Bufo gargarizans (Asiatic toad): 122944483
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Entry
122944483 CDS
T07965
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122944483 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122944483 (PRPF40A)
Spliceosome [BR:
bgar03041
]
Complex A
U1 snRNP components
U1 related factors
122944483 (PRPF40A)
Complex B
122944483 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
DTW
DUF4936
Motif
Other DBs
NCBI-GeneID:
122944483
NCBI-ProteinID:
XP_044158738
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All DBs
Position
8:complement(57601738..57640347)
Genome browser
AA seq
923 aa
AA seq
DB search
MYHDDWSYRFAAAVASGDGTNGPSQPGLYPNGSRMMRAQFMSPVAHYPSVGMGGLPPRPG
LAPPGMIPPLLGPMGAHPMGPMAPMIPSLMSGMMMTTHVAPGTLPTLPAGMPPGLDPTLG
QPPVAPSPLPVISAPPSITANSSTNEEPNKPKSLWTEHKSPDGRTYYYHIETKQSTWEKP
DEMKSPVEQMLSKCPWKEFKSDSGKPYFYNSQTKESRWAKPKELEDLEAMIKAEESGSVP
DPAASAAVAPVQATQAAEMVSTTTPVSIAAEPELVMSTPTTPAIDTEMMVNDIVEEQAYS
VSSSIQDKDHEVSSSGVVEELAKQDVLPDSASIEEPEEEKAPKKTYTWNTKEEAKQAFKE
LLKEKRVLSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEDARLKYKE
AKEAFQRFLENHEKMTSITRYKKAEQMFTELDVWNGISERDRLEIYEDVLFYLAKKEKEQ
AKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFE
EHIRALEKEEEEEKQKTLLRERRRQRKNRESFQVFLDELHEHGQLHSMSSWMELYPTVSS
DIRFANMLGQPGSTALDLFKFYVEGLKARYHDEKKIIKDILRDKGFVVELRTTFEDFVMV
ISSTKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIE
VDSAWEEVRERFIKEPAFEDITLESERKRIFKDFVHTLEHECQHHHSKNKKHSKKSKKHH
RKRSRSRSGSESEEEEENHTKKKRQRSDSRSASEHSTSGESEKSYKKAKKHKKKSKKRRH
KSNSPESEVEKEREKKDRDRDRERERDKENDKERSRQKESKQKSPKRKPVKDSGNWDTSG
SELSEGELEKRRRTLLEQLDDDQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacgacgactggagttaccggttcgcggctgccgttgcatcaggcgatggtaca
aatggaccaagtcagccgggactgtatccgaatggttctcgcatgatgagggcgcagttt
atgagccctgttgcccattacccctctgtgggaatgggtggcctacctccaaggccaggt
ttggccccaccaggcatgatcccacctttgctgggaccaatgggtgctcatccaatgggt
ccgatggcccctatgattccttctctcatgtctgggatgatgatgactactcatgtagcc
cccggcaccttacccaccttacccgcaggcatgccgccaggtttggaccccacattaggt
cagccgccagttgcaccgtcgccacttcctgtaatttcagcaccaccatcgatcactgct
aatagcagcactaatgaagaaccaaataaaccgaaatctttgtggactgagcataaatca
ccagatggtaggacgtattattatcatatcgaaaccaagcagtctacctgggagaagccg
gatgaaatgaaatctccagtggagcaaatgttatccaaatgtccttggaaggaattcaaa
tccgactctggaaagccctacttttacaattcccagacaaaggaatctcgttgggctaaa
ccaaaggagctggaggatcttgaagcaatgatcaaggcagaagaaagtggcagtgtaccg
gacccagcagcttctgcagctgttgcacccgtccaggccactcaagctgcagagatggtc
agcaccaccacacctgtgtcaatagctgcagaaccagagcttgtgatgtccacccccact
actcctgccatagacactgaaatgatggtcaatgatattgtagaggagcaagcctattct
gtatcatcttctattcaagacaaggatcacgaagttagcagcagcggcgtagtcgaagaa
ttggctaaacaagacgttttgccagactctgcttcaatagaagaacctgaagaggaaaaa
gctcccaaaaaaacctacacttggaacacaaaagaagaagccaagcaagcatttaaagaa
ctcctaaaagaaaagcgtgtgctgtccaatgcatcttgggaacaagccatgaaaatgatc
attaatgatcccagatacagtgccctggcaaagttgagtgagaaaaaacaagcttttaat
gcttacaaagttcagacagaaaaggaagaaaaagaggacgccaggctgaaatataaggag
gcaaaagaggctttccagaggttcttagaaaatcacgaaaagatgacctccatcacccga
tacaaaaaagcagaacagatgttcacagaattagatgtttggaatggaatttctgaacgt
gatcgcctcgagatttatgaagatgtcttattctatttagcaaagaaagaaaaggagcaa
gcgaagcagctgaggaagagaaactgggaggcgctgaagaatatacttgacaatatggcc
aatgtaacctactctactacatggtcagaagctcagcagtacctcatggacaacccgaca
tttgctgaagatgaagaacttcagaatatggataaagaagatgcattaatatgtttcgaa
gagcatattcgtgctttagaaaaggaggaagaggaggagaagcaaaagactttgctgcgg
gaaagaagacggcagcggaaaaacagagaatctttccaggtatttttggatgaattgcat
gaacacggtcagttgcattcaatgtcgtcttggatggagttgtatcctacagttagttct
gatatacggtttgccaacatgcttgggcagccagggtccacagccttggatcttttcaaa
ttttatgtggagggtctcaaagctcgatatcacgacgagaaaaaaataataaaagatata
ttgagggacaaaggatttgtggttgagcttcgaacaacatttgaagattttgtcatggtt
attagttcaacaaaaagggccacaacgttagatgctggaaatatcaagctggctttcaat
agcctcttggaaaaagcagaggctcgggaacgagagcgtgagaaagaagaggcccgcaaa
atgaagaggaaagaatctgctttcaagagcatgctaaaacaagcagcgccccctattgaa
gtagactctgcttgggaagaggtgcgggagaggtttattaaggagccggcttttgaagac
atcacactggaatctgagaggaagaggatatttaaagattttgtgcatactctagagcac
gaatgtcaacatcatcattcgaaaaacaagaagcattcaaagaagtccaaaaagcaccac
cgtaagagatcacggtcacgttcgggctcggaatcggaggaggaggaggaaaaccacaca
aaaaagaaaaggcaacgatcggactctcgatcagcctctgaacattccactagtggggag
tcagaaaaaagctataaaaaggcaaaaaagcacaaaaaaaagagcaaaaagagaagacat
aagtctaattctccagaatctgaagtagagaaagaaagagagaaaaaagatcgggatagg
gatcgggaacgagaacgagacaaggaaaatgacaaagagcgttcaagacaaaaagaatca
aaacagaaatccccgaaaaggaaaccagtgaaagactctggtaactgggacacatctgga
agtgaattaagtgaaggagagcttgaaaagcggagacgaaccctcttggaacaactggat
gatgatcaatag
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