Bufo gargarizans (Asiatic toad): 122944737
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Entry
122944737 CDS
T07965
Name
(RefSeq) partner and localizer of BRCA2-like isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03440
Homologous recombination
bgar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122944737
03460 Fanconi anemia pathway
122944737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122944737
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
122944737
FA (Fanconi anemia) pathway
Downstream FA components
122944737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
TSNAXIP1_N
ZYG-11_interact
Motif
Other DBs
NCBI-GeneID:
122944737
NCBI-ProteinID:
XP_044159251
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Position
8:complement(179045826..179086167)
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AA seq
1246 aa
AA seq
DB search
MEEVTAAAAACQDMENAPEKPLTLEEKTKLKERLALLKKEYKKTVHRLQRSQRAQRVKTH
VKKTIEEQNRLLSQELSIQDSVFILAGSLVDASNASRKATESTQSIVTPSAERKPSVSFN
LDPEILHCDKKSPSWSGSESSCQELSVASKTETTGLSNPNQGKRSRLKLNRRQAFSEAIS
PRVQVNSSASNLEEKRNINEVETTRDSALCLTADDTPQINEATFNSESTRCVQVTPECEN
DLGVNVLVQQHNNMGATSSPASPVFTKCLKEDIKLSSEHIAYLYPGEKVTLDTGQPKVAT
EHSQDRSRNNRMHRGKEPAHSHTNIQQRLTSEQISSVTKLLGDTSQDLTLDATCNFPPIP
YIMETSSTSPPCSENHSVPTAKYHGEPSGFKEECSPLDSCTLVEGLLFPVEYYVRTTRRM
TSCQRKVDLEAVINSHLGMARKGAKSGPRRASTSLTPSLQVSGASLSIPSHSAARSRRVR
GRKSCPASVSSGLDNISKKLTFGSSTSPIADGFQGVKETIEAKELCIETCAEGLKKLEDV
TLPSEGRRRTPDDGNLGLHALPNNTNILQRCVYNLRTSAKTSEPSSPFFLFSSGLNLKHL
MGHVDITDFHLPDEDFGVLKLEKLKSASQLDPRSTNEKERYRGAYSIDGSTRPVGDYSAL
LHGAVGGCTDASQRNSKLTLEGCPNDNQSQRDGTTSYIFLTRATPEVFHLSPSKEKTCAP
GCPVSCPLQQAPLGSYSNVDVSKHFSDPELGTPAPNANCVETSSTNMESAIAGPSEPPPS
VLSPTKEVACSVLLSTSMCSVPVDTHGECRLSGCTPGFPMLGPTPAVFSSPQCSTIPAPC
EDRTPTRTVEFPPEEDLVTQDDVETDPYSELLIPPSGDHVCIEKKACSHPGHETNESDQH
NMEGMLEGDHIHLVSEIKDTCGGGCPVDLCSVWWEFSGCVDLCIVSANEFSVCLWRPQEV
FIWKCVHTWSFSEMPVIQILPLFQEKNMVCIALGNLDIMEIWVLSSHPELQTWEKQLVKR
GHTKTAQGLSRHRVVSSSGGGGSQAVELWQLSESGSVAGSHALVAPNDSIVAFSEVDGER
DALVGSTVDNNLVLWNSVTGHLLSTFYIGNLCSDLTCISAASDSGLLFLVVGSLFSKSCE
VTGSCIFKLIATNPQGGASAFIMAYKLPEGLSSRYLEGDVKNQRAAAVLTCGSIALWDLS
RSHCSAVLPPDPDTPWCLVRWGNRPSCLLAGRKDGTICIFEYSDRS
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacagcagcggccgccgcgtgtcaggacatggagaacgcgccggagaaa
cctctcactttagaagaaaagacaaagctgaaggaaaggctcgccttactgaagaaagaa
tacaagaagaccgtccaccgcttacagagatcccagagagcccagagggtgaaaacacac
gtcaagaaaaccatagaagagcagaaccggttattaagccaggaactgtccatacaagac
agcgtcttcatattagcaggttctctggttgacgccagtaatgcttctagaaaagccacc
gagtcaacgcaaagcatcgtcaccccatcagcagaaaggaagccgtccgtaagctttaat
ttggatccagaaatcctccactgtgacaagaagtcaccttcatggtctggaagcgaaagt
agctgtcaggagctcagtgtagcaagcaagactgagactaccggattgtctaatccaaac
caaggcaaaaggagccggctgaaactaaatagaaggcaagccttctcagaggccatatcc
ccgagagttcaggtcaatagtagtgcgagtaatctagaagaaaagcgtaatattaatgag
gtggaaactacaagggactcagcgctgtgccttacagcagatgatacaccgcagataaat
gaggccactttcaattcggagagtacaagatgtgtgcaagtgactcctgagtgtgagaat
gaccttggtgtgaatgttcttgtacagcagcataataatatgggggccacaagttctccg
gcgtcacctgtgtttacaaagtgccttaaggaggatataaagctttcctcggagcatata
gcttatttataccctggggagaaggttacactagatactgggcaacctaaagtagccaca
gaacattctcaggatcgtagcagaaataacaggatgcatagaggtaaggaaccagcacat
agtcacactaatatacagcagaggctgacgagtgaacagatatcctccgtaacaaagctt
cttggggacacctctcaggatctgacattggatgccacctgcaattttccaccaatccct
tatattatggagacatcatctacttctcccccctgctctgagaaccattcagtgccaacg
gccaagtaccatggagagccatctgggtttaaggaagagtgcagcccactcgactcttgc
acgttggtggaaggacttttattcccagttgaatattatgttaggacaactcgccggatg
accagctgccaaagaaaagtggaccttgaggcagtaatcaacagccacctgggcatggcc
agaaagggggcaaaaagtggacctcgtcgggcaagcacctccttaactccttccctgcag
gtcagtggcgcttctttaagcatccctagccacagcgctgcaagatccagacgagttaga
ggtaggaaatcatgtcctgcttcagtgtcttctggcctcgacaacatatcaaagaagcta
acatttggttctagcaccagcccaatagcagatggttttcaaggagtaaaagaaaccatt
gaggcgaaagaactgtgcatcgagacttgtgcagaaggtttgaagaaattggaggatgtc
accctgccatctgagggaaggagaagaacaccggatgatggcaaccttgggttacatgcc
ttacctaacaacacaaacatattacagagatgtgtatataacctcaggacctcagcgaag
accagtgagccaagctcgcccttttttctgttcagcagcggactaaatctgaaacatctc
atgggccatgtagacatcaccgacttccatttgcccgatgaagacttcggagtcctcaaa
ctggaaaagctgaaatctgcaagccaactggatccgaggtcgaccaacgaaaaggagagg
tacaggggggcctatagcattgacggctcaacaaggccagtcggtgactattcggcactg
ctacatggagcagtggggggctgcactgatgcgtctcagagaaactcaaaactgacactc
gagggctgcccgaatgacaaccaatctcaacgagatgggacgacatcttatattttcctt
actagggcgacaccggaggtatttcatctctcgccctcaaaagagaagacttgtgcccct
ggttgtccagtcagctgtccccttcagcaagcccccctaggttcttattctaatgtggac
gtatccaagcatttctcagaccccgagctcggcactcctgcgcctaatgcaaattgtgtg
gaaacatcaagcacaaatatggagtctgccatagcaggaccctctgagccaccacccagc
gtcctgtctcctacaaaagaagtggcttgtagtgtcctcctgtcaacctcaatgtgttct
gtccctgtagatactcatggggagtgtaggctctcggggtgcacacccggcttccctatg
ttagggccaacgcccgccgtcttctcatccccgcagtgcagcactattcctgcaccttgt
gaggatcgcacgcccacaagaacagtagaattccctccagaggaggatttggtcacacaa
gatgatgtagagactgatccgtacagtgaattattaatacctccatcaggggatcacgtg
tgtatagagaagaaagcttgtagtcacccaggacatgagaccaatgaatctgatcaacat
aacatggaagggatgttggaaggtgatcatatccaccttgtctctgaaattaaggatacc
tgcggtggtggatgtcctgtagatctgtgctctgtttggtgggaattctctggctgtgta
gatctctgtattgtatcagccaatgagttctctgtctgtctttggagaccacaagaagtt
ttcatatggaaatgcgtccacacctggagtttctcagagatgccggttatccagattctt
ccgttgtttcaagagaagaacatggtgtgcatcgctttgggaaatctagacattatggag
atctgggtgctgtcttcacatccagagcttcagacctgggaaaagcagttggtcaagcgt
gggcacacaaagactgcccagggtctgtcccggcaccgtgtggtcagcagcagcggagga
ggaggcagtcaggcggtggagctctggcagctatcagaaagcggaagtgtggctggttct
cacgctctggtggcccctaacgacagcatcgtggctttctcggaagtggatggcgagagg
gacgctctggttggatctaccgtggacaacaatctagttctctggaattcagtgaccgga
catctcttgagtacgttttacatcgggaatctttgctctgacctcacatgtataagtgca
gcatcggactcgggtttgttgtttttagtcgttggcagcctgttcagcaaatcctgtgag
gtcactggtagctgtatattcaagctgatcgccaccaacccccaggggggagcgagtgct
tttattatggcctacaagctaccagagggactcagtagcagatacctggaaggtgatgtg
aagaatcaaagagcggctgccgtattgacttgtggaagcattgccctctgggatttatcc
agaagccattgctctgctgtgctccctccagaccccgatacaccctggtgtctggtacga
tggggtaacaggccgtcttgtttacttgccggacgtaaggacgggaccatctgcattttt
gaatattcagaccggagttga
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