Bufo gargarizans (Asiatic toad): 122944829
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Entry
122944829 CDS
T07965
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03430
Mismatch repair
bgar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122944829
03460 Fanconi anemia pathway
122944829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122944829
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122944829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122944829
NCBI-ProteinID:
XP_044159435
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Position
8:complement(135422749..135469934)
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AA seq
850 aa
AA seq
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MEQACTEPAKAIKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEYGA
ELIEVSDNGCGVEEHNFEGLTLKHHTSKLQDFSDLVTVETFGFRGEALSSLCALSDLSIF
TCHKSAKVGTRLVLDQNGKIVQRSPLPRQQGTTVGIQQLFYTLPVRHKEFLRNIKKEFAK
MVQILQAYCIISTDVRINCTNQVGQGKRTPVVCSSGTSSSVKENIGAVFGQKQLQNLIPF
EQLPPSESVCEEYGLNHADVLGGFYSISGYISRCDHGVGRSSTDRQFYFINQRPCDPAKV
IKIVNEVYHSFNRHQYPFVVLNVCVHSECVDINVTPDKRQILLQEEKLLLAILKTSLIAM
FSSSVNKLNVNQQLMDVSGNLRRVNAEESDCPKVGQSNLSERGAFAVSKLREAFSISQRS
MGSPASTRTGTMQTQSTSPAQRKLQSFFNLSPKVETRISIPASEESDVKEPQGTTQTFSD
VTQSESDCDSGKGATSTSDSELGLGKGATSTSDSELGLGAPDVPCRTNSDSLTNSPDTLV
KREAESPSTSDPRHVEAEILCQHPNRDEEDDVSAPNCKRLKMEILVKNVEPDSVDAPVNI
RKKTVPLHFSMHRLIKQMEKLKRQRQQKEELEMFRRFRAKISPGENQTAEAELRKEISKE
MFSKMDIIGQFNLGFIIAKLDADLFIIDQHATDEEYNFEMLQQNTVLQGQRLIMPQKLNL
TSVNESVLMDNIEIFKKNGFDFIFDEDAPVMERVKLVSLPTSKNWTFGQQDIEELIFMLS
DSPGVMCRPSRVRQMFASRACRKSVMIGTALNSHEMRKLVAHMGEIEQPWNCPHGRPTMR
HLASLDMIDF
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagcttgcactgaacccgccaaagcaattaagccgatcgatcgcaagtccgtc
catcaaatctgctccggccaagttgtactgagtcttgccaccgccgttaaagagcttctg
gagaacagcatagatgctggagcgacaagtattgacataaagctgaaggagtatggagca
gaactcattgaagtctcagacaatggctgcggggtggaagaacataactttgaaggctta
accttgaaacatcacacgtccaaactgcaggatttctctgacctggtgaccgtggagact
tttggttttcgaggagaagctttaagttcattgtgtgctttaagtgatctgtccattttc
acctgtcataaatcagctaaagtgggcactcgcttggttttggatcaaaatggaaaaatc
gttcaaagatctcccctcccccgacagcaaggaacaacagtcggcattcagcagctcttc
tacaccttgccggtacggcacaaggaattcctgaggaacattaaaaaggaatttgcaaaa
atggttcagattctacaagcttattgtatcatttcgacggacgtgcgtataaattgcacc
aaccaagtgggccaagggaagagaacccccgtcgtctgctcaagtggcacttcaagtagc
gtgaaagaaaacataggagctgtgtttggccagaaacagttgcagaacttgattcctttt
gagcagctgcctccaagtgaaagtgtgtgtgaggagtatgggctgaaccatgcagatgtc
ctaggtggtttctatagtatttcaggatacatatctcgatgtgaccatggtgtaggacga
agttccacggacaggcagttctattttatcaaccagcggccttgtgaccctgctaaggtc
attaagattgtgaatgaagtgtatcattcattcaacagacatcagtatccattcgttgtc
ctcaatgtctgtgtccattcagaatgtgtagatatcaacgtcacgccggacaagaggcag
attttactccaggaagagaaacttttactggctattctaaagacttctctcatcgccatg
ttcagcagcagtgtgaataaactaaatgtgaaccagcagctgatggatgtctcaggcaat
ttgagaagagtaaatgcagaagaatctgattgtcccaaagtaggacagtctaatttatcc
gagagaggagcattcgctgtctctaaactgagggaggccttctcgatcagccagagatcc
atgggcagtccagctagcacgaggactgggacgatgcagacgcagagcacctctcctgca
caaagaaaactgcagtcattttttaacctttcaccaaaagttgagaccaggatctctata
ccagcatctgaggagagtgatgtcaaggagcctcaaggaaccacgcaaacatttagtgac
gttactcagagtgaaagtgactgcgactcgggcaaaggtgccaccagcacttctgacagt
gagttaggtctcggcaaaggtgccaccagcacttctgacagtgagttaggtctcggcgcc
cctgacgtgccctgccgcactaacagtgacagcttgacgaactcgccggatacccttgtg
aaaagagaggcggaatctccatccacaagtgatccccgtcatgtggaagccgagatccta
tgccagcatcccaacagagacgaagaagacgatgtttctgctccaaattgcaagcgtttg
aaaatggagatattggttaaaaatgttgaacctgattcggtggatgcaccagttaacatt
aggaagaagactgtgcctttacatttctcaatgcaccgtctgatcaaacagatggaaaaa
ttaaaaaggcaaaggcagcaaaaggaggaattggaaatgttccggagattcagagccaag
atcagccctggggaaaatcagaccgcagaagccgagctcaggaaagagatcagcaaagaa
atgttttccaagatggacatcattgggcagtttaatctgggattcataatcgccaaactg
gacgccgacctcttcatcatcgaccaacacgcaactgatgaggagtataactttgaaatg
ttacagcagaacactgtcctgcaagggcagagacttatcatgccacagaaactaaattta
acgtctgtgaatgaatcggttctgatggacaatatagaaatattcaagaaaaatggtttt
gatttcatctttgatgaagacgcgcccgtcatggaaagagtgaagttagtttctttacca
actagcaaaaactggacctttggccagcaggacatcgaggaattaatctttatgcttagt
gactctcccggagttatgtgcagaccgtctcgagtaaggcagatgtttgcctcaagagca
tgcagaaaatctgtgatgattggaacagccttaaacagtcatgaaatgaggaaactggtg
gcacacatgggggaaatcgagcagccgtggaactgtccccatgggaggccgaccatgagg
cacctcgccagcctggatatgattgacttctga
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