Bufo gargarizans (Asiatic toad): 122945011
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Entry
122945011 CDS
T07965
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122945011
Enzymes [BR:
bgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122945011
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
U-box type E3
122945011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-CCHC
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122945011
NCBI-ProteinID:
XP_044159734
LinkDB
All DBs
Position
8:178771358..178812267
Genome browser
AA seq
1814 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLADLKKQIMGRERLKAADCDLQITNAQTQEEYTDE
TALIPKNSSVIVRRIPIGGVKTTTKTYVISRAEPVSGPSKSIDDASASISLAQLSKTANL
AEANASEEDKIRAMMSQSGHEYDPSNYMKKPLGPPPPTYTCFRCLKPGHYIKNCPTNGDK
SFESAPRIKKSTGIPRSFMVEVEDPNMKGAMLTNTGKYAIPTIDAVAYAMGKKEKPPFLP
EAQSSSSEEEDPVPDELLCMICKDMMSDAVVIPCCGNSYCDECIRTSLLESEDHMCPTCH
QSDVSPDNLIANKFLRQAVNNFKNETGYTKSIRKQQSASQQRQQQQAAQPQRSTPQPTRP
VQSRQQDPLIAPTTVAPTPTTAPQSTAPTTSTAHSPAQTSAQPQPAAPSTEPALPVPVQK
EREKPEPSFHHEKREGSRSSSTPSAPVTSASSLPLPNSLHLGDKGFHVPVLGQMPPSTHH
LPPPTPLMRANIPRPSGPRPHIGWDGHSRGRHPHNDRPPRNQVPSLTSSGPVYVPPPTPL
FPPPPPHGLQLPPGVPPPQFPPQFPPGQPPAAGYNVPPPGFPSAPATVSAPWANTAVQGA
HANAIPAPSLAPPLSKEEFYREQRRLKEEEKKKSKLEEFANDFAKELLEYKKIQKERKRS
YSRSKSPYSGSSYSKSSYSYSKSRSGSSRSRSYSRSFSRSRSRSFSRSPSYQRKAHGKGR
TYRSRSRSHGYPRSRSRSPYRRFHSRSRSPPYRPPSPANKRLLQQVEGERDYANRYRELP
PYDLKAMYGRQPDLRDPYEKEAYREWERTYREWFEKYYKGCALNAIPRQRSPIGRENFPE
NRFLLPPQTRRDHSPYRGHRENYPAPLLPRLRPPLVGGYQEKLLPRDAHMKDTRKSKERE
PFVQSGDSRANKHKKHRKRRKEESEGLPKTGTDGSRKHRDPHGDDGKRNEHMFVPTSKDD
ATPVRDEPMDAESIALKPLSDKDKREKPRVKVDKTKRRAEVNQPKKETLSKVIRIEKAGD
GEKAKPKAGDGEKAKPASDEPPPKKIKDELQKNDNSKHVSSQKDDKTMLPRKVHLKVIKE
NQEKQSKEEKSKKDHTKDTKMDKPTIKEEKAKKAAEKPRTAESKPEKRKRKVDDKSAEKE
QEKPAKTIKVETPEAPKPPASKLKSEAEVVKPEKIPEKDKATTVKKIKLNRETGKKITNT
ETAAGTEEAQDKNEPTAPAKPKAERVKGKVRKKVLAPDGSGSTLVDYTSTSSTGGSPLRK
AEEKQDNKRTVIKTLEEYTNDSMEPAEDVIIMIQVPPSKWDKDEFESEDDDAKDSQGTSN
PGKPMSVVSKPASTVILPEKEVKQGSDGTPQDARSTKETNVSQTKNRSKDKNSPAIDKDS
SDKRKGSSQNDSSSDRNQQSSKEKSSEKQESGRGSSNKDVTPTSEKKSDRGDSRDRKQEH
ENKERDKKEHDRDRKTEHESRERDKKNDHDKRQDHDSRDRKPEHDSKDRERRQEHDGKER
DRKQEHESRERERRSEHDDKVKRPDSDKKSDHDSRDQSGSRRKDERRKESPLRNKDSSSN
SQKVKPRDDSREPKKVPRDSKSGSHSPGQERRPRAEQKSSDSKRQSNTDQVSSDRSSERG
KEKAPSKSKTSEDTSDKRSSHPKRPSPEVKTDKEASDKTKGPQSRSTRLSTDLTKDTDEA
SFVPDYNESDSEASVKQDDPQETKNKDDEHTQATDMGSSNLPATGPNSPAGSQSPGDSGS
SSVSSTGSPDKKKRKKEKKKHKKHKKHKKHKKHTGNESETEKGPKHKHKKKKSKKSKDKE
TEKEDTKAKPPATS
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgtgcactataagttctcctccaaactcaactatgacaccgtgacctttgat
gggctgcacatctccctggccgacctcaagaagcagatcatgggccgggagaggctgaag
gcggccgactgcgacctgcagatcaccaacgcacagacccaggaagagtacacggacgag
acggcgcttattcctaagaattcatctgtcatagttcggagaatccctattggaggagtg
aaaactacaacaaagacatatgtcataagtcgcgctgagccagtgagtggaccgtcgaaa
tcaattgatgacgcttctgcatctatatctctggcccagctttctaagaccgccaatctg
gctgaagccaatgcttctgaagaggataaaatcagagcaatgatgtctcagtctggccat
gaatatgaccctagcaactacatgaagaagcctctgggaccgccgcctccaacgtacact
tgctttcgatgtttaaagcccggtcattacatcaagaactgtccgacaaatggggacaaa
agttttgagtctgctcccaggataaagaagagcactgggattcctcgcagctttatggtg
gaggtggaagatcccaatatgaagggggctatgcttacaaacactggaaaatatgccata
ccaaccattgatgctgtggcatatgctatgggcaagaaagaaaagcctccatttctacct
gaggctcagtcgtcctcttctgaggaggaagaccccgtccctgacgagctgctgtgcatg
atttgtaaagatatgatgagcgatgcagttgttattccttgctgtggaaacagctactgt
gatgaatgtatccgcacttcactactggaatcggaggatcacatgtgccctacatgtcat
cagtcggacgtctctcctgataacttaatcgccaataaattcctacgtcaggctgtgaat
aactttaagaatgaaaccggttatacaaagagtattcgtaagcaacagtctgcctcccag
cagcgccagcaacagcaggcggcacaaccacagcgtagcaccccgcagccaacacgtcca
gtgcagtctcgccagcaagatcctcttatagctcccactactgtagctcctactccaact
actgctcctcaaagcactgctcctaccacatctactgcacacagccctgcacaaaccagt
gcacagccccagcctgcggcgccctctacagagcctgccttgcctgtacctgtccaaaag
gagcgagagaaaccagagccttcttttcatcatgaaaagcgcgaaggatctcgatcctct
tccacaccttctgctccggtcacatcggcgagcagcttgccattgcccaacagcctccac
ttaggagacaaaggcttccacgttccagtgcttggacaaatgccaccttctactcaccac
cttcctcctccaactccactgatgagagccaatataccaagaccttctggaccaagaccg
catataggatgggatggtcatagccgtggccgtcaccctcacaatgatcgcccaccaaga
aaccaagtgccgtctttgacatcgtcgggtcctgtatatgttccacctccgacacctctg
ttccctccgccgccaccccatggtcttcagttacctcctggcgtaccaccacctcagttt
ccaccacagttcccacctggacaacctcctgctgctggctacaacgtaccacccccaggc
ttcccctcagcacctgctacagtgtctgccccatgggccaatacagcagttcagggagca
catgccaatgccattcctgcaccgtccctggcaccacccctctctaaagaagagttctat
agagaacagagacgactaaaggaggaagagaagaagaaatcgaaacttgaagaatttgct
aatgattttgcgaaagagctgcttgaatacaagaaaattcaaaaagagcggaagcgttct
tattccaggtctaaatctccttactctggatcatcatactctaaaagttcgtactcttac
tctaaatcaagatctggttcttcaaggtcacgctcatattctcggtcttttagtcgatcg
cgttctcggtctttttcaagatctccttcataccagaggaaagcccatggaaaggggcgt
acttaccgctccaggtcccggtctcatggatatcctcggtccaggtcaagatcaccatac
aggagattccattctcgatctagatccccaccctacagaccaccttctcctgctaataag
agacttcttcagcaagttgaaggggaacgtgattatgcaaaccgctatcgtgaattgcca
ccctatgatctcaaagcgatgtatggccgtcagccggatctgagagatccttatgaaaag
gaggcctacagagagtgggaacgtacttacagggaatggtttgaaaagtattataaagga
tgtgcattgaatgccattccaagacagaggtcgccaatcggtagggaaaattttccagaa
aacagatttcttcttccaccacagactcgaagagatcattcgccttatcgtggtcataga
gaaaattatcctgcacctttactaccccggctgcgcccacctttagttggtggatatcag
gaaaaactactgccacgtgatgcacacatgaaggacactagaaaatcaaaggaaagagaa
ccttttgtccaatctggcgactcgagggcaaacaaacataagaaacatcgcaagagacgg
aaagaagaaagcgaaggtttgcctaagactggaactgatggatcgagaaagcacagagac
ccgcatggggatgatggcaaaagaaacgaacatatgtttgtgcccaccagcaaagatgat
gccaccccagttagagatgagcccatggatgccgagtctattgcgctgaaacctctttct
gataaagacaaacgagaaaaaccaagagtgaaagtcgataaaactaaacgtagagctgag
gttaaccagcccaagaaagaaactttatccaaggtaatcaggattgaaaaagcaggggac
ggagagaaagctaaaccaaaagcaggggacggagagaaagctaaaccggcgagtgatgag
ccaccaccgaagaagatcaaagatgaactgcagaagaacgacaattcaaaacatgtgtct
agccaaaaagacgataagactatgttgcctcgtaaagtccatctcaaggtaataaaagaa
aatcaggaaaaacagtctaaagaggagaagagcaaaaaggaccacacaaaagacactaag
atggacaagccaacaattaaggaagaaaaggctaaaaaggcagcagagaaaccaagaaca
gctgagtccaaacctgaaaaacgcaagagaaaagttgatgacaaatctgcagaaaaggaa
caggaaaaaccagctaagactataaaagttgagactcctgaggctccaaaacctcctgct
tctaaactaaaatctgaggcagaggttgtcaaacccgagaagattcccgagaaggacaaa
gcaacaactgtgaaaaagattaaactgaaccgtgagactgggaaaaaaataacaaacacg
gaaactgctgctggaacagaagaagcacaagacaaaaacgagccaacagccccggccaaa
ccgaaggcagaacgtgttaagggaaaagtacgaaagaaggtacttgctcctgatggatct
ggatccaccttggtcgactataccagcacaagctccacaggtgggagtcctctccggaaa
gcagaagaaaagcaagacaacaaaagaacggttattaagaccttagaggagtataccaat
gatagtatggaaccagcagaagatgtcatcataatgattcaagttccaccgtcaaaatgg
gacaaggatgaatttgagtctgaagatgacgatgctaaggactcgcaaggaacatcgaat
cctgggaaaccaatgagtgttgtatccaaaccagcatctactgtaattttaccagagaaa
gaagtgaagcagggaagtgatggaacgccacaagatgccagatcaaccaaggaaaccaat
gtttcccaaaccaagaacagatcaaaagataaaaatagtcctgcaattgacaaggactct
tccgataaaagaaaaggaagttcccaaaatgacagcagttctgaccgcaaccaacagtcc
tcaaaagagaagtcatctgaaaaacaggaatcaggacgtggcagttccaacaaagacgtt
actcccactagcgagaagaagtctgatcgtggagacagcagagatagaaaacaagaacat
gagaacaaagagagggataagaaggaacatgaccgagaccgaaagaccgaacatgagagc
agagagagagacaaaaagaatgatcatgacaagaggcaagaccacgattcacgtgacaga
aagcctgaacacgacagtaaagatcgggaaaggaggcaagaacatgacggcaaagaacgg
gatagaaaacaagaacatgaaagccgagagcgagagagaaggtctgagcacgatgacaag
gtaaagaggccagacagtgataaaaagtcagatcatgacagtcgggatcagagtggttcc
aggagaaaagatgagcgacgaaaggaatctcctctcaggaacaaagattcatcgtccaac
tcccaaaaagtaaaacccagagacgactctagagaacctaagaaagttccgagagactct
aagagtggcagtcacagtcctggtcaagagcgcaggccaagggctgaacaaaagtcgtca
gactcaaagcgacaaagcaatactgatcaagtgtcatctgacagaagcagtgaaagaggg
aaagagaaagccccatctaaatcaaaaacttcagaagacacgagtgataaaagatcatcg
caccctaaacgtccctcaccagaagtaaaaacggacaaggaagcctctgacaagacaaag
ggtcctcaaagccgttctacacggctctccacagacttgaccaaagacactgatgaagct
tcatttgtgcctgattacaatgaaagtgatagtgaggcctctgtcaaacaagacgaccct
caggaaactaaaaacaaggacgatgaacacacacaagctacagatatgggtagtagtaac
ttgcctgccactggcccaaacagtccagccggcagccaaagccctggcgactccggcagc
agcagcgtcagctccacaggcagcccagacaaaaagaaaaggaagaaggagaaaaagaaa
cacaagaagcataaaaaacacaagaagcataagaagcacacaggtaacgagtcagagact
gagaagggcccgaaacacaaacacaaaaaaaagaaatccaagaaaagtaaagacaaagag
actgaaaaggaggacactaaagccaaacctcctgcgacctcgtag
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integrated database retrieval system
