Bufo gargarizans (Asiatic toad): 122944477
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Entry
122944477 CDS
T07965
Name
(RefSeq) partner and localizer of BRCA2-like
KO
K10897
partner and localizer of BRCA2
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03440
Homologous recombination
bgar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122944477
03460 Fanconi anemia pathway
122944477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122944477
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
122944477
FA (Fanconi anemia) pathway
Downstream FA components
122944477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
TSNAXIP1_N
Motif
Other DBs
NCBI-GeneID:
122944477
NCBI-ProteinID:
XP_044158722
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Position
8:178628209..178680814
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AA seq
1234 aa
AA seq
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MENAPEKPLTLEEKTKLKERLALLKKEYKKTVHRLQRSQRAQRVKTHVKKTIEEQNRLLS
QELSIQDSVFILAGSLVDASNASRKATESTQSIVTPSAERKPSVSFNLDPEILHCDKKSP
SWSGSESSCQEPGVASKTETTGLSNPNQGKRSRLKLNRSARQAFSEAISPRVQVNSSASN
LEEKRNNEVETTRDSALCLTADVTPQINEATFNSESTRRVQVTPECENDLGVNVLVQQHN
NMEATSSPASPVFTKCLKEDIKLSSEHIAYLYPGEKVTLDTGQPKVATEHSQDRRRNNSM
HRGKEPAHSHTNIQQRLTSEQISSVTKLLGDTSQDLTLDATCNFPPIPYIMETSSTSPPC
SENHSVPTAKYHGEPSGFKEECSPLDSCTLVEGLLFPVEYYVRTTRRMTSCQRKVDLEAV
INSHLGTARKGAKSGPRQASTSLTPSLQVSGASLSIPSHSAARSRRVRGRKSCPASVSSG
LDNISKKLTFGSSTSPIADGFQGVKETIEAKELCIETCAEGLKKLEDVTLPSEGRRRTPD
DGNLGLHALPNNTNILQRCVYNLRTSAKTSEPSSPFFLFSSGLNLKHLMGHVDITDFHLP
DEDFGVLKLEKLKSASQLDPRSTNEKERYRGAYSIDGSTRPVGDYSALLHGAVGGCTDAS
QRNSKLTLEGCPNDNQAQRDGTTSYIFLTRATPEVFHLSPSKEKTCAPGCPVSCPLQQAP
LGSYSNVDVSKHFSDPELSTPAPNANCVETSSTNMESAIAGTSEPPPSVLSSTKEVACSV
LLSTSMCSVPVDTHGECRLSGCTPGFPMLGPTPAVFSSPQCSTIPAPCEDRTPTRTVEFP
PEEDLVTQDDVETDPYSELLIPPSGDHVCIEKKACSHPGHETNESDQHNMEGMLEGDHIH
LVSEIKDTCGGGCPVDLCSVWWEFSGCVDLCIVSASEFSVCLWRPQEVFIWKCVHTWSFS
EMPVIQILPLFQEKNMVCIALGNLDIMEIWVLSSHPELQTWEKQLVKRGHTKTAQGLSRH
RVVSSSGGGGSQAVELWQLSESGSVAGSHALVAPNDSIVAFSEVDGERDALVGSTVDNNL
VLWNSVTGHLLSTFYIGNLCSDLTCISAASDSGLLFLVVGSLFSKPCEVTGSCIFKLIAT
NPQGGASAFIMAYKLPEGLSSRYLEGDVKNQRAAAVLTCGSIALWDLSRSHCSAVLPPDP
DTPWCLVRWGNRPSCLLAGRKDGTICIFEYSDRS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcgccagagaaacctctcactttagaagaaaagacaaagctgaaggaaagg
ctcgccttactgaagaaagaatacaagaagaccgtccaccgcttacagagatcccagaga
gcccagagggtgaaaacacacgtcaagaaaaccatagaagagcagaaccggttattaagc
caggaactgtccatacaagacagcgtcttcatattagcaggttctctggttgacgccagt
aatgcttctagaaaagccaccgagtcaacgcaaagcatcgtcaccccatcagcagaaagg
aagccgtccgtaagctttaatttggatccagaaatcctccactgtgacaagaagtcacct
tcatggtctggaagcgaaagtagctgtcaggagcccggcgtagcaagcaagactgagact
accggattgtctaatccaaaccaaggcaaaaggagccggctgaaactaaatagatccgca
aggcaagccttctcagaggccatatccccgagagttcaggtcaatagtagtgcgagtaat
ctagaagaaaagcgtaataatgaggtggaaactacaagggactcagcgctgtgccttaca
gcagatgttacaccgcagataaatgaggccactttcaattcggagagtacaagacgtgtg
caagtgactcctgagtgtgagaatgaccttggtgtgaatgttcttgtacagcagcataat
aatatggaggccacaagttctccggcgtcacctgtgtttacaaagtgccttaaggaggat
ataaagctttcctcggagcatatagcttatttataccctggggagaaggttacactagat
actgggcaacctaaagtagccacagaacattctcaggatcgtagaagaaataacagcatg
catagaggtaaggaaccagcacatagtcacactaatatacagcagaggctgacgagtgaa
cagatatcctccgtaacaaagcttcttggggacacctctcaggatctgacattggatgcc
acctgcaattttccaccaatcccttatattatggagacatcatctacttctcccccctgc
tctgagaaccattcagtgccaacggccaagtaccatggagagccatctgggtttaaggaa
gagtgcagcccactcgactcttgcacgttggtggaaggacttttattcccagttgaatat
tatgttaggacaactcgccggatgaccagctgccaaagaaaagtggaccttgaggcagta
atcaacagccacctgggcacggccagaaagggggcaaaaagtggacctcgtcaggcaagc
acctccttaactccttccctgcaggtcagtggcgcttctttaagcatccctagccacagc
gctgcaagatccagacgagttagaggtaggaaatcatgtcctgcttcagtgtcttctggc
ctcgacaacatatcaaagaagctaacatttggttctagcaccagcccaatagcagatggt
tttcaaggagtaaaagaaaccattgaggcgaaagaactgtgcatcgagacttgtgcagaa
ggtttgaagaaattggaggatgtcaccctgccatctgagggaaggagaagaacaccggat
gatggcaaccttgggttacatgccttacctaacaacacaaacatattacagagatgtgta
tataacctcaggacctcagcgaagaccagtgagccaagctcgcccttttttctgttcagc
agcggactaaatctgaagcatctcatgggccatgtagacatcaccgacttccatttgccc
gatgaagacttcggagtcctcaaactggaaaagctgaaatctgcaagccaactggatccg
aggtcgaccaacgaaaaggagaggtacaggggggcctatagcattgacggctcaacaagg
ccagtcggtgactactcggcactgctacatggagcagtggggggctgcactgatgcgtct
cagagaaactcaaaactgacactcgagggctgcccgaatgacaaccaagctcaacgagat
gggacgacatcttatattttccttactagggcgacaccggaggtatttcatctctcgccc
tcaaaagagaagacttgtgcccctggttgtccagtcagctgtccccttcagcaagccccc
ctaggttcttattctaatgtggacgtatccaagcatttctcagaccccgagctcagcact
cctgcgcctaatgcaaattgtgtggaaacatcaagcacaaatatggagtctgccatagca
gggacctctgagccaccacccagcgtcctgtcttctacaaaagaagtggcttgtagtgtc
ctcctgtcaacctcaatgtgttctgtccctgtagatactcatggggagtgtaggctctcg
gggtgcacacccggcttccctatgttagggccaacgcccgccgtcttctcatccccgcag
tgcagcactattcctgcaccttgtgaggatcgcacgcccacaagaacagtagaattccct
ccagaggaggatttggtcacacaagatgatgtagagactgatccgtacagtgaattatta
atacccccatcaggggatcacgtgtgtatagagaagaaagcttgtagtcacccaggacat
gagaccaatgaatctgatcaacataacatggaagggatgttggaaggtgatcatatccac
cttgtctctgaaattaaggatacctgcggtggtggatgtcctgtagatctgtgctctgtt
tggtgggaattctctggctgtgtagatctctgtattgtgtcagccagtgagttctctgtc
tgtctttggagaccacaagaagttttcatatggaaatgcgtccacacctggagtttctca
gagatgccggttatccagattcttccgttgtttcaagagaagaacatggtgtgcatcgct
ttgggaaatctagacattatggagatctgggtgctgtcttcacatccagagcttcagacc
tgggaaaagcagttggtcaagcgtgggcacacaaagactgcccagggtctgtcccggcac
cgtgtggtcagcagcagcggaggaggaggcagtcaggcggtggagctctggcagctatca
gaaagcggaagtgtggctggttctcacgctctggtggcccctaacgacagcatcgtggct
ttctcggaagtggatggcgagagggacgctctggttggatctaccgtggacaacaatcta
gttctctggaattcagtgaccggacatctcttgagtacgttttacatcgggaatctttgc
tctgacctcacatgtataagtgcagcatcggactcgggtttgttgtttttagtcgttggc
agcctgttcagcaaaccctgtgaggtcactggtagctgtatattcaagctgatcgccacc
aacccccaggggggagcgagtgcttttattatggcctacaagctaccagagggactcagt
agcagatacctggaaggtgatgtgaagaatcaaagagcggctgccgtattgacttgtgga
agcattgccctctgggatttatccagaagccattgctctgctgtgctccctccagacccc
gatacaccctggtgtctggtacgatggggtaacaggccatcttgtttacttgccggacgt
aaggatgggaccatctgcatttttgaatattcagaccggagttga
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integrated database retrieval system
