Bufo gargarizans (Asiatic toad): 122944547
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Entry
122944547 CDS
T07965
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar00100
Steroid biosynthesis
bgar01100
Metabolic pathways
Module
bgar_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
122944547
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bgar01006
]
122944547
Enzymes [BR:
bgar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
122944547
Prenyltransferases [BR:
bgar01006
]
Terpene biosynthesis
Squalene/phytoene synthase
122944547
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
HAUS4
GAS
Motif
Other DBs
NCBI-GeneID:
122944547
NCBI-ProteinID:
XP_044158882
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Position
8:complement(170193405..170305213)
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AA seq
414 aa
AA seq
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MDFLRSLGHPEEIYHLVRFRLGGCRLVLSKQDRESMSDSLQTCYKYLNQTSRSFAAVIQA
LDGELRNAVCIFYLVIRALDTMEDDMTISLETKIPILHKFHTYLYQADWRFTESKDKHRV
VLEDFPTISLEFRNLAAVYQKVIVDICQKMGVVAAEFLEKQVESLLDWDKYCLSASGLPV
IGMSRLFSASGLEDAIIGENTRLSDSVGLFLQKTNIIRDYLEDQLEGREFWPREVWSKYS
KKLSDFAKPENVVPAVQCLNELVTNTLQYVPDVLLYLSRLRNQSVFHFSAIPQVMSLATL
ATFYNNPQVFKGVVKIRKGQTLTLMMNATNMKAVRFFMYQYTNEIYQKIPSTDPSSECTQ
NIVSTIKKLSLSNGPLASHHNFSPIYLSCVILLAILSWQYLRTVQASEEVHTGQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctgaggtctctaggacatccggaggagatctaccacctggtcaggttccgg
ctgggcggctgtcggctcgtgctgtccaagcaggaccgggagtccatgagcgacagcctg
cagacctgctacaagtacctgaaccagaccagcaggagcttcgccgccgtcatccaagcc
ctggacggagagctgcgaaatgctgtgtgtatcttctatctggtgattcgagctctggac
accatggaggacgacatgaccatcagtctggagaccaaaatccccattttgcataagttc
cacacgtacctgtaccaggcagactggaggtttacagagagcaaggataagcatcgtgta
gttctggaggacttccccacgatttccctagagttcagaaacctagcggcagtttaccag
aaggtgattgtagacatctgtcaaaagatgggagtggtcgcggcggagttcttggagaag
caggtggaatctctcctggattgggataagtactgtctctctgcgtccggattaccggtg
atcggtatgtcccgcctgttttctgcctcaggactagaagacgctatcatcggcgagaat
acaagactctctgactctgtggggctcttcctgcagaaaacaaacatcatccgagattac
ctggaagaccagctggaaggaagagagttctggcccagagaggtgtggagcaaatacagc
aaaaaactgtcagactttgccaagccggagaacgtagtgccggctgtgcagtgcttgaat
gaactggtgaccaatactctgcagtatgtgcccgatgtccttctctacctgtcccggctg
aggaaccagagtgtgtttcactttagtgccatcccacaggtcatgtctttggccaccctg
gccaccttttataacaacccgcaggtgtttaagggagtggtgaagatccgcaaggggcag
acactgacgttaatgatgaatgccaccaatatgaaggcggtcagattctttatgtaccag
tatactaatgagatctaccagaagatcccctcgacagacccctcttccgaatgcacacag
aacattgtctccaccatcaagaaattgagtctatccaatggccctctggcatcccaccac
aacttctctcctatttacctgtcatgtgtgatacttttagccatcctcagctggcagtac
ctgaggacggtccaggcctcggaggaggtgcacacaggccagtga
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