Bufo gargarizans (Asiatic toad): 122943962
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Entry
122943962 CDS
T07965
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122943962 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122943962 (NDC1)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122943962 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
122943962
NCBI-ProteinID:
XP_044158059
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Position
7:55034546..55069355
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AA seq
657 aa
AA seq
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MTGIGERKVLRWRVAASLSWVVILLPLSCLAFICLSKFHIFHPAQCLTDAIKDTLSSSTV
FCLLLLCILQVIECAFNVQFHSVVPSIASSRLSLIGLILLPQHVLHSVVHAFMGVLVFWC
CTVLGQSPHQGLAVPCSLDPSSDEASSQAMCLNERYLFLLLTGGFMGYSYSLLYFIHNMN
CLSFPSVQQFKYLQFRQSVPRLLKHCCVQSLYLARNFTAVYFFLGYIPRKWVQAVLNLQM
NPHLPPLDTLRGLFDLSLFYQMWLSGVFLLTTWCIAWLLFKIYTTEARVFPVQTAFPEEA
AKCLPNMLSCNFPLLRYLAFQDVMLLSQYSPSRRQEVFSLSQPGGHPHNWVAISRECLGV
LNNLTSRLVAYQEAAASNGRLRPSSSSSSSSGASFINDTVDPSPNVVPTPRTPIPLLLKP
GASLKAAWDSGSPFASPAVGRIAGVMDQNSPWHGSVQSPHVVRRGAKLWTCDQDIQRNGS
EVSPTRKASTGPASSNGQRILYAWLQNIKEQIRHFMSKRVLFMYLFSKHPDASSQELFAD
SQIHIWGLEALSYLVAASFLEDRMGVVQTTLSTILATFLTLQEAVEKHFKLPHVSSKPAR
PASGLVDSSYKTQRFAVRSALKTAIYRITTTFGEHIHAVPVSSEHRKKLQQFLDFKE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgactgggatcggagagagaaaggtgttgagatggagagtggccgccagcctttcgtgg
gtggtcatcttgttacccctgagctgcttggccttcatctgtctgagcaaattccacatc
ttccatccagcacaatgcctgacagatgccataaaggacacgctcagcagttccaccgtc
ttttgcctgctgctgctatgtatactgcaggttattgaatgtgctttcaatgtgcagttc
cattcagtggtgccttccatcgccagttcccggctctccttgattggactcatcctgctt
ccccagcatgtgcttcactctgtcgtgcatgcctttatgggggtgctggtgttttggtgc
tgcacagtcctgggtcagagtccacatcagggcttggccgttccgtgcagtctagacccc
agcagtgatgaagccagcagccaggcgatgtgcctgaatgagcgttacctcttcctgctg
ctgactggaggcttcatggggtatagttacagcctgctgtattttattcacaatatgaat
tgcttgtcttttccatcggtgcagcaattcaagtatttgcagttccgccagagtgtcccg
aggcttctgaagcactgctgtgtccagtctctgtacctggcccggaatttcaccgctgtc
tatttcttcctgggttatattccacggaaatgggttcaggccgttctgaacctccaaatg
aatccacatttgcctccactggatactcttcgtggactttttgacttgtcactattttac
cagatgtggctgtctggcgtgtttcttctcaccacctggtgtattgcatggctgctcttc
aagatctacactacagaggcccgcgtgtttcctgtgcagactgcttttcctgaagaagca
gcaaaatgtctcccaaacatgttgagctgtaattttccactactaaggtatctggccttc
caagacgtgatgcttctctctcaatattctccgtctcgaagacaagaagtgttcagcctc
agccagccaggaggacatcctcacaattgggtcgctatctctagggagtgcttgggtgtc
ctaaacaatttgacatcaaggctcgttgcttatcaggaagctgctgcaagtaatggacgc
ctcagaccctcatcgtcttcttcaagcagctcgggagcatcttttattaatgacactgtt
gacccttcaccaaacgttgttccgactccccggaccccgatccctttactgctgaagcct
ggtgcctctctcaaagcagcgtgggactctggtagcccttttgcgtctcctgcagttggt
cgcatcgctggtgtcatggaccaaaattcaccgtggcatggatctgtacagagtccccac
gttgtgaggagaggtgcaaagctgtggacgtgtgaccaagacatccagaggaatggctca
gaagtttctccgacccgtaaagccagcactggccctgccagcagcaatgggcagcgtatc
ctgtatgcatggctccagaacataaaggagcagatcagacatttcatgtcaaaacgagtt
ttgttcatgtatctgttcagcaagcatccagacgcctctagtcaggaactgttcgctgat
tcacagatccacatttggggtttggaagctttgtcttatctagtggcagcttccttctta
gaagacaggatgggagttgtacagactaccctctccaccatactggccacatttcttact
ctgcaagaggctgtagaaaagcattttaaacttccacatgtctccagcaaaccagccaga
cctgcatcgggtttagtagattcttcttacaagacgcaaaggttcgctgttcgatccgcc
ctgaagacagcgatctacaggataaccacaacgtttggggagcacatacatgctgttcct
gtctcttcagaacatcggaaaaaactgcagcaattcctagactttaaggaataa
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