIFLKVANDTGVDTETSDGTLPARRKRY
AFGDHQSCLRPFTEDDNLETNDSDLDPGSRETDYLSGIDGKGSYQMKSWSLMRQQFTALL
WKRLLYARRSRKGFFAQIVLPAVFVLIALLFSLIVPPFGKYPSLELQPWMYDEQFTFFSN
DAPEDSGTQALIKALLEKPGFGTACMDGYSIPGVPCSGEDLEWRTQFVPESVEEIFXNGN
WSMENPSPACECSNKNVKKMLPVCPPGAGGLPPFQKKLNSSVVLQNLTGRNISDYLVKTY
AQIIGKSLKNKIAVNEFRYGGFSLGASSTPVFPPSEDVLASIKHIKKQLDISKNGAANRF
LDSFGTFMKGLDAKDNVKVWFNNKGWHAISAFLNVMNNAILRSKLPEGKDAAKYGITAVN
HPLNLTKEQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQCISGV
KPVIYWLANFVWDMCNYIVPATLVIIIFICFQQDSYVSSSNLPVLALLLLLYGWSITPLM
YPASFIFKIPSTAYVVLTSINLFIGINGSVATFVLELFTNNKLNNINDILKSVLLIFPHF
CLGRGLIDMVKNQAMADALERFGENRFVSPMSWDLVGKNLFAMAVEGVVFFVITLLIQYR
FFIKPRPVTAKLPPVIDEDEDVARERQRITNEGGRSDILEIKGLTKIYRMKRKPAVDRLC
VGIPPGECFGLLGVNGAGKTTTFKMLTGDTDVTAGEAFLKGHSILSDMQEVHQNMGYCPQ
FDALNELLTGREHLELYALLRGVPDKEVCKVAEWAVQKLGLVKYSDKCAGSYSGGNKRKL
STAIALIGGPPVVFLDEPTTGMDPKSRRFLWNCALSVIKEGRSVVLTSHSMEECEALCTR
MAIMVNGRFRCLGSVQHLKNKFGDGYTIIVRITGANPDLKPVEDFFSHAFPGSVLKEKHR
GMLQYQLCSSQSSLARIFSILSNNKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDLLKDL
SLHKNQTVVDMSVLTSFLQDEKVKESYV
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atgagggggctttcttctgaggagccagcaccctgggcacaagttaatgagcaacccaac
gtctctggtactgcaagctcttctgcccgagcagcagaggtgaagcagtgtgaactctca
gggagaaggaagatgacttactgtactcaactaggactgctcctctggaagaacttcacc
taccggcggaggcagactttgcagctgctggttgaaatagcttggccactcttcatcttc
ttcattctgatctctgtacgactttcttatccaccttacgaacagcatgaatgccatttc
cccaacaaagcaatgccctctgccggcacactgccgtgggtacaggggattatttgcaat
accaataatccatgttttcgatacccaacaccaggggagtctccaggaattgttgggaat
ttcaataggtccatagtttctcgattgttttctgatgcaagaaaattgctgctatacagt
cgaaaagacacaagtgggaaggacttgcataagtttctgacaaatttgcatagatttcga
ggtacaggtatgaaacttggggattgcctaatggataatgaaaaattcacaacttttcta
cagcaaaacataagcatgccttccatcgtggtggaggaaatactaaatgctgatctcaaa
gtggagcaggttctgatatctggatttcaaatacgcttgaaagatctgtgcaatagctct
agattggaggagtatgtgaccattcacaatgaagaggttgcgaaattcagccagtcggtg
atatgtgcgcttcctgaagacaagctcaaccttttggagcatcagtttcgctccaacatt
gaccttctcaagcccatcactaaagaaatgtcatcaaagtctttccccatgctaagagag
gttacagaaaacatgctgcacagcatgggagatcttgccaaagaggttattgggatgaag
agttgggctgacatgaggcaggaggttatgttccttaccagtgtgaactctacagcttca
ccaacctccctatatcaagcagtgtcccgaattgtatgtggtcatcctgagggagggggt
ctaaagatcaagtccctcaactggtatgaagatgacaactataaggcactatttggagga
accgaaggaggagagaatggcacagaggaagagtcctcatccatctatgataattctaca
actccttattgcaatgagctgatggtgaccctggagtccagccccctgtacaggatggtc
tggagagcactgaaaccattacttatcggcaaaatcctctatactccaaacacaccagcc
acacgtatgttaatgtcagaggtcaataaaactttccaagagctgggtgtgtttcgagat
ctcggagcaatgtgggaagaagttcgtccacagatcaaaacgttcctggagagcagtaaa
gagatggatcttatcaggactctgttgaccaataagggcagtaaacacttcctggatcgc
cagctaaattcaacaggttggacatcagaagacattgcaagattcttggccaaagaatcg
gtaggacagtctgagggtgaaaccttgtacacctggcgagaagcactcaatgagactgac
cgtgttgtgctgaccatgtcacggttcatggagtgtgtcaatctggacaagatagaacca
gtggataatgaagaaattcttattgacacgtccatgttgcttctaaatgaaaggaagttc
tgggcaggtgtagtttttgttgacttgccagaagatgatactgtactacctcaacacatc
aaatataaaatccgaatggacatcgataatgtggagagaaccaacaagattaaagatggt
tactgggatccaggtcctcgtgctgatccatttgaagatatgcgctatatctggggtgga
tttgcctatctacaggatgtcattgaacaggcaatcattagagtacagactggcacagag
aagaggacaggagtatatgttcagcagatgccctatccttgttacgtagatgacatattt
ttacgtgtcatgagtcgatccctgcccttgttcatgacattagcttggatctattctgtt
gctgtgatcattaagggaattgtatatgaaaaagaggctcgtctaaaagagaccatgcgg
atcatgggactggacaatggcattctgtggctcagttggtttataagcagcctcattcca
cttcttatgagtgcggggctgttagtgttgatccttaagactggaaaccttttgccatac
agtgacccaagtgtggtatttgtcttcttgtcggtctttggagtagtgaccatctcccag
tgtttcctgataagcaccattttctccagagccaatttagcagcagcctgtggtggcatc
atttactttacactttacctaccctatgtactttgtgttgcgtggcaagactacgtgggc
ttcactctcaagatttttgctagcttcttgtcacctgtcgcatttgggtttggttgtgag
gtatttgcactgtttgaagaacaaggagttggtgtacagtggagcaatctgttagatagt
cctctgcaagaagatgggtacagtctaactacgtcttccttcatgatgctgtttgataca
cttttgtatggagtgatgacttggtatattgaagccgtctttccaggccagtatggaatt
cccagatcttggtatttcccattcacaaagtcttattggtgtggagaagaatcaaaacag
atacatcataacagttctttacagagggaatcatctgaagtttgcatggaggaagaacct
ggtcatctttcactaggagtctccattcagaatctggtaaaaatttaccgagatggaaag
aaagtggccgtggatggcttgtcactaagcttctacgaaggacagatcacatcatttctg
ggacataatggagctggaaaaactactactatgtccatattaacaggcttgttcccacca
acctctggaactgcctacatcttgggaaaagatattcgcactgagctcaactctattcga
caaaatttgggagtttgtcctcaacataacgtcctctttgacatactcactgttgaagaa
cacatctggttttatgcacgactgaaagggctttctgaagaaaaagtaaaaacggagatg
gaacagattataaatgatgttggcctccctaataagaaaaagtgcaaaacaagtcagctg
tcaggtggtatgcagagaaaactctctgtagccttggcttttgttggtggatcaaaggtt
gtcatccttgatgagcccacagccggcgttgacccatattcacgaagaggcatttgggat
ctgctacttaaatacagacaaggaagaacaattatcctttccacacatcacatggatgag
gctgatatcctgggagatcgaattgctataatctcacaaggcaaattgtgctgtgtagga
tcttctctgttcctgaagaaccaactaggcactggctattaccttacattagtgaagagg
gacgcagactcctcccttagctcctgccggaacagcagcagtacaatgtcttgcttgaaa
aaggaggatagcgtctctcagagcagttctgatgctggactgggcagtgaccatgaaagt
gatactttgacaatagatgtctctgccatttcaaacctcatcaacaaacatgtccctgaa
gcccgctttgtagaagatattggccatgaacttacctatgtcttgccttacgaggctgca
aaagaaggtgcatttgttgagcttttccatgaaattgatgatcgtttgtttgaccttggc
atctccagctatggcatctcagataccactcttgaagagatattccttaaagtggctaat
gacacaggagttgatacggagacatcagatgggacactacctgccaggaggaaaagatat
gcttttggagaccaccagagctgtctacgacctttcacagaagacgacaatctagaaacc
aatgattctgatttggatccaggatcgcgagagacagattatctcagtggcatagatgga
aaagggtcctaccaaatgaaaagctggagcctgatgagacagcaatttacagccttactt
tggaagaggttactctatgccaggcgcagtagaaaaggcttctttgcacagattgtgtta
ccagctgtttttgtgctcattgcactgctgtttagccttattgtgccaccttttggaaaa
taccccagccttgagctccagccctggatgtatgatgaacaatttacctttttcagcaat
gatgccccagaggactctggcacacaagctcttataaaagctttgctcgaaaagcctggt
tttggaacagcatgcatggatggatattctattccgggtgttccttgctcaggggaggac
ttagaatggaggactcagtttgtcccagagtctgtggaagagatttttnctaatggcaat
tggtcaatggaaaacccttctccggcctgcgagtgcagtaataaaaatgtcaagaagatg
cttccagtttgtcctcctggggctgggggcctaccaccttttcagaaaaagctaaattct
tcagttgtcctgcaaaacctgaccggaaggaacatatcagattatctagtaaagacttat
gctcaaattattggaaaaagcttaaagaacaagatcgcggtgaatgagtttcggtatggt
ggtttctcccttggtgcaagtagcaccccagtatttccaccaagtgaagatgttttggcc
tccattaaacacatcaagaaacaactcgacatctcaaagaatggggctgctaaccgtttc
cttgatagctttgggacatttatgaaaggactcgatgcaaaagataatgtgaaggtgtgg
tttaataacaaaggatggcatgctatcagcgctttccttaatgtgatgaacaatgccatc
ctccgctccaaactacctgagggaaaggatgctgccaaatatgggattacagccgtcaat
catcctttaaacctcaccaaagaacagctatcggaggttgcactgatgactacgtcagta
gatgtcctggtttccatctgtgtcatttttgcaatgtcatttgtgccagccagctttgta
gttttcctgatccaagagagagtgagcaaagccaaacatttgcagtgtattagtggagtg
aagcctgtgatctactggctggccaactttgtgtgggatatgtgtaactacattgtgcca
gcaacattggtcattataatattcatctgcttccagcaagactcctatgtatcgtcttcc
aatttaccagtgctggcacttttacttttgttatatgggtggtccataactcctctgatg
tacccagcatcctttatctttaagatccccagcacagcctatgtggtgttaacaagcatc
aatcttttcattgggatcaatggcagtgtggccacgtttgtacttgaactttttacaaat
aataaactaaacaacatcaatgacattttgaagtcagtgctgctcatcttccctcatttc
tgtcttggaagaggactcatagatatggtgaagaatcaggccatggctgacgctctagaa
agatttggagaaaatcgctttgtctctcctatgtcctgggatctggttggaaaaaatctc
tttgccatggctgtagaaggagtggtgttttttgtcataactctgctgattcagtaccgc
tttttcatcaaaccaaggccagtgactgcaaagcttcctccagtaattgacgaggatgaa
gacgtggcgagagagaggcagaggataacgaatgaagggggtcggagtgacatcttggaa
atcaaaggattgacaaagatctacagaatgaaaagaaagccagctgtagatagactgtgt
gtgggaatacccccaggagagtgtttcggcctgcttggggttaatggcgctggtaagact
actacatttaagatgctcactggagatactgatgtgactgctggagaagccttcctgaag
ggacacagtatcttgtctgatatgcaagaagtccatcagaatatgggttactgtcctcag
tttgatgccctcaacgagctgctgacaggccgggagcatctggaattgtatgcccttttg
cgtggggtgcctgacaaggaggtttgcaaggttgctgaatgggctgtgcagaagctaggc
ttagtgaaatactcggacaaatgcgcaggatcctacagtggaggaaacaaacgtaaattg
tctacagctattgccttaataggaggaccgccagtagtatttctggatgaaccaaccaca
ggaatggatcctaaatcaaggcgcttcttatggaactgtgccctgagcgttattaaagaa
ggaagatccgttgtgttaacttcacacagtatggaagaatgtgaagctctctgcacaaga
atggctataatggtcaatggcagattcagatgcctgggaagcgtacaacatctaaaaaac
aagtttggtgatgggtataccatcatagtgaggataaccggagcaaaccctgatttgaag
cctgtggaggactttttcagccatgcttttccagggagcgttttaaaagagaaacataga
ggaatgctgcagtaccagctgtgctcttcacagtcctccttggccaggatcttcagcatc
ctttccaataacaagaaaagacttcacattgaagattattcagtctctcagaccactctt
gaccaagtgtttgttaattttgccaaggaccaaagtgatgatgatcttttgaaggacttg
tcattacacaaaaaccagactgtagtagatatgtccgtcctgacatcttttcttcaggat
gagaaggtaaaagaaagctacgtgtga
DBGET
integrated database retrieval system
