Bufo gargarizans (Asiatic toad): 122944884
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Entry
122944884 CDS
T07965
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122944884 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122944884 (NUP54)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122944884 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
122944884
NCBI-ProteinID:
XP_044159533
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All DBs
Position
1:complement(275848289..275919197)
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AA seq
536 aa
AA seq
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MAFNFGSATGATANQGTTGFSLGNFTPKTTASGFVFGNTATTAASTGFGGGFGGFGATTT
TAPSNTGFSFSAPTNTGTTGLFGNTQNKAFGFGSAFGATGTNTGLNTGLSTGLGFGGFGT
QPQQQPSALGGLFNQPVQNPNQSNQLINTASALSAPTLLGDERDATLAKWNQLQAFWGTG
KGYFSNNIPPVEFTQENPFCRFKAVGFSCIPNNKDEDGLVELVFNKKEADIRSQQQQLVE
SLHKILGGHQTLTVNVEGVKALPDDQTEVIIYVVERSPNGTSRRVPATALNGHFEQANVK
SNLQQLGVTLTIARTELSPAQIKQLLHNPPAGVDPVIWDQAKIDNPDPDRLIPVAMVSFK
ELLRRLKVQDQMTKQHQSRLDIISEDISELQKNQATTMAKIAQYKRKLMELSHRVLQVLI
KQEIQRKSGFAIQAEEEQLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEE
KYYVDGDLLREIKQHLKQQQEGLSHLIGIIKDDLEDIKLIEQGLSDNVHIRGGMLS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaacttcggaagtgcgacgggggccacagccaaccagggtacaacaggtttc
tccctgggaaattttactccaaaaacaactgcatcgggttttgtgtttggcaacactgct
accacagcagcatccacagggtttggcggtggatttggtggttttggagccacaacaacc
acagcaccttcaaacactggttttagtttctctgcaccaaccaacactggcacgactggt
ctcttcggtaacacgcaaaacaaagcttttggattcggaagtgcttttggtgcaacagga
acaaacactggtctcaatactgggttgtcaactggtctgggcttcgggggttttggcact
caacctcaacagcagccgagtgcccttggcggtctattcaaccagcccgtgcaaaatcct
aaccaatcaaatcagctaatcaacacagcaagcgcattatctgcgccaacattgcttggg
gatgagagagatgccaccctagccaaatggaaccaacttcaggctttttggggaactgga
aaaggatacttcagtaataatattcctccagtggagttcacacaggaaaatcctttttgt
aggtttaaggccgtcggtttcagttgcatacctaacaacaaagatgaagatggtctcgtt
gaacttgtgttcaataaaaaggaagcagacatccgttctcagcagcaacagttggtagaa
tccctgcacaaaatcttgggagggcaccagacccttactgtaaatgtggagggggtgaaa
gcattacctgatgaccaaactgaagtgatcatctatgtagtggagcgctcgccaaatggc
acctccagaagagttccggctacagctttaaacggccactttgagcaggccaatgtcaag
tccaacttgcagcagcttggagtcactttaaccattgctagaacagagctatcccctgca
cagattaaacagcttcttcacaatccaccagctggtgtggatccagtcatttgggatcaa
gcaaaaattgataatcctgatccagatagactgattcctgttgctatggtcagcttcaag
gaacttctcagaagactaaaagtacaagatcagatgacaaagcagcaccagtccaggctg
gatattatatctgaagacataagtgagttacagaaaaatcaggcaaccacaatggcaaaa
attgcacagtacaaacggaaactaatggaactttcccacagagtcctccaggttttaata
aagcaagaaattcagcggaagagtgggtttgccatccaagcagaggaggaacagcttcgt
gtgcagctagacactatccagtctgaactcaatgcacccactcagttcaagggtagactc
aatgagctaatgtcacagatcagaatgcagaatcactttggggcagtgcgatcagaagaa
aaatactatgtagatggagatctgttgagggaaattaagcagcacttaaagcaacagcaa
gaaggactgagccatttaatcggcataataaaggacgacttggaagacatcaagctgatt
gagcaaggactgagtgataatgtccatatccgcggaggaatgttaagttga
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