Bufo gargarizans (Asiatic toad): 122945105
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Entry
122945105 CDS
T07965
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122945105 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122945105 (NUP98)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122945105 (NUP98)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122945105 (NUP98)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122945105 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
122945105
NCBI-ProteinID:
XP_044159912
LinkDB
All DBs
Position
1:complement(278593645..278627443)
Genome browser
AA seq
1765 aa
AA seq
DB search
MFNKSFATPFGGGTGAFGATSTFGQTAPGFGTSTATGFGPSTFGTINNTGGLFGSTQNKP
GGLFGTGTFNQTATPSTNTGFGFGTSTGTTNSLFGATNTGSGLFSSQSNAFGQTKPSTFS
SFGTGTNSTSLFGSTQTTANPFGGTSSTLFGTSTFSAAPSGTTIKFNAPSGTDTMAKGGV
TTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNPVGAATGTSLFGAATATSSAP
TGLFGATPSSSNFSFGNKNAFGQTTSTFGANTGGLFGQPAAQPATSLFNKPFGQATTTQN
TGFSFGNTNTLGQASTMGLFGSTQPTQSTGLFGTSTSTNAGSAFGAGAGLFGQTNTTPFG
GVGSSTLFNTKPAGFGTTTTSAPAFGTGTGGLFGFGANNTGSSLFGNKTAPGTLGAGLGT
AFGQGLNTGQTSLFGSNQPKLGGTLGTGAFGSTGFNAANTGLGFGGPQAPMALADPNAAA
QQLVLQQQLTALAYSPYGDSPLFRNPISDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATKVRPKALQTAGTAKTQLFDGLDDDEPSLSSGAFMPRKSIKKLVLKNLNISNLASPSRS
EQDEASSPARYPENDDGVNERNGPEVDGHEVSEFYPPPPSKLLPQSLEKKRMNSGMDDTI
VALNMRNALRNSLDGSAEESSLTEEDILHDVPPHPAGIVLTREGYYTIPSMEELAKMIDE
DGKCIVEGFTIGRRGYGSIYFEGLVDLTNLNLDEIVHVRNKEVIVYTDDGNKPPVGEGLN
RAAEVTLNEVWPIDKTTRSLIKSPERLEEMNYKSKLEAASRKQGAQFKEYRPETGSWVFK
VKHFSKYGLQDSDEEEEDATSTAETKKMKAAALPPPGQQPPQQQAVLNGRPTPPPQSLAE
EELGRALELDSDMADITQEPLLDSAADDQDITEEQEPVSASSHIASSLGVNPHALQVMKA
SLLLEDEGGDLVSPFACFRPSTPQEVRSPLRFVPAAQSPRASSGRLQSRFSGPSVLKQKD
SPLLSQSPKPPSSAPWPALGPLSSAFMMPSPVPETQLRTVGTRRQQGLVPLDKSVSDGKG
KLLIDMSLFVGRSFSVGWGQNWTLAHSGDMLSGAREREEAAGNMETMDYGFLPKPVSAKS
LTETPFKVHLEKLSLEEKRTDLQSYLIPLEIALKNSTVQSERCPRLVPNPGNSAIHDYAG
WVGEFCAEPAHVEPVVKQWCLTWTLCKALWGRLRELETGLDDLNEYVERLHRRKAFSHWL
AETAAERIEEEAALHLHERPVEAVFSFLTGCRISEACRLAQKSGDHRLAMLLSQLVGSQQ
VVELNVMQLVDWRNLQVDAFIQEERLKIYALLSATPVWQSSDKRSINVCSELDWKRALAV
HLWYMLPPTASISQALQQYETAFQESEEGTRYAAYPLPAYLEGHGLRLEAIDADTSAIKR
DVCFHLLKLYSDRCYDLRQLLDPRSVTPDPLDYRLSWHLWMVLQALNYTHLSEQSQGLLH
ASYTEQLENVGLWEWAIFVMLHVPNAVIRETSVRELLNRHCTLRETRETLTKEKFLIEKL
CIPAEWIYEAKAIRARRDEDHHREALYLLRAGHWNQCHRLVCRHLASDAIINENYSYLRS
FLDELSRPENCVHIQGWDTAGQVYMDYIGVIEMLNQIRQNESSGCELERLHMKVTSVCNR
VDQIQCCNSKDRLAQSEMAKRVANILRVVLRLQHSPESDDSELPRVPLRLLAPHIGRLPM
PEDYALEELHSLTQSYLRELTVGGQ
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaatccttcgcgactccttttggaggtggcactggagcttttggagcaaca
tcaactttcggccaaacagctcctggtttcggtacatcgactgctaccggcttcgggcct
tcaacctttgggacaataaacaacactggcggcctttttgggagcacccagaataaacca
ggtggactcttcgggaccggaaccttcaaccagacagcaaccccctccacaaacacaggg
tttggctttgggacatcaacgggtacgacaaactccctatttggggccacgaacacagga
agcggcctcttctcctctcagagcaatgcgttcggtcagacgaagccgtccaccttcagc
agttttgggacgggcacaaacagcactagcctttttggtagcacacaaaccactgcgaac
ccctttggaggaacgtcaagcacactttttggaacctctacgttctctgcagctccgtcc
ggaaccaccataaagttcaatgcaccttctggaacagacaccatggcaaagggcggtgtt
accacaaacatcagtaccaagcaccagtgcatcactgccatgaaggagtacgagagcaag
tcactggaggagctgcgtctggaagattatcaggccaacagaaaggggccccagaatccg
gtgggtgcagcgacaggtaccagcctatttggggcagccacagccacatcgagcgccccc
acaggcctgtttggcgccacaccctccagcagcaacttttcatttgggaacaaaaatgcc
tttggacaaactaccagcacctttggagcgaacacaggaggtctttttggccagcccgcc
gcccagccggccactagcttatttaataagccctttggccaagctaccaccacacagaac
accggcttttcattcggaaacacgaacacgctggggcaggcgagcacaatgggtctcttt
ggaagcactcaacccacccagtccaccggcctctttggcacttccaccagcactaatgca
ggatcggcgtttggagctggggctggtttgtttggacagactaacaccacgccgttcgga
ggtgttggaagttcgaccctgttcaataccaagccagctggatttgggacgaccacgacc
agcgcccctgcgtttggcaccggtaccggaggactcttcggtttcggcgccaataatacc
ggcagcagtctctttgggaataagaccgctccagggacacttggtgcaggccttggcacc
gcatttggacaaggtctgaacacgggccagacgtcactgtttgggagcaatcagccaaaa
cttggtggcacgcttggcacaggcgcctttggttctactgggtttaatgcagccaacaca
ggcctgggattcgggggtcctcaagctcctatggctttggctgatcccaacgcggcggcg
cagcagctggttcttcagcagcagctcactgctctggcctattctccatatggagactcg
cctctcttcagaaatcctatttcagacccaaagaagaaggaggagcgcctgaagcccact
aatccggcagcacagaaagcccttactacccccacacactacaagctcacccctcgccca
gctaccaaagtgcgccccaaagcactgcagaccgcgggaaccgcaaagacacaactgttc
gacgggttggacgatgatgagccgtctctgtccagcggagccttcatgcctaggaagagc
ataaagaaattggtgctgaaaaacctgaacatcagcaatctggcctcgccgtcccgtagc
gagcaggacgaggcgtcctctcctgccaggtacccggagaacgatgacggagtcaatgag
aggaacggccctgaagtggacggacacgaagtatccgaattctaccctcctcctccatca
aagctgctccctcagagtctggagaagaagcgcatgaacagcggtatggacgacaccatt
gtggcgctgaacatgcgcaacgctctcaggaacagcctggatggcagtgcagaggagagt
tccctcacagaggaggacatcctccatgatgtgccccctcaccctgccggcattgtgcta
acaagagaaggttactacacaatcccctccatggaggaactggccaagatgattgacgag
gacggaaagtgcattgtggaaggcttcactattggccgtcgaggttatggatctatctat
tttgaaggactggtcgacctgaccaacctgaacctggatgaaatagtccatgttcgaaat
aaggaggtgattgtgtatacagatgatgggaataagccgcctgtgggtgaagggctgaac
agggctgcggaggtgaccctgaatgaggtgtggccaatcgacaagaccacccgctccctg
ataaagagccctgagcggctggaagagatgaattataagagcaagctggaagccgcctcc
cgaaaacaaggggcccaatttaaggagtaccgtccagagacgggctcctgggtgttcaag
gtgaagcacttctccaagtacgggctgcaagactcggatgaggaagaggaagatgccaca
tccaccgctgaaacaaagaaaatgaaagcggctgccctcccccctcctggacagcagccg
ccccaacagcaggctgtactcaatgggagacctacccctccaccgcagagcctggcggag
gaggagctgggacgggcgttggagttggacagtgacatggcggacatcacccaggagccg
ctcctggattcagctgctgacgatcaggacatcacggaggagcaggagccggtgtctgca
tcatcccacatcgcatcgtccctgggggtcaaccctcacgccttacaggtgatgaaagct
tctctgctgttggaggatgagggtggtgatctcgtctccccctttgcctgcttccggccg
agcacccctcaggaggtccggtcaccgctgaggtttgtcccagcagcgcagtctccccgg
gcgtccagcggtcgtctgcagtccaggttctccggaccctcagttctgaaacagaaggac
tctccgcttctttctcagagccccaaacccccctcctccgctccgtggccggccctgggt
cctctctcttcagcgttcatgatgccgtctcctgttccggagacgcagctgagaacggtg
gggacccgtcgtcagcagggtctggtgccgctggacaagtccgtgtctgatggaaagggc
aagctgctgatcgacatgtctctgttcgtgggacgctccttctctgtgggctggggccag
aactggacgctggcccatagtggggacatgctgagtggggccagggagagggaggaggcc
gccgggaacatggagaccatggactacggatttcttcccaaaccggtctctgctaaatct
cttacagaaacccccttcaaggttcacctggagaagctgagtctggaggagaagcgaaca
gatctgcagtcctacctgattcctctagaaatcgccttgaaaaacagtacggtgcagagc
gagcgctgtccgcggcttgtgcccaaccctgggaactctgccatccacgactatgccgga
tgggtcggcgagttctgtgcggagcctgcacatgtggagcccgtggtgaagcagtggtgt
ttaacgtggacgctctgtaaggccctgtggggtcggctccgggagctggagaccgggctg
gatgacctgaatgagtatgtggagaggctgcaccgcaggaaggccttctctcattggctg
gccgagacggcggcggagcgcattgaagaggaggcggctctgcacctccatgagcgacca
gtcgaggccgtgttcagcttcctgaccggctgccgtattagcgaggcatgtcggctggct
cagaaatctggtgatcaccggctcgccatgttgctctctcagctggttggcagtcagcag
gttgtggagctcaatgtcatgcagctggtggactggagaaacctgcaggtggacgctttc
atccaggaggagcggttgaagatctatgccttgttgtcggccaccccggtgtggcagtca
tctgataagaggagcattaatgtctgctcggagctcgactggaagcgggcattggccgtt
cacctctggtacatgctgccacccacggcctccatctcccaggctttgcagcagtacgag
accgcctttcaggagtcagaggaaggcacacgatatgctgcttacccgctccctgcctac
ctcgaagggcacggcctccgtctagaagccatcgatgcagatacttccgctatcaagaga
gatgtctgcttccacctcctgaagctctacagcgacaggtgttatgatcttcggcagctc
ttggacccccggagcgtgaccccggaccccctggactaccgtctgagctggcatctgtgg
atggtcctgcaggcgctgaattacacgcacctctcggagcagagccaggggctgctgcac
gccagttacaccgagcagctggagaacgtgggcctctgggagtgggccatatttgtgatg
cttcacgtgcccaatgccgtcatccgagagacctcggtccgggagctgctgaacagacac
tgtaccctgagggagactcgcgagacgctgaccaaggagaagttcctgatagagaagctc
tgcatccctgccgaatggatctacgaagccaaagctatccgtgccaggagagatgaagac
caccacagggaggcgctctacttattacgggccggacactggaaccagtgccacaggctg
gtgtgccggcacctggcgtcagacgccatcatcaatgagaactactcctacctgcgcagc
ttcctggacgagctctcgcggccggagaactgtgtgcacatccagggctgggacacggcc
ggccaggtctacatggactacatcggcgtcatcgagatgctgaaccaaatccgacagaac
gaatcttccggctgtgaacttgaacgactgcacatgaaagtgacgtccgtctgcaaccgg
gtcgatcagatccaatgctgcaactccaaagatcggctggcgcagtctgaaatggcgaaa
cgcgtggcgaacatcctgcgcgtcgtcctgcgtctacagcactcccctgaatcggacgac
tctgagctcccgcgcgtccccctcagactgctcgccccccacattggccgattaccgatg
ccggaggactacgccctggaggagctgcacagcctcacccaatcctatctacgagaactc
accgtgggcggccagtag
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integrated database retrieval system
